RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 EGFL6Q8IUX8 553 aa13.45□□□□□ -0.26
HERPUD1-219ENST00000570273 ZFP41Q8N8Y5 198 aa13.45□□□□□ -0.26
HERPUD1-219ENST00000570273 WDR31Q8NA23 367 aa13.45□□□□□ -0.26
HERPUD1-219ENST00000570273 OR1F12Q8NHA8 337 aa13.45□□□□□ -0.26
HERPUD1-219ENST00000570273 UFD1Q92890 307 aa13.45□□□□□ -0.26
HERPUD1-219ENST00000570273 S100PBPQ96BU1 408 aa13.45□□□□□ -0.26
HERPUD1-219ENST00000570273 BOD1Q96IK1 185 aa13.45□□□□□ -0.26
HERPUD1-219ENST00000570273 COQ7Q99807 217 aa13.45□□□□□ -0.26
HERPUD1-219ENST00000570273 HDHD5Q9BXW7 423 aa13.45□□□□□ -0.26
HERPUD1-219ENST00000570273 ACTR6Q9GZN1 396 aa13.45□□□□□ -0.26
HERPUD1-219ENST00000570273 ISYNA1Q9NPH2 558 aa13.45□□□□□ -0.26
HERPUD1-219ENST00000570273 OBP2BQ9NPH6 170 aa13.45□□□□□ -0.26
HERPUD1-219ENST00000570273 B3GNT2Q9NY97 397 aa13.45□□□□□ -0.26
HERPUD1-219ENST00000570273 GTF2A1LQ9UNN4 478 aa13.45□□□□□ -0.26
HERPUD1-219ENST00000570273 AMDHD2Q9Y303 409 aa13.45□□□□□ -0.26
HERPUD1-219ENST00000570273 HELZ2Q9BYK8 2649 aaKnown RBP13.44□□□□□ -0.26
HERPUD1-219ENST00000570273 PNMA8CA0A1B0GUJ8 204 aa13.44□□□□□ -0.26
HERPUD1-219ENST00000570273 OR6C6A6NF89 314 aa13.44□□□□□ -0.26
HERPUD1-219ENST00000570273 CCKARP32238 428 aa13.44□□□□□ -0.26
HERPUD1-219ENST00000570273 PRKXP51817 358 aa13.44□□□□□ -0.26
HERPUD1-219ENST00000570273 GTF2A1P52655 376 aaPredicted RBP13.44□□□□□ -0.26
HERPUD1-219ENST00000570273 BDH1Q02338 343 aa13.44□□□□□ -0.26
HERPUD1-219ENST00000570273 PLP2Q04941 152 aa13.44□□□□□ -0.26
HERPUD1-219ENST00000570273 ACSM1Q08AH1 577 aa13.44□□□□□ -0.26
HERPUD1-219ENST00000570273 ECH1Q13011 328 aa13.44□□□□□ -0.26
HERPUD1-219ENST00000570273 RHOUQ7L0Q8 258 aa13.44□□□□□ -0.26
HERPUD1-219ENST00000570273 GPR141Q7Z602 305 aa13.44□□□□□ -0.26
HERPUD1-219ENST00000570273 ALDH16A1Q8IZ83 802 aa13.44□□□□□ -0.26
HERPUD1-219ENST00000570273 ZNF283Q8N7M2 679 aa13.44□□□□□ -0.26
HERPUD1-219ENST00000570273 LILRB4Q8NHJ6 448 aa13.44□□□□□ -0.26
HERPUD1-219ENST00000570273 HAVCR2Q8TDQ0 301 aa13.44□□□□□ -0.26
HERPUD1-219ENST00000570273 CA5BP1Q8WTZ4 195 aa13.44□□□□□ -0.26
HERPUD1-219ENST00000570273 NIPAL2Q9H841 368 aa13.44□□□□□ -0.26
HERPUD1-219ENST00000570273 ATPIF1Q9UII2 106 aa13.44□□□□□ -0.26
HERPUD1-219ENST00000570273 R4GMQ9 66 aa13.44□□□□□ -0.26
HERPUD1-219ENST00000570273 TENM4Q6N022 2769 aa13.43□□□□□ -0.26
HERPUD1-219ENST00000570273 GCN1Q92616 2671 aaKnown RBP13.43□□□□□ -0.26
HERPUD1-219ENST00000570273 ESPL1Q14674 2120 aa13.43□□□□□ -0.26
HERPUD1-219ENST00000570273 IQCMA0A1B0GVH7 501 aa13.43□□□□□ -0.26
HERPUD1-219ENST00000570273 NKX2-6A6NCS4 301 aa13.43□□□□□ -0.26
HERPUD1-219ENST00000570273 C16orf97H3BN30 126 aa13.43□□□□□ -0.26
HERPUD1-219ENST00000570273 PLA2G2AP14555 144 aa13.43□□□□□ -0.26
HERPUD1-219ENST00000570273 UGT2B10P36537 528 aa13.43□□□□□ -0.26
HERPUD1-219ENST00000570273 TGM4P49221 684 aa13.43□□□□□ -0.26
HERPUD1-219ENST00000570273 CX3CR1P49238 355 aa13.43□□□□□ -0.26
HERPUD1-219ENST00000570273 PSMA6P60900 246 aaKnown RBP13.43□□□□□ -0.26
HERPUD1-219ENST00000570273 GALK2Q01415 458 aa13.43□□□□□ -0.26
HERPUD1-219ENST00000570273 MFGE8Q08431 387 aaPredicted RBP13.43□□□□□ -0.26
HERPUD1-219ENST00000570273 TIMM23BQ5SRD1 257 aa13.43□□□□□ -0.26
HERPUD1-219ENST00000570273 LIPKQ5VXJ0 399 aa13.43□□□□□ -0.26
HERPUD1-219ENST00000570273 ZNF544Q6NX49 715 aa13.43□□□□□ -0.26
HERPUD1-219ENST00000570273 ARL9Q6T311 187 aa13.43□□□□□ -0.26
HERPUD1-219ENST00000570273 SATL1Q86VE3 508 aa13.43□□□□□ -0.26
HERPUD1-219ENST00000570273 OR13F1Q8NGS4 319 aa13.43□□□□□ -0.26
HERPUD1-219ENST00000570273 SLC7A6Q92536 515 aa13.43□□□□□ -0.26
HERPUD1-219ENST00000570273 SPTSSAQ969W0 71 aa13.43□□□□□ -0.26
HERPUD1-219ENST00000570273 TMIGD2Q96BF3 282 aa13.43□□□□□ -0.26
HERPUD1-219ENST00000570273 LRRC46Q96FV0 321 aa13.43□□□□□ -0.26
HERPUD1-219ENST00000570273 KCNJ15Q99712 375 aa13.43□□□□□ -0.26
HERPUD1-219ENST00000570273 ST6GALNAC2Q9UJ37 374 aa13.43□□□□□ -0.26
HERPUD1-219ENST00000570273 F5H5K5 113 aa13.42□□□□□ -0.26
HERPUD1-219ENST00000570273 LOC110117498-PIK3R3F6TDL0 507 aa13.42□□□□□ -0.26
HERPUD1-219ENST00000570273 M0R135 149 aa13.42□□□□□ -0.26
HERPUD1-219ENST00000570273 AGFG2O95081 481 aa13.42□□□□□ -0.26
HERPUD1-219ENST00000570273 DBHP09172 617 aa13.42□□□□□ -0.26
HERPUD1-219ENST00000570273 CELP19835 753 aa13.42□□□□□ -0.26
HERPUD1-219ENST00000570273 CRYGSP22914 178 aa13.42□□□□□ -0.26
HERPUD1-219ENST00000570273 APEX1P27695 318 aaKnown RBP13.42□□□□□ -0.26
HERPUD1-219ENST00000570273 DCTDP32321 178 aa13.42□□□□□ -0.26
HERPUD1-219ENST00000570273 APLNRP35414 380 aa13.42□□□□□ -0.26
HERPUD1-219ENST00000570273 LIPAP38571 399 aa13.42□□□□□ -0.26
HERPUD1-219ENST00000570273 CDK5R1Q15078 307 aa13.42□□□□□ -0.26
HERPUD1-219ENST00000570273 CCDC58Q4VC31 144 aa13.42□□□□□ -0.26
HERPUD1-219ENST00000570273 RPL22L1Q6P5R6 122 aaKnown RBP13.42□□□□□ -0.26
HERPUD1-219ENST00000570273 P2RY8Q86VZ1 359 aa13.42□□□□□ -0.26
HERPUD1-219ENST00000570273 CPEB3Q8NE35 698 aaKnown RBP13.42□□□□□ -0.26
HERPUD1-219ENST00000570273 HSD17B8Q92506 261 aa13.42□□□□□ -0.26
HERPUD1-219ENST00000570273 ZNF799Q96GE5 643 aa13.42□□□□□ -0.26
HERPUD1-219ENST00000570273 DOK1Q99704 481 aa13.42□□□□□ -0.26
HERPUD1-219ENST00000570273 BRD7Q9NPI1 651 aa13.42□□□□□ -0.26
HERPUD1-219ENST00000570273 SLC25A15Q9Y619 301 aa13.42□□□□□ -0.26
HERPUD1-219ENST00000570273 SIRT4Q9Y6E7 314 aaPredicted RBP13.42□□□□□ -0.26
HERPUD1-219ENST00000570273 MYO7BQ6PIF6 2116 aa13.42□□□□□ -0.26
HERPUD1-219ENST00000570273 TMEM269A0A1B0GVZ9 245 aa13.41□□□□□ -0.26
HERPUD1-219ENST00000570273 CCRL2O00421 344 aa13.41□□□□□ -0.26
HERPUD1-219ENST00000570273 ZG16O60844 167 aa13.41□□□□□ -0.26
HERPUD1-219ENST00000570273 APOC1P02654 83 aa13.41□□□□□ -0.26
HERPUD1-219ENST00000570273 ANXA2P07355 339 aaKnown RBP13.41□□□□□ -0.26
HERPUD1-219ENST00000570273 COX5BP10606 129 aa13.41□□□□□ -0.26
HERPUD1-219ENST00000570273 CBR1P16152 277 aa13.41□□□□□ -0.26
HERPUD1-219ENST00000570273 CPEP16870 476 aa13.41□□□□□ -0.26
HERPUD1-219ENST00000570273 SLC6A9P48067 706 aa13.41□□□□□ -0.26
HERPUD1-219ENST00000570273 GDI2P50395 445 aaKnown RBP13.41□□□□□ -0.26
HERPUD1-219ENST00000570273 IDH3GP51553 393 aaPredicted RBP13.41□□□□□ -0.26
HERPUD1-219ENST00000570273 TPTEP56180 551 aa13.41□□□□□ -0.26
HERPUD1-219ENST00000570273 ZNF121P58317 390 aaPredicted RBP13.41□□□□□ -0.26
HERPUD1-219ENST00000570273 TPBGQ13641 420 aa13.41□□□□□ -0.26
HERPUD1-219ENST00000570273 ALKBH1Q13686 389 aaKnown RBP13.41□□□□□ -0.26
HERPUD1-219ENST00000570273 PPA1Q15181 289 aa13.41□□□□□ -0.26
HERPUD1-219ENST00000570273 SSX1Q16384 188 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms