RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 GCM1Q9NP62 436 aa12.61□□□□□ -0.39
RNF40-209ENST00000566703 KRCC1Q9NPI7 259 aaPredicted RBP12.61□□□□□ -0.39
RNF40-209ENST00000566703 ARMCX1Q9P291 453 aa12.61□□□□□ -0.39
RNF40-209ENST00000566703 GMPR2Q9P2T1 348 aaKnown RBP12.61□□□□□ -0.39
RNF40-209ENST00000566703 ASH2LQ9UBL3 628 aa12.61□□□□□ -0.39
RNF40-209ENST00000566703 IL20RAQ9UHF4 553 aa12.61□□□□□ -0.39
RNF40-209ENST00000566703 LRCH1Q9Y2L9 728 aa12.61□□□□□ -0.39
RNF40-209ENST00000566703 CRABP1P29762 137 aa12.6□□□□□ -0.39
RNF40-209ENST00000566703 SRP9P49458 86 aaKnown RBP12.6□□□□□ -0.39
RNF40-209ENST00000566703 RPS6KA3P51812 740 aa12.6□□□□□ -0.39
RNF40-209ENST00000566703 HIST1H3AP68431 136 aa12.6□□□□□ -0.39
RNF40-209ENST00000566703 ZNF181Q2M3W8 571 aa12.6□□□□□ -0.39
RNF40-209ENST00000566703 HIST2H3PS2Q5TEC6 136 aa12.6□□□□□ -0.39
RNF40-209ENST00000566703 DNM1P34Q6PK57 102 aa12.6□□□□□ -0.39
RNF40-209ENST00000566703 HIST2H3AQ71DI3 136 aa12.6□□□□□ -0.39
RNF40-209ENST00000566703 GJC3Q8NFK1 279 aa12.6□□□□□ -0.39
RNF40-209ENST00000566703 C22orf15Q8WYQ4 148 aa12.6□□□□□ -0.39
RNF40-209ENST00000566703 FAM162AQ96A26 154 aa12.6□□□□□ -0.39
RNF40-209ENST00000566703 APOBEC3DQ96AK3 386 aaPredicted RBP12.6□□□□□ -0.39
RNF40-209ENST00000566703 FAM46AQ96IP4 442 aaKnown RBP12.6□□□□□ -0.39
RNF40-209ENST00000566703 ZNF582Q96NG8 517 aaPredicted RBP12.6□□□□□ -0.39
RNF40-209ENST00000566703 COQ7Q99807 217 aa12.6□□□□□ -0.39
RNF40-209ENST00000566703 NUAK2Q9H093 628 aa12.6□□□□□ -0.39
RNF40-209ENST00000566703 RERGLQ9H628 205 aa12.6□□□□□ -0.39
RNF40-209ENST00000566703 NDUFAF4Q9P032 175 aa12.6□□□□□ -0.39
RNF40-209ENST00000566703 ZNF69Q9UC07 566 aa12.6□□□□□ -0.39
RNF40-209ENST00000566703 OR5V1Q9UGF6 321 aa12.6□□□□□ -0.39
RNF40-209ENST00000566703 IER3IP1Q9Y5U9 82 aa12.6□□□□□ -0.39
RNF40-209ENST00000566703 DYSFO75923 2080 aa12.6□□□□□ -0.39
RNF40-209ENST00000566703 NBEAL1Q6ZS30 2694 aa12.59□□□□□ -0.39
RNF40-209ENST00000566703 IMPA2O14732 288 aa12.59□□□□□ -0.39
RNF40-209ENST00000566703 RER1O15258 196 aa12.59□□□□□ -0.39
RNF40-209ENST00000566703 CDKN2AP42771 156 aaKnown RBP12.59□□□□□ -0.39
RNF40-209ENST00000566703 KLF17Q5JT82 389 aaPredicted RBP12.59□□□□□ -0.39
RNF40-209ENST00000566703 C1orf94Q6P1W5 598 aa12.59□□□□□ -0.39
RNF40-209ENST00000566703 SHISA2Q6UWI4 295 aa12.59□□□□□ -0.39
RNF40-209ENST00000566703 COLCA1Q6ZS62 124 aa12.59□□□□□ -0.39
RNF40-209ENST00000566703 SIGLECL1Q8N7X8 197 aa12.59□□□□□ -0.39
RNF40-209ENST00000566703 SLC7A6Q92536 515 aa12.59□□□□□ -0.39
RNF40-209ENST00000566703 MEGF10Q96KG7 1140 aa12.59□□□□□ -0.39
RNF40-209ENST00000566703 KCTD14Q9BQ13 255 aaPredicted RBP12.59□□□□□ -0.39
RNF40-209ENST00000566703 SLC30A2Q9BRI3 323 aa12.59□□□□□ -0.39
RNF40-209ENST00000566703 HDHD2Q9H0R4 259 aa12.59□□□□□ -0.39
RNF40-209ENST00000566703 TMEM165Q9HC07 324 aa12.59□□□□□ -0.39
RNF40-209ENST00000566703 MIOXQ9UGB7 285 aa12.59□□□□□ -0.39
RNF40-209ENST00000566703 AURKCQ9UQB9 309 aa12.59□□□□□ -0.39
RNF40-209ENST00000566703 PPIAL4AQ9Y536 164 aa12.59□□□□□ -0.39
RNF40-209ENST00000566703 TANC2Q9HCD6 1990 aa12.59□□□□□ -0.39
RNF40-209ENST00000566703 WNK2Q9Y3S1 2297 aa12.59□□□□□ -0.39
RNF40-209ENST00000566703 A0A1B0GWJ7 208 aa12.58□□□□□ -0.4
RNF40-209ENST00000566703 CEACAM18A8MTB9 384 aa12.58□□□□□ -0.4
RNF40-209ENST00000566703 IQCF6A8MYZ5 107 aa12.58□□□□□ -0.4
RNF40-209ENST00000566703 CLDN34H7C241 214 aa12.58□□□□□ -0.4
RNF40-209ENST00000566703 SOCS2O14508 198 aa12.58□□□□□ -0.4
RNF40-209ENST00000566703 SELEP16581 610 aa12.58□□□□□ -0.4
RNF40-209ENST00000566703 MMP16P51512 607 aa12.58□□□□□ -0.4
RNF40-209ENST00000566703 SMIM11AP58511 58 aa12.58□□□□□ -0.4
RNF40-209ENST00000566703 SEC61A1P61619 476 aaKnown RBP12.58□□□□□ -0.4
RNF40-209ENST00000566703 PAX2Q02962 417 aa12.58□□□□□ -0.4
RNF40-209ENST00000566703 OR2T2Q6IF00 324 aa12.58□□□□□ -0.4
RNF40-209ENST00000566703 LRRN1Q6UXK5 716 aa12.58□□□□□ -0.4
RNF40-209ENST00000566703 PTCHD4Q6ZW05 846 aa12.58□□□□□ -0.4
RNF40-209ENST00000566703 RSRC1Q96IZ7 334 aaKnown RBP12.58□□□□□ -0.4
RNF40-209ENST00000566703 PLEKHA8Q96JA3 519 aa12.58□□□□□ -0.4
RNF40-209ENST00000566703 C7orf34Q96L11 122 aa12.58□□□□□ -0.4
RNF40-209ENST00000566703 DHRS1Q96LJ7 313 aa12.58□□□□□ -0.4
RNF40-209ENST00000566703 DCAF13Q9NV06 445 aaKnown RBP12.58□□□□□ -0.4
RNF40-209ENST00000566703 PTTG3PQ9NZH4 202 aa12.58□□□□□ -0.4
RNF40-209ENST00000566703 ABCD2Q9UBJ2 740 aa12.58□□□□□ -0.4
RNF40-209ENST00000566703 B9D1Q9UPM9 204 aa12.58□□□□□ -0.4
RNF40-209ENST00000566703 SAMD4AQ9UPU9 718 aaKnown RBP12.58□□□□□ -0.4
RNF40-209ENST00000566703 POLR1DQ9Y2S0 133 aa12.58□□□□□ -0.4
RNF40-209ENST00000566703 ARHGAP32A7KAX9 2087 aa12.58□□□□□ -0.4
RNF40-209ENST00000566703 UNC119BA6NIH7 251 aa12.57□□□□□ -0.4
RNF40-209ENST00000566703 LRRC30A6NM36 301 aa12.57□□□□□ -0.4
RNF40-209ENST00000566703 ARPC3O15145 178 aa12.57□□□□□ -0.4
RNF40-209ENST00000566703 DBHP09172 617 aa12.57□□□□□ -0.4
RNF40-209ENST00000566703 NCK1P16333 377 aa12.57□□□□□ -0.4
RNF40-209ENST00000566703 CD80P33681 288 aa12.57□□□□□ -0.4
RNF40-209ENST00000566703 MTNR1AP48039 350 aa12.57□□□□□ -0.4
RNF40-209ENST00000566703 ERFP50548 548 aa12.57□□□□□ -0.4
RNF40-209ENST00000566703 FXYD6P3P58550 94 aa12.57□□□□□ -0.4
RNF40-209ENST00000566703 ECH1Q13011 328 aa12.57□□□□□ -0.4
RNF40-209ENST00000566703 KRT72Q14CN4 511 aa12.57□□□□□ -0.4
RNF40-209ENST00000566703 FGD3Q5JSP0 725 aa12.57□□□□□ -0.4
RNF40-209ENST00000566703 GLYATQ6IB77 296 aa12.57□□□□□ -0.4
RNF40-209ENST00000566703 SMARCD3Q6STE5 483 aa12.57□□□□□ -0.4
RNF40-209ENST00000566703 BTNL3Q6UXE8 466 aa12.57□□□□□ -0.4
RNF40-209ENST00000566703 C9orf139Q6ZV77 190 aa12.57□□□□□ -0.4
RNF40-209ENST00000566703 C1orf87Q8N0U7 546 aa12.57□□□□□ -0.4
RNF40-209ENST00000566703 OR5AS1Q8N127 324 aa12.57□□□□□ -0.4
RNF40-209ENST00000566703 CELF2-AS1Q8N7Q2 184 aa12.57□□□□□ -0.4
RNF40-209ENST00000566703 RAB40AQ8WXH6 277 aa12.57□□□□□ -0.4
RNF40-209ENST00000566703 ERGIC1Q969X5 290 aa12.57□□□□□ -0.4
RNF40-209ENST00000566703 CMTM5Q96DZ9 223 aa12.57□□□□□ -0.4
RNF40-209ENST00000566703 NEIL1Q96FI4 390 aaPredicted RBP12.57□□□□□ -0.4
RNF40-209ENST00000566703 FUZQ9BT04 418 aa12.57□□□□□ -0.4
RNF40-209ENST00000566703 SSBP3Q9BWW4 388 aaPredicted RBP12.57□□□□□ -0.4
RNF40-209ENST00000566703 HCAR1Q9BXC0 346 aa12.57□□□□□ -0.4
RNF40-209ENST00000566703 MS4A7Q9GZW8 240 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms