RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 ZNF672Q499Z4 452 aaPredicted RBP12.55□□□□□ -0.4
NPLOC4-218ENST00000574964 USP51Q70EK9 711 aa12.55□□□□□ -0.4
NPLOC4-218ENST00000574964 KRT77Q7Z794 578 aa12.55□□□□□ -0.4
NPLOC4-218ENST00000574964 PAQR4Q8N4S7 273 aaPredicted RBP12.55□□□□□ -0.4
NPLOC4-218ENST00000574964 ST7LQ8TDW4 575 aa12.55□□□□□ -0.4
NPLOC4-218ENST00000574964 APH1BQ8WW43 257 aa12.55□□□□□ -0.4
NPLOC4-218ENST00000574964 IPCEF1Q8WWN9 437 aaPredicted RBP12.55□□□□□ -0.4
NPLOC4-218ENST00000574964 FBXW5Q969U6 566 aa12.55□□□□□ -0.4
NPLOC4-218ENST00000574964 C4orf45Q96LM5 186 aa12.55□□□□□ -0.4
NPLOC4-218ENST00000574964 DCLRE1CQ96SD1 692 aaKnown RBP12.55□□□□□ -0.4
NPLOC4-218ENST00000574964 TBX5Q99593 518 aa12.55□□□□□ -0.4
NPLOC4-218ENST00000574964 BCL2L14Q9BZR8 327 aa12.55□□□□□ -0.4
NPLOC4-218ENST00000574964 Q9H521 79 aa12.55□□□□□ -0.4
NPLOC4-218ENST00000574964 IKZF2Q9UKS7 526 aa12.55□□□□□ -0.4
NPLOC4-218ENST00000574964 PCDHGB1Q9Y5G3 927 aa12.55□□□□□ -0.4
NPLOC4-218ENST00000574964 A0A1W2PPR1 153 aa12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 E7EQL1 145 aa12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 HS3ST1O14792 307 aa12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 WBP4O75554 376 aaKnown RBP12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 DBHP09172 617 aa12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 OR2T7P0C7T2 308 aa12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 DBTP11182 482 aaKnown RBP12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 PRF1P14222 555 aa12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 PCSK6P29122 969 aa12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 GLRXP35754 106 aa12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 SLC6A9P48067 706 aa12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 FABP6P51161 128 aa12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 PRKXP51817 358 aa12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 UCP2P55851 309 aa12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 CXCR4P61073 352 aa12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 CDK5R2Q13319 367 aa12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 KLHL22Q53GT1 634 aa12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 ZNF283Q8N7M2 679 aa12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 NUP37Q8NFH4 326 aa12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 OR10S1Q8NGN2 331 aa12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 OR1J1Q8NGS3 322 aa12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 OR2T27Q8NH04 317 aa12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 ABHD4Q8TB40 342 aa12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 RNF133Q8WVZ7 376 aa12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 ASB17Q8WXJ9 295 aa12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 ZNF184Q99676 751 aaPredicted RBP12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 KCNJ15Q99712 375 aa12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 DHRS9Q9BPW9 319 aa12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 MROQ9BYG7 248 aa12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 TTTY10Q9BZA0 68 aa12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 PNRC2Q9NPJ4 139 aaKnown RBP12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 FAIMQ9NVQ4 179 aa12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 RAB26Q9ULW5 256 aa12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 EDARQ9UNE0 448 aa12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 N6AMT1Q9Y5N5 214 aa12.54□□□□□ -0.4
NPLOC4-218ENST00000574964 SPG11Q96JI7 2443 aa12.53□□□□□ -0.4
NPLOC4-218ENST00000574964 ARFGEF3Q5TH69 2177 aa12.53□□□□□ -0.4
NPLOC4-218ENST00000574964 IRGMA1A4Y4 181 aa12.53□□□□□ -0.4
NPLOC4-218ENST00000574964 M0R135 149 aa12.53□□□□□ -0.4
NPLOC4-218ENST00000574964 FAM20BO75063 409 aa12.53□□□□□ -0.4
NPLOC4-218ENST00000574964 FADS2O95864 444 aaKnown RBP12.53□□□□□ -0.4
NPLOC4-218ENST00000574964 APOC1P02654 83 aa12.53□□□□□ -0.4
NPLOC4-218ENST00000574964 LCATP04180 440 aa12.53□□□□□ -0.4
NPLOC4-218ENST00000574964 APOBEC3AP31941 199 aaPredicted RBP12.53□□□□□ -0.4
NPLOC4-218ENST00000574964 RGS6P49758 472 aa12.53□□□□□ -0.4
NPLOC4-218ENST00000574964 ACTC1P68032 377 aa12.53□□□□□ -0.4
NPLOC4-218ENST00000574964 ACTA1P68133 377 aa12.53□□□□□ -0.4
NPLOC4-218ENST00000574964 SMN1Q16637 294 aaKnown RBP12.53□□□□□ -0.4
NPLOC4-218ENST00000574964 RGS7BPQ6MZT1 257 aaPredicted RBP12.53□□□□□ -0.4
NPLOC4-218ENST00000574964 ZNF322Q6U7Q0 402 aaPredicted RBP12.53□□□□□ -0.4
NPLOC4-218ENST00000574964 LRRN1Q6UXK5 716 aa12.53□□□□□ -0.4
NPLOC4-218ENST00000574964 FBXL14Q8N1E6 418 aa12.53□□□□□ -0.4
NPLOC4-218ENST00000574964 LILRB1Q8NHL6 650 aaPredicted RBP12.53□□□□□ -0.4
NPLOC4-218ENST00000574964 LGALS12Q96DT0 336 aa12.53□□□□□ -0.4
NPLOC4-218ENST00000574964 ZNF799Q96GE5 643 aa12.53□□□□□ -0.4
NPLOC4-218ENST00000574964 CNBD2Q96M20 576 aa12.53□□□□□ -0.4
NPLOC4-218ENST00000574964 AMELYQ99218 206 aa12.53□□□□□ -0.4
NPLOC4-218ENST00000574964 CA10Q9NS85 328 aa12.53□□□□□ -0.4
NPLOC4-218ENST00000574964 DDX28Q9NUL7 540 aaKnown RBP12.53□□□□□ -0.4
NPLOC4-218ENST00000574964 TBCCD1Q9NVR7 557 aa12.53□□□□□ -0.4
NPLOC4-218ENST00000574964 COPS3Q9UNS2 423 aa12.53□□□□□ -0.4
NPLOC4-218ENST00000574964 KLHDC2Q9Y2U9 406 aa12.53□□□□□ -0.4
NPLOC4-218ENST00000574964 CMAHPQ9Y471 501 aa12.53□□□□□ -0.4
NPLOC4-218ENST00000574964 DAPL1A0PJW8 107 aa12.52□□□□□ -0.41
NPLOC4-218ENST00000574964 PSMD9O00233 223 aa12.52□□□□□ -0.41
NPLOC4-218ENST00000574964 SMPD2O60906 423 aa12.52□□□□□ -0.41
NPLOC4-218ENST00000574964 KRT8P05787 483 aa12.52□□□□□ -0.41
NPLOC4-218ENST00000574964 ACSM4P0C7M7 580 aa12.52□□□□□ -0.41
NPLOC4-218ENST00000574964 MYF6P23409 242 aa12.52□□□□□ -0.41
NPLOC4-218ENST00000574964 THBS4P35443 961 aa12.52□□□□□ -0.41
NPLOC4-218ENST00000574964 WNT5AP41221 380 aa12.52□□□□□ -0.41
NPLOC4-218ENST00000574964 RIDAP52758 137 aaKnown RBP12.52□□□□□ -0.41
NPLOC4-218ENST00000574964 NKX6-1P78426 367 aaPredicted RBP12.52□□□□□ -0.41
NPLOC4-218ENST00000574964 RAB40BQ12829 278 aa12.52□□□□□ -0.41
NPLOC4-218ENST00000574964 ZNF544Q6NX49 715 aa12.52□□□□□ -0.41
NPLOC4-218ENST00000574964 DRAM2Q6UX65 266 aa12.52□□□□□ -0.41
NPLOC4-218ENST00000574964 C20orf204Q6ZNR8 217 aa12.52□□□□□ -0.41
NPLOC4-218ENST00000574964 RHOUQ7L0Q8 258 aa12.52□□□□□ -0.41
NPLOC4-218ENST00000574964 C1orf174Q8IYL3 243 aa12.52□□□□□ -0.41
NPLOC4-218ENST00000574964 ZNF101Q8IZC7 436 aa12.52□□□□□ -0.41
NPLOC4-218ENST00000574964 ACBD7Q8N6N7 88 aa12.52□□□□□ -0.41
NPLOC4-218ENST00000574964 ZNF611Q8N823 705 aa12.52□□□□□ -0.41
NPLOC4-218ENST00000574964 BPIFB6Q8NFQ5 453 aa12.52□□□□□ -0.41
NPLOC4-218ENST00000574964 OR5L1Q8NGL2 311 aa12.52□□□□□ -0.41
NPLOC4-218ENST00000574964 SNX33Q8WV41 574 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms