RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 IGLV1-44P01699 117 aa11.48□□□□□ -0.57
CCDC40-205ENST00000571028 CD8AP01732 235 aa11.48□□□□□ -0.57
CCDC40-205ENST00000571028 CRYAAP02489 173 aa11.48□□□□□ -0.57
CCDC40-205ENST00000571028 SERPINA5P05154 406 aa11.48□□□□□ -0.57
CCDC40-205ENST00000571028 ZNF14P17017 642 aaPredicted RBP11.48□□□□□ -0.57
CCDC40-205ENST00000571028 GSTT1P30711 240 aa11.48□□□□□ -0.57
CCDC40-205ENST00000571028 CALCRP30988 508 aa11.48□□□□□ -0.57
CCDC40-205ENST00000571028 APLNRP35414 380 aa11.48□□□□□ -0.57
CCDC40-205ENST00000571028 CDC42P60953 191 aa11.48□□□□□ -0.57
CCDC40-205ENST00000571028 LSM6P62312 80 aaKnown RBP11.48□□□□□ -0.57
CCDC40-205ENST00000571028 AQP6Q13520 282 aa11.48□□□□□ -0.57
CCDC40-205ENST00000571028 APOFQ13790 326 aa11.48□□□□□ -0.57
CCDC40-205ENST00000571028 OGFRL1Q5TC84 451 aaPredicted RBP11.48□□□□□ -0.57
CCDC40-205ENST00000571028 DPPA2Q7Z7J5 298 aa11.48□□□□□ -0.57
CCDC40-205ENST00000571028 ERI1Q8IV48 349 aaKnown RBP11.48□□□□□ -0.57
CCDC40-205ENST00000571028 SLC30A7Q8NEW0 376 aa11.48□□□□□ -0.57
CCDC40-205ENST00000571028 OR6N2Q8NGY6 317 aa11.48□□□□□ -0.57
CCDC40-205ENST00000571028 TMEM163Q8TC26 289 aa11.48□□□□□ -0.57
CCDC40-205ENST00000571028 PLEK2Q9NYT0 353 aa11.48□□□□□ -0.57
CCDC40-205ENST00000571028 CRNNQ9UBG3 495 aaPredicted RBP11.48□□□□□ -0.57
CCDC40-205ENST00000571028 AASSQ9UDR5 926 aa11.48□□□□□ -0.57
CCDC40-205ENST00000571028 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.47□□□□□ -0.57
CCDC40-205ENST00000571028 IGHV2OR16-5A0A0B4J2B6 119 aa11.47□□□□□ -0.57
CCDC40-205ENST00000571028 SHISA9B4DS77 424 aa11.47□□□□□ -0.57
CCDC40-205ENST00000571028 ZNF593O00488 134 aaPredicted RBP11.47□□□□□ -0.57
CCDC40-205ENST00000571028 CASQ2O14958 399 aaPredicted RBP11.47□□□□□ -0.57
CCDC40-205ENST00000571028 GLCEO94923 617 aa11.47□□□□□ -0.57
CCDC40-205ENST00000571028 ATP6V1G2O95670 118 aa11.47□□□□□ -0.57
CCDC40-205ENST00000571028 MRPL3P09001 348 aaKnown RBP11.47□□□□□ -0.57
CCDC40-205ENST00000571028 CSF3P09919 207 aa11.47□□□□□ -0.57
CCDC40-205ENST00000571028 PAX7P23759 505 aa11.47□□□□□ -0.57
CCDC40-205ENST00000571028 CFPP27918 469 aa11.47□□□□□ -0.57
CCDC40-205ENST00000571028 GGT2P36268 569 aa11.47□□□□□ -0.57
CCDC40-205ENST00000571028 NAA10P41227 235 aaPredicted RBP11.47□□□□□ -0.57
CCDC40-205ENST00000571028 HTR5AP47898 357 aa11.47□□□□□ -0.57
CCDC40-205ENST00000571028 GDI2P50395 445 aaKnown RBP11.47□□□□□ -0.57
CCDC40-205ENST00000571028 SCRN3Q0VDG4 424 aa11.47□□□□□ -0.57
CCDC40-205ENST00000571028 KCNMB1Q16558 191 aa11.47□□□□□ -0.57
CCDC40-205ENST00000571028 TBC1D28Q2M2D7 210 aa11.47□□□□□ -0.57
CCDC40-205ENST00000571028 C1QTNF12Q5T7M4 302 aa11.47□□□□□ -0.57
CCDC40-205ENST00000571028 KRT80Q6KB66 452 aa11.47□□□□□ -0.57
CCDC40-205ENST00000571028 SPATC1Q76KD6 591 aa11.47□□□□□ -0.57
CCDC40-205ENST00000571028 ZNF584Q8IVC4 421 aa11.47□□□□□ -0.57
CCDC40-205ENST00000571028 ALDH16A1Q8IZ83 802 aa11.47□□□□□ -0.57
CCDC40-205ENST00000571028 RFLNBQ8N5W9 214 aa11.47□□□□□ -0.57
CCDC40-205ENST00000571028 CPEB3Q8NE35 698 aaKnown RBP11.47□□□□□ -0.57
CCDC40-205ENST00000571028 ZNF75AQ96N20 296 aa11.47□□□□□ -0.57
CCDC40-205ENST00000571028 INTS14Q96SY0 518 aa11.47□□□□□ -0.57
CCDC40-205ENST00000571028 VCXQ9H320 206 aa11.47□□□□□ -0.57
CCDC40-205ENST00000571028 MOV10Q9HCE1 1003 aaKnown RBP11.47□□□□□ -0.57
CCDC40-205ENST00000571028 FAM118AQ9NWS6 357 aa11.47□□□□□ -0.57
CCDC40-205ENST00000571028 DNAJC27Q9NZQ0 273 aa11.47□□□□□ -0.57
CCDC40-205ENST00000571028 LHFPL6Q9Y693 200 aa11.47□□□□□ -0.57
CCDC40-205ENST00000571028 COMMD3-BMI1R4GMX3 469 aa11.47□□□□□ -0.57
CCDC40-205ENST00000571028 LOC100130705A0A1B0GUX0 176 aa11.46□□□□□ -0.57
CCDC40-205ENST00000571028 C5orf49A4QMS7 147 aa11.46□□□□□ -0.57
CCDC40-205ENST00000571028 KCNAB3O43448 404 aa11.46□□□□□ -0.57
CCDC40-205ENST00000571028 SELENOFO60613 162 aa11.46□□□□□ -0.57
CCDC40-205ENST00000571028 PTHP01270 115 aa11.46□□□□□ -0.57
CCDC40-205ENST00000571028 FAM157BP0CG42 384 aa11.46□□□□□ -0.57
CCDC40-205ENST00000571028 PSKH1P11801 424 aa11.46□□□□□ -0.57
CCDC40-205ENST00000571028 BMP4P12644 408 aa11.46□□□□□ -0.57
CCDC40-205ENST00000571028 STOMP27105 288 aa11.46□□□□□ -0.57
CCDC40-205ENST00000571028 ENTPD1P49961 510 aa11.46□□□□□ -0.57
CCDC40-205ENST00000571028 GALK2Q01415 458 aa11.46□□□□□ -0.57
CCDC40-205ENST00000571028 EIF2B1Q14232 305 aaKnown RBP11.46□□□□□ -0.57
CCDC40-205ENST00000571028 GGTLC2Q14390 218 aa11.46□□□□□ -0.57
CCDC40-205ENST00000571028 CCDC92Q53HC0 331 aaPredicted RBP11.46□□□□□ -0.57
CCDC40-205ENST00000571028 LINC01590Q5TEZ4 76 aa11.46□□□□□ -0.57
CCDC40-205ENST00000571028 CFAP77Q6ZQR2 320 aa11.46□□□□□ -0.57
CCDC40-205ENST00000571028 FBXL14Q8N1E6 418 aa11.46□□□□□ -0.57
CCDC40-205ENST00000571028 PAQR4Q8N4S7 273 aaPredicted RBP11.46□□□□□ -0.57
CCDC40-205ENST00000571028 PACRGLQ8N7B6 248 aa11.46□□□□□ -0.57
CCDC40-205ENST00000571028 FAM169BQ8N8A8 192 aa11.46□□□□□ -0.57
CCDC40-205ENST00000571028 OR1J2Q8NGS2 313 aa11.46□□□□□ -0.57
CCDC40-205ENST00000571028 NRG4Q8WWG1 115 aa11.46□□□□□ -0.57
CCDC40-205ENST00000571028 SLC7A6Q92536 515 aa11.46□□□□□ -0.57
CCDC40-205ENST00000571028 HRASLS5Q96KN8 279 aa11.46□□□□□ -0.57
CCDC40-205ENST00000571028 PITX2Q99697 317 aa11.46□□□□□ -0.57
CCDC40-205ENST00000571028 CENPMQ9NSP4 180 aa11.46□□□□□ -0.57
CCDC40-205ENST00000571028 CBLN4Q9NTU7 201 aa11.46□□□□□ -0.57
CCDC40-205ENST00000571028 FBXL3Q9UKT7 428 aa11.46□□□□□ -0.57
CCDC40-205ENST00000571028 MEGF8Q7Z7M0 2845 aa11.45□□□□□ -0.58
CCDC40-205ENST00000571028 LOC100509620A0A075B734 347 aa11.45□□□□□ -0.58
CCDC40-205ENST00000571028 CCDC182A6NF36 153 aa11.45□□□□□ -0.58
CCDC40-205ENST00000571028 E7EQL1 145 aa11.45□□□□□ -0.58
CCDC40-205ENST00000571028 DLGAP1O14490 977 aa11.45□□□□□ -0.58
CCDC40-205ENST00000571028 PRODHO43272 600 aa11.45□□□□□ -0.58
CCDC40-205ENST00000571028 CLIC3O95833 236 aa11.45□□□□□ -0.58
CCDC40-205ENST00000571028 FABP6P51161 128 aa11.45□□□□□ -0.58
CCDC40-205ENST00000571028 BLVRAP53004 296 aa11.45□□□□□ -0.58
CCDC40-205ENST00000571028 HCCSP53701 268 aa11.45□□□□□ -0.58
CCDC40-205ENST00000571028 HGFACQ04756 655 aa11.45□□□□□ -0.58
CCDC40-205ENST00000571028 LCN1P1Q5VSP4 162 aa11.45□□□□□ -0.58
CCDC40-205ENST00000571028 AADACL4Q5VUY2 407 aa11.45□□□□□ -0.58
CCDC40-205ENST00000571028 SLC18B1Q6NT16 456 aa11.45□□□□□ -0.58
CCDC40-205ENST00000571028 MEPCEQ7L2J0 689 aaKnown RBP11.45□□□□□ -0.58
CCDC40-205ENST00000571028 VASH1Q7L8A9 365 aaPredicted RBP11.45□□□□□ -0.58
CCDC40-205ENST00000571028 DCXRQ7Z4W1 244 aa11.45□□□□□ -0.58
CCDC40-205ENST00000571028 SYT9Q86SS6 491 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms