RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 HIST2H3AQ71DI3 136 aa11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 DHFR2Q86XF0 187 aa11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 ZDHHC21Q8IVQ6 265 aa11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 ZNF283Q8N7M2 679 aa11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 ZDHHC22Q8N966 263 aa11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 DEFB108BQ8NET1 73 aa11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 OR4M2Q8NGB6 313 aa11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 OR52J3Q8NH60 311 aa11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 ITLN1Q8WWA0 313 aa11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 C22orf15Q8WYQ4 148 aa11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 DVL3Q92997 716 aaPredicted RBP11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 TIMD4Q96H15 378 aa11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 DCLRE1CQ96SD1 692 aaKnown RBP11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 RERGLQ9H628 205 aa11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 ELOVL3Q9HB03 270 aa11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 CYSLTR2Q9NS75 346 aa11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 TMEM106BQ9NUM4 274 aa11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 AURKCQ9UQB9 309 aa11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 NPTNQ9Y639 398 aa11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 TRAPPC2LH3BP13 241 aa11.65□□□□□ -0.54
GTF3C1-211ENST00000569653 XKRYO14609 159 aa11.65□□□□□ -0.54
GTF3C1-211ENST00000569653 AHCYL1O43865 530 aa11.65□□□□□ -0.54
GTF3C1-211ENST00000569653 KHDRBS3O75525 346 aaKnown RBP11.65□□□□□ -0.54
GTF3C1-211ENST00000569653 PPP1R3DO95685 299 aa11.65□□□□□ -0.54
GTF3C1-211ENST00000569653 ARHGDIAP52565 204 aa11.65□□□□□ -0.54
GTF3C1-211ENST00000569653 MS4A2Q01362 244 aa11.65□□□□□ -0.54
GTF3C1-211ENST00000569653 AQP6Q13520 282 aa11.65□□□□□ -0.54
GTF3C1-211ENST00000569653 TRIM25Q14258 630 aaKnown RBP11.65□□□□□ -0.54
GTF3C1-211ENST00000569653 KCNMB1Q16558 191 aa11.65□□□□□ -0.54
GTF3C1-211ENST00000569653 KLF17Q5JT82 389 aaPredicted RBP11.65□□□□□ -0.54
GTF3C1-211ENST00000569653 C1orf94Q6P1W5 598 aa11.65□□□□□ -0.54
GTF3C1-211ENST00000569653 CORO6Q6QEF8 472 aa11.65□□□□□ -0.54
GTF3C1-211ENST00000569653 ZER1Q7Z7L7 766 aa11.65□□□□□ -0.54
GTF3C1-211ENST00000569653 PEG10Q86TG7 708 aaKnown RBP11.65□□□□□ -0.54
GTF3C1-211ENST00000569653 GLB1L2Q8IW92 636 aa11.65□□□□□ -0.54
GTF3C1-211ENST00000569653 OR5AS1Q8N127 324 aa11.65□□□□□ -0.54
GTF3C1-211ENST00000569653 NPEPL1Q8NDH3 523 aa11.65□□□□□ -0.54
GTF3C1-211ENST00000569653 OR2Z1Q8NG97 314 aa11.65□□□□□ -0.54
GTF3C1-211ENST00000569653 OR1F12Q8NHA8 337 aa11.65□□□□□ -0.54
GTF3C1-211ENST00000569653 ZFAND2BQ8WV99 257 aa11.65□□□□□ -0.54
GTF3C1-211ENST00000569653 CCDC124Q96CT7 223 aaKnown RBP11.65□□□□□ -0.54
GTF3C1-211ENST00000569653 HAVCR1Q96D42 359 aa11.65□□□□□ -0.54
GTF3C1-211ENST00000569653 ASB9Q96DX5 294 aa11.65□□□□□ -0.54
GTF3C1-211ENST00000569653 TRIM15Q9C019 465 aa11.65□□□□□ -0.54
GTF3C1-211ENST00000569653 EGLN1Q9GZT9 426 aa11.65□□□□□ -0.54
GTF3C1-211ENST00000569653 MAGIXQ9H6Y5 334 aa11.65□□□□□ -0.54
GTF3C1-211ENST00000569653 PLEK2Q9NYT0 353 aa11.65□□□□□ -0.54
GTF3C1-211ENST00000569653 PTTG3PQ9NZH4 202 aa11.65□□□□□ -0.54
GTF3C1-211ENST00000569653 CGGBP1Q9UFW8 167 aaPredicted RBP11.65□□□□□ -0.54
GTF3C1-211ENST00000569653 PCDHB10Q9UN67 800 aa11.65□□□□□ -0.54
GTF3C1-211ENST00000569653 IGHV3-64DA0A0J9YX35 117 aa11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 UNC119BA6NIH7 251 aa11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 F5H0A9 414 aaPredicted RBP11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 H0YL77 283 aa11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 J3QLI3 93 aa11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 MLNRO43193 412 aa11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 SBK2P0C263 348 aa11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 PSKH1P11801 424 aa11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 ANPEPP15144 967 aa11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 SELEP16581 610 aa11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 RRM2P31350 389 aa11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 IFNGR2P38484 337 aa11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 LIPAP38571 399 aa11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 MMP16P51512 607 aa11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 LSM6P62312 80 aaKnown RBP11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 KRTAP27-1Q3LI81 207 aa11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 DNAL1Q4LDG9 190 aa11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 GPR139Q6DWJ6 353 aa11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 PGM2L1Q6PCE3 622 aa11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 CFAP77Q6ZQR2 320 aa11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 USP43Q70EL4 1123 aa11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 C1orf174Q8IYL3 243 aa11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 OR10AD1Q8NGE0 317 aa11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 ZNF418Q8TF45 676 aaPredicted RBP11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 FAM216AQ8WUB2 273 aa11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 LRGUKQ96M69 825 aa11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 C1orf147Q96MC9 270 aaPredicted RBP11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 DIRC2Q96SL1 478 aa11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 BTBD10Q9BSF8 475 aa11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 WACQ9BTA9 647 aa11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 C7orf69Q9H7B7 122 aa11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 TMCC3Q9ULS5 477 aa11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 TRRAPQ9Y4A5 3859 aa11.64□□□□□ -0.55
GTF3C1-211ENST00000569653 TMEM89A2RUT3 159 aa11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 GYG2O15488 501 aa11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 OR10H3O60404 316 aa11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 KRT36O76013 467 aa11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 ZNF205O95201 554 aa11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 GSTM3P21266 225 aa11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 PMELP40967 661 aa11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 GUCA1AP43080 201 aaPredicted RBP11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 MAGEA2P43356 314 aa11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 COMPP49747 757 aaPredicted RBP11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 BTG1P62324 171 aa11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 HOXA4Q00056 320 aaPredicted RBP11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 FAM98BQ52LJ0 330 aaKnown RBP11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 OR2T2Q6IF00 324 aa11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 UNQ6126/PRO20091Q6UXV3 157 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms