RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 SMCO3A2RU48 225 aa8.65□□□□□ -1.03
CCDC40-212ENST00000574799 CD8AP01732 235 aa8.65□□□□□ -1.03
CCDC40-212ENST00000574799 HTR2CP28335 458 aa8.65□□□□□ -1.03
CCDC40-212ENST00000574799 LTBRP36941 435 aa8.65□□□□□ -1.03
CCDC40-212ENST00000574799 SULT1A1P50225 295 aa8.65□□□□□ -1.03
CCDC40-212ENST00000574799 CDK3Q00526 305 aa8.65□□□□□ -1.03
CCDC40-212ENST00000574799 TFF2Q03403 129 aa8.65□□□□□ -1.03
CCDC40-212ENST00000574799 ARFRP1Q13795 201 aa8.65□□□□□ -1.03
CCDC40-212ENST00000574799 NNATQ16517 81 aa8.65□□□□□ -1.03
CCDC40-212ENST00000574799 DEFB134Q4QY38 66 aa8.65□□□□□ -1.03
CCDC40-212ENST00000574799 C4orf17Q53FE4 359 aa8.65□□□□□ -1.03
CCDC40-212ENST00000574799 NKAIN2Q5VXU1 208 aa8.65□□□□□ -1.03
CCDC40-212ENST00000574799 SLC48A1Q6P1K1 146 aa8.65□□□□□ -1.03
CCDC40-212ENST00000574799 ULK3Q6PHR2 472 aa8.65□□□□□ -1.03
CCDC40-212ENST00000574799 SLC35D2Q76EJ3 337 aa8.65□□□□□ -1.03
CCDC40-212ENST00000574799 ZNF101Q8IZC7 436 aa8.65□□□□□ -1.03
CCDC40-212ENST00000574799 SUMF2Q8NBJ7 301 aa8.65□□□□□ -1.03
CCDC40-212ENST00000574799 PBDC1Q9BVG4 233 aa8.65□□□□□ -1.03
CCDC40-212ENST00000574799 TMEM106CQ9BVX2 250 aa8.65□□□□□ -1.03
CCDC40-212ENST00000574799 NKX2-4Q9H2Z4 354 aa8.65□□□□□ -1.03
CCDC40-212ENST00000574799 OR1A2Q9Y585 309 aa8.65□□□□□ -1.03
CCDC40-212ENST00000574799 KNL1Q8NG31 2342 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 SLC31A2O15432 143 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 TBX19O60806 448 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 KAT7O95251 611 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 ITGB2P05107 769 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 QDPRP09417 244 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 CTXN1P60606 82 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 ACTR1AP61163 376 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 CSNK1G2P78368 415 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 REEP5Q00765 189 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 NR0B2Q15466 257 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 ZNHIT3Q15649 155 aaPredicted RBP8.64□□□□□ -1.03
CCDC40-212ENST00000574799 ITPRIPL2Q3MIP1 535 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 AWAT2Q6E213 333 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 TMPRSS11FQ6ZWK6 438 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 UBE3DQ7Z6J8 389 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 OR51A4Q8NGJ6 313 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 CCDC74AQ96AQ1 378 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 ELF4Q99607 663 aaPredicted RBP8.64□□□□□ -1.03
CCDC40-212ENST00000574799 HAO2Q9NYQ3 351 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 PRR13Q9NZ81 148 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 MED19A0JLT2 244 aaPredicted RBP8.64□□□□□ -1.03
CCDC40-212ENST00000574799 ZNF587BE7ETH6 402 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 MFNGO00587 321 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 XKRYO14609 159 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 KLF4O43474 513 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 ADAP1O75689 374 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 KNG1P01042 644 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 MBP02144 154 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 CD74P04233 296 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 ACKR3P25106 362 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 CD1CP29017 333 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 LPAR6P43657 344 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 DCDP81605 110 aaKnown RBP8.64□□□□□ -1.03
CCDC40-212ENST00000574799 MLC1Q15049 377 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 CSRP2Q16527 193 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 NSUN5P2Q63ZY6 315 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 METRNLQ641Q3 311 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 PPP1R3BQ86XI6 285 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 OR2L13Q8N349 312 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 TMEM229BQ8NBD8 167 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 MARCH1Q8TCQ1 289 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 CXorf40AQ8TE69 158 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 SLC25A44Q96H78 314 aaPredicted RBP8.64□□□□□ -1.03
CCDC40-212ENST00000574799 ZNF587Q96SQ5 575 aaPredicted RBP8.64□□□□□ -1.03
CCDC40-212ENST00000574799 PRSS27Q9BQR3 290 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 GRHPRQ9UBQ7 328 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 ZNF726A6NNF4 738 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 K7EPK0 472 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 RDH16O75452 317 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 PLGP00747 810 aaPredicted RBP8.64□□□□□ -1.03
CCDC40-212ENST00000574799 RENP00797 406 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 F13BP05160 661 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 NID1P14543 1247 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 RCC1P18754 421 aaPredicted RBP8.64□□□□□ -1.03
CCDC40-212ENST00000574799 DDTP30046 118 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 PEBP1P30086 187 aaKnown RBP8.64□□□□□ -1.03
CCDC40-212ENST00000574799 CSNK1EP49674 416 aaKnown RBP8.64□□□□□ -1.03
CCDC40-212ENST00000574799 NPY4RP50391 375 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 SURF2Q15527 256 aaPredicted RBP8.64□□□□□ -1.03
CCDC40-212ENST00000574799 MIDNQ504T8 468 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 FAM71E2Q8N5Q1 922 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 GATSQ8NAP1 163 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 OR2L5Q8NG80 312 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 OR2L3Q8NG85 312 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 ROBO4Q8WZ75 1007 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 GTF3AQ92664 365 aaKnown RBP8.64□□□□□ -1.03
CCDC40-212ENST00000574799 DPEP2Q9H4A9 486 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 KCNIP3Q9Y2W7 256 aa8.64□□□□□ -1.03
CCDC40-212ENST00000574799 EML2O95834 649 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 OR8U9P0C7N5 309 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 WASP42768 502 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 AFF3P51826 1226 aaKnown RBP8.63□□□□□ -1.03
CCDC40-212ENST00000574799 CLDN6P56747 220 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 GAMTQ14353 236 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 EXOSC7Q15024 291 aaKnown RBP8.63□□□□□ -1.03
CCDC40-212ENST00000574799 GUK1Q16774 197 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 PYY3Q5JQD4 70 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 TMEM244Q5VVB8 128 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms