RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 C6orf141Q5SZD1 244 aa13.92□□□□□ -0.18
USB1-215ENST00000569252 SLC22A25Q6T423 547 aa13.92□□□□□ -0.18
USB1-215ENST00000569252 KRT77Q7Z794 578 aa13.92□□□□□ -0.18
USB1-215ENST00000569252 APH1BQ8WW43 257 aa13.92□□□□□ -0.18
USB1-215ENST00000569252 IPCEF1Q8WWN9 437 aaPredicted RBP13.92□□□□□ -0.18
USB1-215ENST00000569252 SLAMF6Q96DU3 332 aa13.92□□□□□ -0.18
USB1-215ENST00000569252 COQ7Q99807 217 aa13.92□□□□□ -0.18
USB1-215ENST00000569252 ATF6BQ99941 703 aa13.92□□□□□ -0.18
USB1-215ENST00000569252 COPS4Q9BT78 406 aa13.92□□□□□ -0.18
USB1-215ENST00000569252 MROQ9BYG7 248 aa13.92□□□□□ -0.18
USB1-215ENST00000569252 WNT5BQ9H1J7 359 aa13.92□□□□□ -0.18
USB1-215ENST00000569252 ADGRL4Q9HBW9 690 aa13.92□□□□□ -0.18
USB1-215ENST00000569252 TPRKBQ9Y3C4 175 aa13.92□□□□□ -0.18
USB1-215ENST00000569252 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.91□□□□□ -0.18
USB1-215ENST00000569252 ZNF503-AS2A6NEH8 195 aa13.91□□□□□ -0.18
USB1-215ENST00000569252 EFCAB10A6NFE3 127 aa13.91□□□□□ -0.18
USB1-215ENST00000569252 ZNF878C9JN71 531 aa13.91□□□□□ -0.18
USB1-215ENST00000569252 F5H5K5 113 aa13.91□□□□□ -0.18
USB1-215ENST00000569252 ABCD4O14678 606 aa13.91□□□□□ -0.18
USB1-215ENST00000569252 WBP4O75554 376 aaKnown RBP13.91□□□□□ -0.18
USB1-215ENST00000569252 IGLV1-44P01699 117 aa13.91□□□□□ -0.18
USB1-215ENST00000569252 CECR9P0C854 216 aa13.91□□□□□ -0.18
USB1-215ENST00000569252 ZNF14P17017 642 aaPredicted RBP13.91□□□□□ -0.18
USB1-215ENST00000569252 HCCSP53701 268 aa13.91□□□□□ -0.18
USB1-215ENST00000569252 TPTEP56180 551 aa13.91□□□□□ -0.18
USB1-215ENST00000569252 CXCR4P61073 352 aa13.91□□□□□ -0.18
USB1-215ENST00000569252 GRB2P62993 217 aaKnown RBP13.91□□□□□ -0.18
USB1-215ENST00000569252 BSPH1Q075Z2 132 aa13.91□□□□□ -0.18
USB1-215ENST00000569252 SMN1Q16637 294 aaKnown RBP13.91□□□□□ -0.18
USB1-215ENST00000569252 KRTAP21-3Q3LHN1 58 aa13.91□□□□□ -0.18
USB1-215ENST00000569252 CCDC92Q53HC0 331 aaPredicted RBP13.91□□□□□ -0.18
USB1-215ENST00000569252 NCMAPQ5T1S8 102 aa13.91□□□□□ -0.18
USB1-215ENST00000569252 SPATC1Q76KD6 591 aa13.91□□□□□ -0.18
USB1-215ENST00000569252 RHOUQ7L0Q8 258 aa13.91□□□□□ -0.18
USB1-215ENST00000569252 VASH1Q7L8A9 365 aaPredicted RBP13.91□□□□□ -0.18
USB1-215ENST00000569252 CDC20BQ86Y33 519 aa13.91□□□□□ -0.18
USB1-215ENST00000569252 STX19Q8N4C7 294 aa13.91□□□□□ -0.18
USB1-215ENST00000569252 ZNF540Q8NDQ6 660 aa13.91□□□□□ -0.18
USB1-215ENST00000569252 CPEB3Q8NE35 698 aaKnown RBP13.91□□□□□ -0.18
USB1-215ENST00000569252 OR4F15Q8NGB8 312 aa13.91□□□□□ -0.18
USB1-215ENST00000569252 SNX33Q8WV41 574 aa13.91□□□□□ -0.18
USB1-215ENST00000569252 DCLRE1CQ96SD1 692 aaKnown RBP13.91□□□□□ -0.18
USB1-215ENST00000569252 ABHD6Q9BV23 337 aa13.91□□□□□ -0.18
USB1-215ENST00000569252 SP140LQ9H930 580 aa13.91□□□□□ -0.18
USB1-215ENST00000569252 NPAP1Q9NZP6 1156 aa13.91□□□□□ -0.18
USB1-215ENST00000569252 BLOC1S6Q9UL45 172 aa13.91□□□□□ -0.18
USB1-215ENST00000569252 EXOGQ9Y2C4 368 aaKnown RBP13.91□□□□□ -0.18
USB1-215ENST00000569252 DPRXA6NFQ7 191 aa13.9□□□□□ -0.18
USB1-215ENST00000569252 A6NNC1 897 aa13.9□□□□□ -0.18
USB1-215ENST00000569252 APOL3O95236 402 aa13.9□□□□□ -0.18
USB1-215ENST00000569252 CELA3BP08861 270 aa13.9□□□□□ -0.18
USB1-215ENST00000569252 TACSTD2P09758 323 aa13.9□□□□□ -0.18
USB1-215ENST00000569252 CD99P14209 185 aa13.9□□□□□ -0.18
USB1-215ENST00000569252 MYL12AP19105 171 aa13.9□□□□□ -0.18
USB1-215ENST00000569252 ALOX5APP20292 161 aa13.9□□□□□ -0.18
USB1-215ENST00000569252 RAD52P43351 418 aa13.9□□□□□ -0.18
USB1-215ENST00000569252 HIST1H3AP68431 136 aa13.9□□□□□ -0.18
USB1-215ENST00000569252 NAAAQ02083 359 aa13.9□□□□□ -0.18
USB1-215ENST00000569252 HIST2H3PS2Q5TEC6 136 aa13.9□□□□□ -0.18
USB1-215ENST00000569252 CFAP77Q6ZQR2 320 aa13.9□□□□□ -0.18
USB1-215ENST00000569252 HIST2H3AQ71DI3 136 aa13.9□□□□□ -0.18
USB1-215ENST00000569252 ACBD7Q8N6N7 88 aa13.9□□□□□ -0.18
USB1-215ENST00000569252 SMAP2Q8WU79 429 aaPredicted RBP13.9□□□□□ -0.18
USB1-215ENST00000569252 MYDGFQ969H8 173 aa13.9□□□□□ -0.18
USB1-215ENST00000569252 LGALS12Q96DT0 336 aa13.9□□□□□ -0.18
USB1-215ENST00000569252 TMEM80Q96HE8 168 aa13.9□□□□□ -0.18
USB1-215ENST00000569252 MS4A3Q96HJ5 214 aa13.9□□□□□ -0.18
USB1-215ENST00000569252 MAP6Q96JE9 813 aa13.9□□□□□ -0.18
USB1-215ENST00000569252 TBX5Q99593 518 aa13.9□□□□□ -0.18
USB1-215ENST00000569252 TMUB1Q9BVT8 246 aa13.9□□□□□ -0.18
USB1-215ENST00000569252 ELOVL3Q9HB03 270 aa13.9□□□□□ -0.18
USB1-215ENST00000569252 NOX3Q9HBY0 568 aa13.9□□□□□ -0.18
USB1-215ENST00000569252 INPP5EQ9NRR6 644 aa13.9□□□□□ -0.18
USB1-215ENST00000569252 PLCXD1Q9NUJ7 323 aa13.9□□□□□ -0.18
USB1-215ENST00000569252 MRPS18AQ9NVS2 196 aaKnown RBP13.9□□□□□ -0.18
USB1-215ENST00000569252 ATPIF1Q9UII2 106 aa13.9□□□□□ -0.18
USB1-215ENST00000569252 IKZF2Q9UKS7 526 aa13.9□□□□□ -0.18
USB1-215ENST00000569252 GRIP1Q9Y3R0 1128 aa13.9□□□□□ -0.18
USB1-215ENST00000569252 RNF115Q9Y4L5 304 aa13.9□□□□□ -0.18
USB1-215ENST00000569252 ATP23Q9Y6H3 246 aa13.9□□□□□ -0.18
USB1-215ENST00000569252 PTGES3LE9PB15 166 aa13.89□□□□□ -0.19
USB1-215ENST00000569252 SYNGR3O43761 229 aa13.89□□□□□ -0.19
USB1-215ENST00000569252 ZNF254O75437 659 aa13.89□□□□□ -0.19
USB1-215ENST00000569252 KRT8P05787 483 aa13.89□□□□□ -0.19
USB1-215ENST00000569252 DCKP27707 260 aa13.89□□□□□ -0.19
USB1-215ENST00000569252 EGR3Q06889 387 aa13.89□□□□□ -0.19
USB1-215ENST00000569252 RBM48Q5RL73 367 aaKnown RBP13.89□□□□□ -0.19
USB1-215ENST00000569252 DEGS2Q6QHC5 323 aa13.89□□□□□ -0.19
USB1-215ENST00000569252 ZNF322Q6U7Q0 402 aaPredicted RBP13.89□□□□□ -0.19
USB1-215ENST00000569252 SEZ6L2Q6UXD5 910 aa13.89□□□□□ -0.19
USB1-215ENST00000569252 PLEKHG7Q6ZR37 379 aa13.89□□□□□ -0.19
USB1-215ENST00000569252 Q71RC1 249 aaPredicted RBP13.89□□□□□ -0.19
USB1-215ENST00000569252 ZNF584Q8IVC4 421 aa13.89□□□□□ -0.19
USB1-215ENST00000569252 C1orf174Q8IYL3 243 aa13.89□□□□□ -0.19
USB1-215ENST00000569252 ZNF786Q8N393 782 aa13.89□□□□□ -0.19
USB1-215ENST00000569252 OR5L1Q8NGL2 311 aa13.89□□□□□ -0.19
USB1-215ENST00000569252 FBLIM1Q8WUP2 373 aa13.89□□□□□ -0.19
USB1-215ENST00000569252 KCNJ15Q99712 375 aa13.89□□□□□ -0.19
USB1-215ENST00000569252 NIPAL2Q9H841 368 aa13.89□□□□□ -0.19
USB1-215ENST00000569252 CNOT2Q9NZN8 540 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms