RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 TOX4O94842 621 aa10.34□□□□□ -0.75
SNX29-207ENST00000568949 IGHV1-69P01742 117 aa10.34□□□□□ -0.75
SNX29-207ENST00000568949 IGHV4-59P01825 116 aa10.34□□□□□ -0.75
SNX29-207ENST00000568949 OPN1MWP04001 364 aa10.34□□□□□ -0.75
SNX29-207ENST00000568949 OPN1MW2P0DN77 364 aa10.34□□□□□ -0.75
SNX29-207ENST00000568949 OPN1MW3P0DN78 364 aa10.34□□□□□ -0.75
SNX29-207ENST00000568949 PSMB10P40306 273 aa10.34□□□□□ -0.75
SNX29-207ENST00000568949 HTR5AP47898 357 aa10.34□□□□□ -0.75
SNX29-207ENST00000568949 ERFP50548 548 aa10.34□□□□□ -0.75
SNX29-207ENST00000568949 STX1BP61266 288 aa10.34□□□□□ -0.75
SNX29-207ENST00000568949 LAPTM4AQ15012 233 aa10.34□□□□□ -0.75
SNX29-207ENST00000568949 FAM201AQ5SY85 155 aa10.34□□□□□ -0.75
SNX29-207ENST00000568949 LYPD2Q6UXB3 125 aa10.34□□□□□ -0.75
SNX29-207ENST00000568949 FBXW12Q6X9E4 464 aa10.34□□□□□ -0.75
SNX29-207ENST00000568949 VASH1Q7L8A9 365 aaPredicted RBP10.34□□□□□ -0.75
SNX29-207ENST00000568949 PATL1Q86TB9 770 aaKnown RBP10.34□□□□□ -0.75
SNX29-207ENST00000568949 PCYOX1LQ8NBM8 494 aa10.34□□□□□ -0.75
SNX29-207ENST00000568949 OR8G5Q8NG78 346 aa10.34□□□□□ -0.75
SNX29-207ENST00000568949 OR10AD1Q8NGE0 317 aa10.34□□□□□ -0.75
SNX29-207ENST00000568949 PFN4Q8NHR9 129 aa10.34□□□□□ -0.75
SNX29-207ENST00000568949 LRTOMTQ8WZ04 291 aa10.34□□□□□ -0.75
SNX29-207ENST00000568949 WDFY2Q96P53 400 aa10.34□□□□□ -0.75
SNX29-207ENST00000568949 CPPED1Q9BRF8 314 aaPredicted RBP10.34□□□□□ -0.75
SNX29-207ENST00000568949 DPAGT1Q9H3H5 408 aa10.34□□□□□ -0.75
SNX29-207ENST00000568949 POLE4Q9NR33 117 aa10.34□□□□□ -0.75
SNX29-207ENST00000568949 A0A1W2PPL8 197 aa10.33□□□□□ -0.76
SNX29-207ENST00000568949 SGCEO43556 437 aa10.33□□□□□ -0.76
SNX29-207ENST00000568949 DOK2O60496 412 aa10.33□□□□□ -0.76
SNX29-207ENST00000568949 IRF2P14316 349 aa10.33□□□□□ -0.76
SNX29-207ENST00000568949 PMELP40967 661 aa10.33□□□□□ -0.76
SNX29-207ENST00000568949 RPL27P61353 136 aaKnown RBP10.33□□□□□ -0.76
SNX29-207ENST00000568949 TOP3AQ13472 1001 aaPredicted RBP10.33□□□□□ -0.76
SNX29-207ENST00000568949 FAM189A2Q15884 450 aa10.33□□□□□ -0.76
SNX29-207ENST00000568949 ALG10Q5BKT4 473 aa10.33□□□□□ -0.76
SNX29-207ENST00000568949 MOGAT3Q86VF5 341 aa10.33□□□□□ -0.76
SNX29-207ENST00000568949 OR5AS1Q8N127 324 aa10.33□□□□□ -0.76
SNX29-207ENST00000568949 CLDN22Q8N7P3 220 aa10.33□□□□□ -0.76
SNX29-207ENST00000568949 PPP1R14AQ96A00 147 aa10.33□□□□□ -0.76
SNX29-207ENST00000568949 RASD2Q96D21 266 aa10.33□□□□□ -0.76
SNX29-207ENST00000568949 ZNF582Q96NG8 517 aaPredicted RBP10.33□□□□□ -0.76
SNX29-207ENST00000568949 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.33□□□□□ -0.76
SNX29-207ENST00000568949 C20orf141Q9NUB4 165 aa10.33□□□□□ -0.76
SNX29-207ENST00000568949 HIF3AQ9Y2N7 669 aa10.33□□□□□ -0.76
SNX29-207ENST00000568949 A0A1B0GWJ7 208 aa10.32□□□□□ -0.76
SNX29-207ENST00000568949 A6NIZ1 184 aa10.32□□□□□ -0.76
SNX29-207ENST00000568949 POLR3GO15318 223 aaPredicted RBP10.32□□□□□ -0.76
SNX29-207ENST00000568949 PRB2P02812 416 aaPredicted RBP10.32□□□□□ -0.76
SNX29-207ENST00000568949 SCG5P05408 212 aa10.32□□□□□ -0.76
SNX29-207ENST00000568949 FUT4P22083 530 aa10.32□□□□□ -0.76
SNX29-207ENST00000568949 GATA4P43694 442 aa10.32□□□□□ -0.76
SNX29-207ENST00000568949 RGS6P49758 472 aa10.32□□□□□ -0.76
SNX29-207ENST00000568949 LOXL3P58215 753 aa10.32□□□□□ -0.76
SNX29-207ENST00000568949 RAP1BP61224 184 aa10.32□□□□□ -0.76
SNX29-207ENST00000568949 RAP1AP62834 184 aa10.32□□□□□ -0.76
SNX29-207ENST00000568949 METTL11BQ5VVY1 283 aa10.32□□□□□ -0.76
SNX29-207ENST00000568949 DHRS7BQ6IAN0 325 aaPredicted RBP10.32□□□□□ -0.76
SNX29-207ENST00000568949 OR2T2Q6IF00 324 aa10.32□□□□□ -0.76
SNX29-207ENST00000568949 NKAIN4Q8IVV8 208 aa10.32□□□□□ -0.76
SNX29-207ENST00000568949 CELF2-AS1Q8N7Q2 184 aa10.32□□□□□ -0.76
SNX29-207ENST00000568949 PNLDC1Q8NA58 520 aaKnown RBP10.32□□□□□ -0.76
SNX29-207ENST00000568949 OR5L1Q8NGL2 311 aa10.32□□□□□ -0.76
SNX29-207ENST00000568949 Q8TCH9 128 aa10.32□□□□□ -0.76
SNX29-207ENST00000568949 TMEM255BQ8WV15 326 aa10.32□□□□□ -0.76
SNX29-207ENST00000568949 TMEM239Q8WW34 195 aa10.32□□□□□ -0.76
SNX29-207ENST00000568949 STON2Q8WXE9 905 aa10.32□□□□□ -0.76
SNX29-207ENST00000568949 ERGIC1Q969X5 290 aa10.32□□□□□ -0.76
SNX29-207ENST00000568949 ZBTB9Q96C00 473 aa10.32□□□□□ -0.76
SNX29-207ENST00000568949 POLR2J2Q9GZM3 115 aaKnown RBP10.32□□□□□ -0.76
SNX29-207ENST00000568949 SIRPDQ9H106 197 aa10.32□□□□□ -0.76
SNX29-207ENST00000568949 POLR2J3Q9H1A7 115 aaKnown RBP10.32□□□□□ -0.76
SNX29-207ENST00000568949 CCDC167Q9P0B6 97 aa10.32□□□□□ -0.76
SNX29-207ENST00000568949 ERVK-18Q9QC07 812 aa10.32□□□□□ -0.76
SNX29-207ENST00000568949 MED31Q9Y3C7 131 aa10.32□□□□□ -0.76
SNX29-207ENST00000568949 A0A0U1RQK1 487 aa10.31□□□□□ -0.76
SNX29-207ENST00000568949 ZNF816-ZNF321PA0A0X1KG74 233 aa10.31□□□□□ -0.76
SNX29-207ENST00000568949 HTR3EA5X5Y0 456 aa10.31□□□□□ -0.76
SNX29-207ENST00000568949 IQCF6A8MYZ5 107 aa10.31□□□□□ -0.76
SNX29-207ENST00000568949 F5H5P2 479 aa10.31□□□□□ -0.76
SNX29-207ENST00000568949 MLNRO43193 412 aa10.31□□□□□ -0.76
SNX29-207ENST00000568949 KCNJ8Q15842 424 aa10.31□□□□□ -0.76
SNX29-207ENST00000568949 CYP51A1Q16850 503 aa10.31□□□□□ -0.76
SNX29-207ENST00000568949 C1orf94Q6P1W5 598 aa10.31□□□□□ -0.76
SNX29-207ENST00000568949 EPGNQ6UW88 154 aa10.31□□□□□ -0.76
SNX29-207ENST00000568949 DLEU7Q6UYE1 221 aa10.31□□□□□ -0.76
SNX29-207ENST00000568949 GALNT4Q8N4A0 578 aa10.31□□□□□ -0.76
SNX29-207ENST00000568949 SCCPDHQ8NBX0 429 aa10.31□□□□□ -0.76
SNX29-207ENST00000568949 OR11L1Q8NGX0 322 aa10.31□□□□□ -0.76
SNX29-207ENST00000568949 MRAPQ8TCY5 172 aa10.31□□□□□ -0.76
SNX29-207ENST00000568949 SLC26A7Q8TE54 656 aa10.31□□□□□ -0.76
SNX29-207ENST00000568949 RASSF5Q8WWW0 418 aa10.31□□□□□ -0.76
SNX29-207ENST00000568949 LHX4Q969G2 390 aa10.31□□□□□ -0.76
SNX29-207ENST00000568949 TAMM41Q96BW9 452 aa10.31□□□□□ -0.76
SNX29-207ENST00000568949 TECTBQ96PL2 329 aa10.31□□□□□ -0.76
SNX29-207ENST00000568949 RABEP2Q9H5N1 569 aa10.31□□□□□ -0.76
SNX29-207ENST00000568949 EMC7Q9NPA0 242 aa10.31□□□□□ -0.76
SNX29-207ENST00000568949 PTTG3PQ9NZH4 202 aa10.31□□□□□ -0.76
SNX29-207ENST00000568949 TMCC3Q9ULS5 477 aa10.31□□□□□ -0.76
SNX29-207ENST00000568949 USH1CQ9Y6N9 552 aa10.31□□□□□ -0.76
SNX29-207ENST00000568949 IGHV3-64DA0A0J9YX35 117 aa10.3□□□□□ -0.76
SNX29-207ENST00000568949 BTBD17A6NE02 478 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms