RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 PRKCDQ05655 676 aa13.14□□□□□ -0.31
HERPUD1-215ENST00000568676 HNRNPA0Q13151 305 aaKnown RBP13.14□□□□□ -0.31
HERPUD1-215ENST00000568676 AGBL2Q5U5Z8 902 aa13.14□□□□□ -0.31
HERPUD1-215ENST00000568676 METTL21CQ5VZV1 264 aa13.14□□□□□ -0.31
HERPUD1-215ENST00000568676 CD276Q5ZPR3 534 aa13.14□□□□□ -0.31
HERPUD1-215ENST00000568676 IGFN1Q86VF2 1251 aa13.14□□□□□ -0.31
HERPUD1-215ENST00000568676 JAZF1Q86VZ6 243 aa13.14□□□□□ -0.31
HERPUD1-215ENST00000568676 OR51A7Q8NH64 312 aa13.14□□□□□ -0.31
HERPUD1-215ENST00000568676 OR1F12Q8NHA8 337 aa13.14□□□□□ -0.31
HERPUD1-215ENST00000568676 ZNF420Q8TAQ5 688 aaPredicted RBP13.14□□□□□ -0.31
HERPUD1-215ENST00000568676 SSMEM1Q8WWF3 244 aa13.14□□□□□ -0.31
HERPUD1-215ENST00000568676 DYRK2Q92630 601 aa13.14□□□□□ -0.31
HERPUD1-215ENST00000568676 APOBEC3DQ96AK3 386 aaPredicted RBP13.14□□□□□ -0.31
HERPUD1-215ENST00000568676 SIKE1Q9BRV8 207 aa13.14□□□□□ -0.31
HERPUD1-215ENST00000568676 VWFP04275 2813 aa13.13□□□□□ -0.31
HERPUD1-215ENST00000568676 TRAV27A0A087WT01 109 aa13.13□□□□□ -0.31
HERPUD1-215ENST00000568676 MDFIC2A0A1B0GVS7 189 aa13.13□□□□□ -0.31
HERPUD1-215ENST00000568676 A0A1B0GWJ7 208 aa13.13□□□□□ -0.31
HERPUD1-215ENST00000568676 PRSS37A4D1T9 235 aa13.13□□□□□ -0.31
HERPUD1-215ENST00000568676 IQCF6A8MYZ5 107 aa13.13□□□□□ -0.31
HERPUD1-215ENST00000568676 EFCAB9A8MZ26 197 aa13.13□□□□□ -0.31
HERPUD1-215ENST00000568676 P2RY10O00398 339 aa13.13□□□□□ -0.31
HERPUD1-215ENST00000568676 TNFRSF13BO14836 293 aaPredicted RBP13.13□□□□□ -0.31
HERPUD1-215ENST00000568676 PIP5K1CO60331 668 aa13.13□□□□□ -0.31
HERPUD1-215ENST00000568676 SHOX2O60902 331 aaPredicted RBP13.13□□□□□ -0.31
HERPUD1-215ENST00000568676 SCG5P05408 212 aa13.13□□□□□ -0.31
HERPUD1-215ENST00000568676 CD14P08571 375 aa13.13□□□□□ -0.31
HERPUD1-215ENST00000568676 SELEP16581 610 aa13.13□□□□□ -0.31
HERPUD1-215ENST00000568676 GATA4P43694 442 aa13.13□□□□□ -0.31
HERPUD1-215ENST00000568676 FGF12P61328 243 aa13.13□□□□□ -0.31
HERPUD1-215ENST00000568676 KCNJ8Q15842 424 aa13.13□□□□□ -0.31
HERPUD1-215ENST00000568676 COQ5Q5HYK3 327 aa13.13□□□□□ -0.31
HERPUD1-215ENST00000568676 WDR25Q64LD2 544 aaPredicted RBP13.13□□□□□ -0.31
HERPUD1-215ENST00000568676 C1orf94Q6P1W5 598 aa13.13□□□□□ -0.31
HERPUD1-215ENST00000568676 BRD3OSQ6XYD6 125 aa13.13□□□□□ -0.31
HERPUD1-215ENST00000568676 ZNF620Q6ZNG0 422 aa13.13□□□□□ -0.31
HERPUD1-215ENST00000568676 NRMQ8IXM6 262 aa13.13□□□□□ -0.31
HERPUD1-215ENST00000568676 OFCC1Q8IZS5 231 aa13.13□□□□□ -0.31
HERPUD1-215ENST00000568676 OR5AS1Q8N127 324 aa13.13□□□□□ -0.31
HERPUD1-215ENST00000568676 OR10AD1Q8NGE0 317 aa13.13□□□□□ -0.31
HERPUD1-215ENST00000568676 TBC1D15Q8TC07 691 aa13.13□□□□□ -0.31
HERPUD1-215ENST00000568676 DYDC1Q8WWB3 177 aa13.13□□□□□ -0.31
HERPUD1-215ENST00000568676 LZICQ8WZA0 190 aa13.13□□□□□ -0.31
HERPUD1-215ENST00000568676 TAF15Q92804 592 aaKnown RBP eCLIP13.13□□□□□ -0.31
HERPUD1-215ENST00000568676 UBE2FQ969M7 185 aa13.13□□□□□ -0.31
HERPUD1-215ENST00000568676 A4GNTQ9UNA3 340 aa13.13□□□□□ -0.31
HERPUD1-215ENST00000568676 SOX21Q9Y651 276 aaPredicted RBP13.13□□□□□ -0.31
HERPUD1-215ENST00000568676 FBP2O00757 339 aa13.12□□□□□ -0.31
HERPUD1-215ENST00000568676 KDELR2P33947 212 aa13.12□□□□□ -0.31
HERPUD1-215ENST00000568676 RPL4P36578 427 aaKnown RBP13.12□□□□□ -0.31
HERPUD1-215ENST00000568676 ERFP50548 548 aa13.12□□□□□ -0.31
HERPUD1-215ENST00000568676 SELENOWP63302 87 aa13.12□□□□□ -0.31
HERPUD1-215ENST00000568676 FHL1Q13642 323 aa13.12□□□□□ -0.31
HERPUD1-215ENST00000568676 HLXQ14774 488 aaPredicted RBP13.12□□□□□ -0.31
HERPUD1-215ENST00000568676 TRAM2Q15035 370 aa13.12□□□□□ -0.31
HERPUD1-215ENST00000568676 CYBRD1Q53TN4 286 aa13.12□□□□□ -0.31
HERPUD1-215ENST00000568676 OR2T2Q6IF00 324 aa13.12□□□□□ -0.31
HERPUD1-215ENST00000568676 PGM2L1Q6PCE3 622 aa13.12□□□□□ -0.31
HERPUD1-215ENST00000568676 GLB1L2Q8IW92 636 aa13.12□□□□□ -0.31
HERPUD1-215ENST00000568676 OR11L1Q8NGX0 322 aa13.12□□□□□ -0.31
HERPUD1-215ENST00000568676 Q8TCH9 128 aa13.12□□□□□ -0.31
HERPUD1-215ENST00000568676 ZNF570Q96NI8 536 aa13.12□□□□□ -0.31
HERPUD1-215ENST00000568676 FNDC11Q9BVV2 318 aa13.12□□□□□ -0.31
HERPUD1-215ENST00000568676 HCAR1Q9BXC0 346 aa13.12□□□□□ -0.31
HERPUD1-215ENST00000568676 CHIAQ9BZP6 476 aa13.12□□□□□ -0.31
HERPUD1-215ENST00000568676 TMEM100Q9NV29 134 aa13.12□□□□□ -0.31
HERPUD1-215ENST00000568676 ASH2LQ9UBL3 628 aa13.12□□□□□ -0.31
HERPUD1-215ENST00000568676 NOP16Q9Y3C1 178 aaKnown RBP13.12□□□□□ -0.31
HERPUD1-215ENST00000568676 H7C1C5 153 aa13.11□□□□□ -0.31
HERPUD1-215ENST00000568676 KHDRBS3O75525 346 aaKnown RBP13.11□□□□□ -0.31
HERPUD1-215ENST00000568676 ZNF205O95201 554 aa13.11□□□□□ -0.31
HERPUD1-215ENST00000568676 MELTFP08582 738 aa13.11□□□□□ -0.31
HERPUD1-215ENST00000568676 RBMXP38159 391 aaKnown RBP13.11□□□□□ -0.31
HERPUD1-215ENST00000568676 PSMB10P40306 273 aa13.11□□□□□ -0.31
HERPUD1-215ENST00000568676 LCN6P62502 163 aa13.11□□□□□ -0.31
HERPUD1-215ENST00000568676 RELBQ01201 579 aa13.11□□□□□ -0.31
HERPUD1-215ENST00000568676 TAF9Q16594 264 aa13.11□□□□□ -0.31
HERPUD1-215ENST00000568676 C11orf91Q3C1V1 193 aa13.11□□□□□ -0.31
HERPUD1-215ENST00000568676 MESTQ5EB52 335 aa13.11□□□□□ -0.31
HERPUD1-215ENST00000568676 RABL3Q5HYI8 236 aa13.11□□□□□ -0.31
HERPUD1-215ENST00000568676 GPR139Q6DWJ6 353 aa13.11□□□□□ -0.31
HERPUD1-215ENST00000568676 TMPRSS11FQ6ZWK6 438 aa13.11□□□□□ -0.31
HERPUD1-215ENST00000568676 RHOUQ7L0Q8 258 aa13.11□□□□□ -0.31
HERPUD1-215ENST00000568676 FAM122BQ7Z309 247 aa13.11□□□□□ -0.31
HERPUD1-215ENST00000568676 MOGAT3Q86VF5 341 aa13.11□□□□□ -0.31
HERPUD1-215ENST00000568676 GJC3Q8NFK1 279 aa13.11□□□□□ -0.31
HERPUD1-215ENST00000568676 ACOT11Q8WXI4 607 aaPredicted RBP13.11□□□□□ -0.31
HERPUD1-215ENST00000568676 GATAD2BQ8WXI9 593 aa13.11□□□□□ -0.31
HERPUD1-215ENST00000568676 COQ7Q99807 217 aa13.11□□□□□ -0.31
HERPUD1-215ENST00000568676 RBM4BQ9BQ04 359 aaKnown RBP13.11□□□□□ -0.31
HERPUD1-215ENST00000568676 TRIM15Q9C019 465 aa13.11□□□□□ -0.31
HERPUD1-215ENST00000568676 HDHD2Q9H0R4 259 aa13.11□□□□□ -0.31
HERPUD1-215ENST00000568676 MARCH7Q9H992 704 aa13.11□□□□□ -0.31
HERPUD1-215ENST00000568676 TRIM36Q9NQ86 728 aa13.11□□□□□ -0.31
HERPUD1-215ENST00000568676 PTTG3PQ9NZH4 202 aa13.11□□□□□ -0.31
HERPUD1-215ENST00000568676 RNF114Q9Y508 228 aa13.11□□□□□ -0.31
HERPUD1-215ENST00000568676 BBIP1A8MTZ0 92 aa13.1□□□□□ -0.31
HERPUD1-215ENST00000568676 ZNF879B4DU55 563 aa13.1□□□□□ -0.31
HERPUD1-215ENST00000568676 F5H5P2 479 aa13.1□□□□□ -0.31
HERPUD1-215ENST00000568676 MLNRO43193 412 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms