RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 ALOX5APP20292 161 aa11.75□□□□□ -0.53
NDE1-209ENST00000574109 APEX1P27695 318 aaKnown RBP11.75□□□□□ -0.53
NDE1-209ENST00000574109 HSD11B1P28845 292 aa11.75□□□□□ -0.53
NDE1-209ENST00000574109 OTX1P32242 354 aaPredicted RBP11.75□□□□□ -0.53
NDE1-209ENST00000574109 RAD52P43351 418 aa11.75□□□□□ -0.53
NDE1-209ENST00000574109 TPTEP56180 551 aa11.75□□□□□ -0.53
NDE1-209ENST00000574109 CXCR4P61073 352 aa11.75□□□□□ -0.53
NDE1-209ENST00000574109 ACTA2P62736 377 aa11.75□□□□□ -0.53
NDE1-209ENST00000574109 ACTG2P63267 376 aa11.75□□□□□ -0.53
NDE1-209ENST00000574109 ROM1Q03395 351 aa11.75□□□□□ -0.53
NDE1-209ENST00000574109 EGR3Q06889 387 aa11.75□□□□□ -0.53
NDE1-209ENST00000574109 TAF13Q15543 124 aa11.75□□□□□ -0.53
NDE1-209ENST00000574109 CORO6Q6QEF8 472 aa11.75□□□□□ -0.53
NDE1-209ENST00000574109 MYPOPQ86VE0 399 aaPredicted RBP11.75□□□□□ -0.53
NDE1-209ENST00000574109 CPEB3Q8NE35 698 aaKnown RBP11.75□□□□□ -0.53
NDE1-209ENST00000574109 CNIH3Q8TBE1 160 aa11.75□□□□□ -0.53
NDE1-209ENST00000574109 HAVCR2Q8TDQ0 301 aa11.75□□□□□ -0.53
NDE1-209ENST00000574109 MS4A3Q96HJ5 214 aa11.75□□□□□ -0.53
NDE1-209ENST00000574109 MAP6Q96JE9 813 aa11.75□□□□□ -0.53
NDE1-209ENST00000574109 C1QTNF6Q9BXI9 259 aa11.75□□□□□ -0.53
NDE1-209ENST00000574109 MROQ9BYG7 248 aa11.75□□□□□ -0.53
NDE1-209ENST00000574109 ZNF442Q9H7R0 627 aa11.75□□□□□ -0.53
NDE1-209ENST00000574109 PNRC2Q9NPJ4 139 aaKnown RBP11.75□□□□□ -0.53
NDE1-209ENST00000574109 BLOC1S6Q9UL45 172 aa11.75□□□□□ -0.53
NDE1-209ENST00000574109 ABCA12Q86UK0 2595 aa11.75□□□□□ -0.53
NDE1-209ENST00000574109 DSCAMO60469 2012 aa11.74□□□□□ -0.53
NDE1-209ENST00000574109 SHISA9B4DS77 424 aa11.74□□□□□ -0.53
NDE1-209ENST00000574109 ATP6V1G2-DDX39BF2Z307 99 aa11.74□□□□□ -0.53
NDE1-209ENST00000574109 M0R135 149 aa11.74□□□□□ -0.53
NDE1-209ENST00000574109 H2BFMP0C1H6 154 aa11.74□□□□□ -0.53
NDE1-209ENST00000574109 DCTDP32321 178 aa11.74□□□□□ -0.53
NDE1-209ENST00000574109 OPRL1P41146 370 aa11.74□□□□□ -0.53
NDE1-209ENST00000574109 RPS27P42677 84 aaKnown RBP11.74□□□□□ -0.53
NDE1-209ENST00000574109 CDK5R2Q13319 367 aa11.74□□□□□ -0.53
NDE1-209ENST00000574109 ZNF829Q3KNS6 432 aaPredicted RBP11.74□□□□□ -0.53
NDE1-209ENST00000574109 KRTAP27-1Q3LI81 207 aa11.74□□□□□ -0.53
NDE1-209ENST00000574109 ZNF672Q499Z4 452 aaPredicted RBP11.74□□□□□ -0.53
NDE1-209ENST00000574109 ZNF544Q6NX49 715 aa11.74□□□□□ -0.53
NDE1-209ENST00000574109 DRAM2Q6UX65 266 aa11.74□□□□□ -0.53
NDE1-209ENST00000574109 C20orf204Q6ZNR8 217 aa11.74□□□□□ -0.53
NDE1-209ENST00000574109 ZNF679Q8IYX0 411 aa11.74□□□□□ -0.53
NDE1-209ENST00000574109 ACBD7Q8N6N7 88 aa11.74□□□□□ -0.53
NDE1-209ENST00000574109 KBTBD8Q8NFY9 601 aa11.74□□□□□ -0.53
NDE1-209ENST00000574109 THEM6Q8WUY1 208 aa11.74□□□□□ -0.53
NDE1-209ENST00000574109 UBE2FQ969M7 185 aa11.74□□□□□ -0.53
NDE1-209ENST00000574109 FBXW5Q969U6 566 aa11.74□□□□□ -0.53
NDE1-209ENST00000574109 ZNF799Q96GE5 643 aa11.74□□□□□ -0.53
NDE1-209ENST00000574109 KCNJ15Q99712 375 aa11.74□□□□□ -0.53
NDE1-209ENST00000574109 JAM3Q9BX67 310 aa11.74□□□□□ -0.53
NDE1-209ENST00000574109 OPA3Q9H6K4 179 aa11.74□□□□□ -0.53
NDE1-209ENST00000574109 MOB1AQ9H8S9 216 aa11.74□□□□□ -0.53
NDE1-209ENST00000574109 PLCXD1Q9NUJ7 323 aa11.74□□□□□ -0.53
NDE1-209ENST00000574109 TBCCD1Q9NVR7 557 aa11.74□□□□□ -0.53
NDE1-209ENST00000574109 EXOGQ9Y2C4 368 aaKnown RBP11.74□□□□□ -0.53
NDE1-209ENST00000574109 FLNBO75369 2602 aaKnown RBP11.73□□□□□ -0.53
NDE1-209ENST00000574109 HS3ST1O14792 307 aa11.73□□□□□ -0.53
NDE1-209ENST00000574109 SMPD2O60906 423 aa11.73□□□□□ -0.53
NDE1-209ENST00000574109 IGHA1P01876 353 aa11.73□□□□□ -0.53
NDE1-209ENST00000574109 KRT8P05787 483 aa11.73□□□□□ -0.53
NDE1-209ENST00000574109 CCDC159P0C7I6 412 aa11.73□□□□□ -0.53
NDE1-209ENST00000574109 NR4A1P22736 598 aa11.73□□□□□ -0.53
NDE1-209ENST00000574109 COL8A1P27658 744 aa11.73□□□□□ -0.53
NDE1-209ENST00000574109 DCKP27707 260 aa11.73□□□□□ -0.53
NDE1-209ENST00000574109 CALCRP30988 508 aa11.73□□□□□ -0.53
NDE1-209ENST00000574109 PSMA6P60900 246 aaKnown RBP11.73□□□□□ -0.53
NDE1-209ENST00000574109 SPOCK1Q08629 439 aa11.73□□□□□ -0.53
NDE1-209ENST00000574109 DBPQ10586 325 aaPredicted RBP11.73□□□□□ -0.53
NDE1-209ENST00000574109 SNTB2Q13425 540 aaKnown RBP11.73□□□□□ -0.53
NDE1-209ENST00000574109 TMEM154Q6P9G4 183 aa11.73□□□□□ -0.53
NDE1-209ENST00000574109 ZNF322Q6U7Q0 402 aaPredicted RBP11.73□□□□□ -0.53
NDE1-209ENST00000574109 B3GLCTQ6Y288 498 aa11.73□□□□□ -0.53
NDE1-209ENST00000574109 PLEKHG7Q6ZR37 379 aa11.73□□□□□ -0.53
NDE1-209ENST00000574109 FAM220AQ7Z4H9 259 aa11.73□□□□□ -0.53
NDE1-209ENST00000574109 KRT77Q7Z794 578 aa11.73□□□□□ -0.53
NDE1-209ENST00000574109 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.73□□□□□ -0.53
NDE1-209ENST00000574109 OR10H4Q8NGA5 316 aa11.73□□□□□ -0.53
NDE1-209ENST00000574109 OR5L1Q8NGL2 311 aa11.73□□□□□ -0.53
NDE1-209ENST00000574109 OR10S1Q8NGN2 331 aa11.73□□□□□ -0.53
NDE1-209ENST00000574109 APOBEC3DQ96AK3 386 aaPredicted RBP11.73□□□□□ -0.53
NDE1-209ENST00000574109 LGALS12Q96DT0 336 aa11.73□□□□□ -0.53
NDE1-209ENST00000574109 HS3ST6Q96QI5 342 aa11.73□□□□□ -0.53
NDE1-209ENST00000574109 OR8B4Q96RC9 309 aa11.73□□□□□ -0.53
NDE1-209ENST00000574109 DOK1Q99704 481 aa11.73□□□□□ -0.53
NDE1-209ENST00000574109 CENPMQ9NSP4 180 aa11.73□□□□□ -0.53
NDE1-209ENST00000574109 SCN3BQ9NY72 215 aa11.73□□□□□ -0.53
NDE1-209ENST00000574109 ZNF391Q9UJN7 358 aa11.73□□□□□ -0.53
NDE1-209ENST00000574109 TACC2O95359 2948 aa11.73□□□□□ -0.53
NDE1-209ENST00000574109 APCP25054 2843 aa11.72□□□□□ -0.53
NDE1-209ENST00000574109 LOC100509620A0A075B734 347 aa11.72□□□□□ -0.53
NDE1-209ENST00000574109 SLC1A7O00341 560 aa11.72□□□□□ -0.53
NDE1-209ENST00000574109 DENRO43583 198 aaKnown RBP11.72□□□□□ -0.53
NDE1-209ENST00000574109 FAM20BO75063 409 aa11.72□□□□□ -0.53
NDE1-209ENST00000574109 SULT1C4O75897 302 aa11.72□□□□□ -0.53
NDE1-209ENST00000574109 ACSM4P0C7M7 580 aa11.72□□□□□ -0.53
NDE1-209ENST00000574109 PSKH1P11801 424 aa11.72□□□□□ -0.53
NDE1-209ENST00000574109 MYL12AP19105 171 aa11.72□□□□□ -0.53
NDE1-209ENST00000574109 CCNOP22674 350 aa11.72□□□□□ -0.53
NDE1-209ENST00000574109 GLRXP35754 106 aa11.72□□□□□ -0.53
NDE1-209ENST00000574109 SLC6A9P48067 706 aa11.72□□□□□ -0.53
NDE1-209ENST00000574109 RIDAP52758 137 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms