RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 CD47Q08722 323 aa4.45□□□□□ -1.7
KARS-208ENST00000566772 SF3A2Q15428 464 aaKnown RBP4.45□□□□□ -1.7
KARS-208ENST00000566772 LRRC36Q1X8D7 754 aa4.45□□□□□ -1.7
KARS-208ENST00000566772 KRT71Q3SY84 523 aa4.45□□□□□ -1.7
KARS-208ENST00000566772 PAN3Q58A45 887 aaKnown RBP4.45□□□□□ -1.7
KARS-208ENST00000566772 OR2B11Q5JQS5 317 aa4.45□□□□□ -1.7
KARS-208ENST00000566772 WDR74Q6RFH5 385 aaPredicted RBP4.45□□□□□ -1.7
KARS-208ENST00000566772 SPESP1Q6UW49 350 aa4.45□□□□□ -1.7
KARS-208ENST00000566772 PRSS41Q7RTY9 318 aa4.45□□□□□ -1.7
KARS-208ENST00000566772 CMC1Q7Z7K0 106 aa4.45□□□□□ -1.7
KARS-208ENST00000566772 APRG1Q8IVJ8 170 aa4.45□□□□□ -1.7
KARS-208ENST00000566772 TMEM105Q8N8V8 129 aa4.45□□□□□ -1.7
KARS-208ENST00000566772 C9orf72Q96LT7 481 aa4.45□□□□□ -1.7
KARS-208ENST00000566772 OR5B12Q96R08 314 aa4.45□□□□□ -1.7
KARS-208ENST00000566772 ECSITQ9BQ95 431 aa4.45□□□□□ -1.7
KARS-208ENST00000566772 TM6SF2Q9BZW4 377 aa4.45□□□□□ -1.7
KARS-208ENST00000566772 POMKQ9H5K3 350 aa4.45□□□□□ -1.7
KARS-208ENST00000566772 ZC4H2Q9NQZ6 224 aa4.45□□□□□ -1.7
KARS-208ENST00000566772 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.45□□□□□ -1.7
KARS-208ENST00000566772 IFNKQ9P0W0 207 aa4.45□□□□□ -1.7
KARS-208ENST00000566772 KIF25Q9UIL4 384 aa4.45□□□□□ -1.7
KARS-208ENST00000566772 ZNF256Q9Y2P7 627 aaPredicted RBP4.45□□□□□ -1.7
KARS-208ENST00000566772 GMEB1Q9Y692 573 aa4.45□□□□□ -1.7
KARS-208ENST00000566772 GVINP1Q7Z2Y8 2422 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 RIF1Q5UIP0 2472 aaKnown RBP4.44□□□□□ -1.7
KARS-208ENST00000566772 A0A087WYN8 130 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 IGHV3-35A0A0C4DH35 117 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 OR6C74A6NCV1 312 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 KRTAP29-1A8MX34 341 aaPredicted RBP4.44□□□□□ -1.7
KARS-208ENST00000566772 H7C423 109 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 CDC7O00311 574 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 ZG16O60844 167 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 CLDN11O75508 207 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 FARS2O95363 451 aaKnown RBP4.44□□□□□ -1.7
KARS-208ENST00000566772 KRT16P08779 473 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 ZNF250P15622 560 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 HOXB8P17481 243 aaPredicted RBP4.44□□□□□ -1.7
KARS-208ENST00000566772 TCN1P20061 433 aaPredicted RBP4.44□□□□□ -1.7
KARS-208ENST00000566772 PMCHP20382 165 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 AQP2P41181 271 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 GPR1P46091 355 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 NPBWR2P48146 333 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 ATP12AP54707 1039 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 ADARB1P78563 741 aaKnown RBP4.44□□□□□ -1.7
KARS-208ENST00000566772 ECH1Q13011 328 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 XRCC4Q13426 336 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 TRAM2Q15035 370 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 NCF4Q15080 339 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 VAX1Q5SQQ9 334 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 METTL11BQ5VVY1 283 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 OLFML2AQ68BL7 652 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 C11orf71Q6IPW1 123 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 ULK3Q6PHR2 472 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 UNQ9370/PRO34162Q6UXP9 181 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 SLC25A42Q86VD7 318 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 UBALD2Q8IYN6 164 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 SYCE1Q8N0S2 351 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 APH1AQ96BI3 265 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 MED8Q96G25 268 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 LZTS2Q9BRK4 669 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 CHID1Q9BWS9 393 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 SPZ1Q9BXG8 430 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 SELENOIQ9C0D9 397 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 C20orf85Q9H1P6 137 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 NTN4Q9HB63 628 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 TREM1Q9NP99 234 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 ACP6Q9NPH0 428 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 ZNF302Q9NR11 478 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 RGS18Q9NS28 235 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 CCDC59Q9P031 241 aaKnown RBP4.44□□□□□ -1.7
KARS-208ENST00000566772 LGALS13Q9UHV8 139 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 GNPTGQ9UJJ9 305 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 KLHL21Q9UJP4 597 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 ING4Q9UNL4 249 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 UBIAD1Q9Y5Z9 338 aa4.44□□□□□ -1.7
KARS-208ENST00000566772 DMDP11532 3685 aa4.43□□□□□ -1.7
KARS-208ENST00000566772 A0A1B0GW55 424 aa4.43□□□□□ -1.7
KARS-208ENST00000566772 PRSS44E7EML9 344 aa4.43□□□□□ -1.7
KARS-208ENST00000566772 SLC9A3R1O14745 358 aaPredicted RBP4.43□□□□□ -1.7
KARS-208ENST00000566772 PHF1O43189 567 aaPredicted RBP4.43□□□□□ -1.7
KARS-208ENST00000566772 MGRN1O60291 552 aa4.43□□□□□ -1.7
KARS-208ENST00000566772 DUX4L2P0CJ85 424 aa4.43□□□□□ -1.7
KARS-208ENST00000566772 DUX4L3P0CJ86 424 aa4.43□□□□□ -1.7
KARS-208ENST00000566772 DUX4L4P0CJ87 422 aa4.43□□□□□ -1.7
KARS-208ENST00000566772 DUX4L5P0CJ88 424 aa4.43□□□□□ -1.7
KARS-208ENST00000566772 DUX4L6P0CJ89 424 aa4.43□□□□□ -1.7
KARS-208ENST00000566772 DUX4L7P0CJ90 424 aa4.43□□□□□ -1.7
KARS-208ENST00000566772 CALM1P0DP23 149 aa4.43□□□□□ -1.7
KARS-208ENST00000566772 CALM2P0DP24 149 aa4.43□□□□□ -1.7
KARS-208ENST00000566772 CALM3P0DP25 149 aa4.43□□□□□ -1.7
KARS-208ENST00000566772 GABRR2P28476 465 aa4.43□□□□□ -1.7
KARS-208ENST00000566772 OR1E1P30953 314 aa4.43□□□□□ -1.7
KARS-208ENST00000566772 TNFSF9P41273 254 aa4.43□□□□□ -1.7
KARS-208ENST00000566772 KIR2DS4P43632 304 aa4.43□□□□□ -1.7
KARS-208ENST00000566772 ATP5J2P56134 94 aa4.43□□□□□ -1.7
KARS-208ENST00000566772 TGFBR3Q03167 851 aa4.43□□□□□ -1.7
KARS-208ENST00000566772 ITGB3BPQ13352 177 aaPredicted RBP4.43□□□□□ -1.7
KARS-208ENST00000566772 GPR176Q14439 515 aa4.43□□□□□ -1.7
KARS-208ENST00000566772 ANGPT1Q15389 498 aa4.43□□□□□ -1.7
KARS-208ENST00000566772 TSC22D1Q15714 1073 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms