RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 LYNP07948 512 aa9.94□□□□□ -0.82
KARS-207ENST00000566560 COX5BP10606 129 aa9.94□□□□□ -0.82
KARS-207ENST00000566560 CCL2P13500 99 aa9.94□□□□□ -0.82
KARS-207ENST00000566560 CCNOP22674 350 aa9.94□□□□□ -0.82
KARS-207ENST00000566560 MYF6P23409 242 aa9.94□□□□□ -0.82
KARS-207ENST00000566560 LOXP28300 417 aaPredicted RBP9.94□□□□□ -0.82
KARS-207ENST00000566560 CALCRP30988 508 aa9.94□□□□□ -0.82
KARS-207ENST00000566560 GDI2P50395 445 aaKnown RBP9.94□□□□□ -0.82
KARS-207ENST00000566560 SMN1Q16637 294 aaKnown RBP9.94□□□□□ -0.82
KARS-207ENST00000566560 KRT80Q6KB66 452 aa9.94□□□□□ -0.82
KARS-207ENST00000566560 SLC22A25Q6T423 547 aa9.94□□□□□ -0.82
KARS-207ENST00000566560 SPATC1Q76KD6 591 aa9.94□□□□□ -0.82
KARS-207ENST00000566560 TMEM200AQ86VY9 491 aa9.94□□□□□ -0.82
KARS-207ENST00000566560 RFLNBQ8N5W9 214 aa9.94□□□□□ -0.82
KARS-207ENST00000566560 OR10H4Q8NGA5 316 aa9.94□□□□□ -0.82
KARS-207ENST00000566560 OR4F15Q8NGB8 312 aa9.94□□□□□ -0.82
KARS-207ENST00000566560 OR10S1Q8NGN2 331 aa9.94□□□□□ -0.82
KARS-207ENST00000566560 OR1J2Q8NGS2 313 aa9.94□□□□□ -0.82
KARS-207ENST00000566560 FBLIM1Q8WUP2 373 aa9.94□□□□□ -0.82
KARS-207ENST00000566560 THEM6Q8WUY1 208 aa9.94□□□□□ -0.82
KARS-207ENST00000566560 RADILQ96JH8 1075 aa9.94□□□□□ -0.82
KARS-207ENST00000566560 MNTQ99583 582 aa9.94□□□□□ -0.82
KARS-207ENST00000566560 ATF6BQ99941 703 aa9.94□□□□□ -0.82
KARS-207ENST00000566560 COPS4Q9BT78 406 aa9.94□□□□□ -0.82
KARS-207ENST00000566560 ABHD6Q9BV23 337 aa9.94□□□□□ -0.82
KARS-207ENST00000566560 GSX2Q9BZM3 304 aa9.94□□□□□ -0.82
KARS-207ENST00000566560 AMBNQ9NP70 447 aa9.94□□□□□ -0.82
KARS-207ENST00000566560 DDX28Q9NUL7 540 aaKnown RBP9.94□□□□□ -0.82
KARS-207ENST00000566560 POU2F3Q9UKI9 436 aa9.94□□□□□ -0.82
KARS-207ENST00000566560 COPS3Q9UNS2 423 aa9.94□□□□□ -0.82
KARS-207ENST00000566560 RPL36Q9Y3U8 105 aaKnown RBP9.94□□□□□ -0.82
KARS-207ENST00000566560 TMEM14AQ9Y6G1 99 aa9.94□□□□□ -0.82
KARS-207ENST00000566560 C5orf49A4QMS7 147 aa9.93□□□□□ -0.82
KARS-207ENST00000566560 PHYHO14832 338 aa9.93□□□□□ -0.82
KARS-207ENST00000566560 FAM20BO75063 409 aa9.93□□□□□ -0.82
KARS-207ENST00000566560 ALOX5APP20292 161 aa9.93□□□□□ -0.82
KARS-207ENST00000566560 ACTC1P68032 377 aa9.93□□□□□ -0.82
KARS-207ENST00000566560 ACTA1P68133 377 aa9.93□□□□□ -0.82
KARS-207ENST00000566560 GALK2Q01415 458 aa9.93□□□□□ -0.82
KARS-207ENST00000566560 TLE4Q04727 773 aa9.93□□□□□ -0.82
KARS-207ENST00000566560 ECH1Q13011 328 aa9.93□□□□□ -0.82
KARS-207ENST00000566560 CDK5R2Q13319 367 aa9.93□□□□□ -0.82
KARS-207ENST00000566560 TAF13Q15543 124 aa9.93□□□□□ -0.82
KARS-207ENST00000566560 ZNF704Q6ZNC4 412 aaPredicted RBP9.93□□□□□ -0.82
KARS-207ENST00000566560 PAQR4Q8N4S7 273 aaPredicted RBP9.93□□□□□ -0.82
KARS-207ENST00000566560 IL17RDQ8NFM7 739 aa9.93□□□□□ -0.82
KARS-207ENST00000566560 RNF133Q8WVZ7 376 aa9.93□□□□□ -0.82
KARS-207ENST00000566560 SLC7A6Q92536 515 aa9.93□□□□□ -0.82
KARS-207ENST00000566560 LGALS12Q96DT0 336 aa9.93□□□□□ -0.82
KARS-207ENST00000566560 C14orf79Q96F83 325 aa9.93□□□□□ -0.82
KARS-207ENST00000566560 POM121L2Q96KW2 1035 aa9.93□□□□□ -0.82
KARS-207ENST00000566560 AMELYQ99218 206 aa9.93□□□□□ -0.82
KARS-207ENST00000566560 TBX5Q99593 518 aa9.93□□□□□ -0.82
KARS-207ENST00000566560 CLEC4MQ9H2X3 399 aaPredicted RBP9.93□□□□□ -0.82
KARS-207ENST00000566560 CENPMQ9NSP4 180 aa9.93□□□□□ -0.82
KARS-207ENST00000566560 LOC100509620A0A075B734 347 aa9.92□□□□□ -0.82
KARS-207ENST00000566560 IRGMA1A4Y4 181 aa9.92□□□□□ -0.82
KARS-207ENST00000566560 SHISA9B4DS77 424 aa9.92□□□□□ -0.82
KARS-207ENST00000566560 CTAG2O75638 210 aa9.92□□□□□ -0.82
KARS-207ENST00000566560 ABHD16AO95870 558 aa9.92□□□□□ -0.82
KARS-207ENST00000566560 PLAUP00749 431 aa9.92□□□□□ -0.82
KARS-207ENST00000566560 DBHP09172 617 aa9.92□□□□□ -0.82
KARS-207ENST00000566560 OR2T7P0C7T2 308 aa9.92□□□□□ -0.82
KARS-207ENST00000566560 ZNF35P13682 527 aa9.92□□□□□ -0.82
KARS-207ENST00000566560 HSD11B1P28845 292 aa9.92□□□□□ -0.82
KARS-207ENST00000566560 SSTR2P30874 369 aa9.92□□□□□ -0.82
KARS-207ENST00000566560 SLC15A1P46059 708 aa9.92□□□□□ -0.82
KARS-207ENST00000566560 HCCSP53701 268 aa9.92□□□□□ -0.82
KARS-207ENST00000566560 CXCR4P61073 352 aa9.92□□□□□ -0.82
KARS-207ENST00000566560 GRB2P62993 217 aaKnown RBP9.92□□□□□ -0.82
KARS-207ENST00000566560 RAB40BQ12829 278 aa9.92□□□□□ -0.82
KARS-207ENST00000566560 SNTB2Q13425 540 aaKnown RBP9.92□□□□□ -0.82
KARS-207ENST00000566560 LAIR2Q6ISS4 152 aa9.92□□□□□ -0.82
KARS-207ENST00000566560 ZNF322Q6U7Q0 402 aaPredicted RBP9.92□□□□□ -0.82
KARS-207ENST00000566560 OR2T27Q8NH04 317 aa9.92□□□□□ -0.82
KARS-207ENST00000566560 ASB17Q8WXJ9 295 aa9.92□□□□□ -0.82
KARS-207ENST00000566560 SPTSSAQ969W0 71 aa9.92□□□□□ -0.82
KARS-207ENST00000566560 CITED4Q96RK1 184 aa9.92□□□□□ -0.82
KARS-207ENST00000566560 RHNO1Q9BSD3 238 aa9.92□□□□□ -0.82
KARS-207ENST00000566560 TMEM204Q9BSN7 226 aa9.92□□□□□ -0.82
KARS-207ENST00000566560 OR51B6Q9H340 312 aa9.92□□□□□ -0.82
KARS-207ENST00000566560 IKZF2Q9UKS7 526 aa9.92□□□□□ -0.82
KARS-207ENST00000566560 PCDHGB1Q9Y5G3 927 aa9.92□□□□□ -0.82
KARS-207ENST00000566560 ATP23Q9Y6H3 246 aa9.92□□□□□ -0.82
KARS-207ENST00000566560 RAI1Q7Z5J4 1906 aaPredicted RBP9.92□□□□□ -0.82
KARS-207ENST00000566560 A0A1W2PPR1 153 aa9.91□□□□□ -0.82
KARS-207ENST00000566560 A0A1W2PQL4 384 aaPredicted RBP9.91□□□□□ -0.82
KARS-207ENST00000566560 FAM221AA4D161 298 aa9.91□□□□□ -0.82
KARS-207ENST00000566560 PRR32B1ATL7 298 aa9.91□□□□□ -0.82
KARS-207ENST00000566560 F5H5K5 113 aa9.91□□□□□ -0.82
KARS-207ENST00000566560 M0R135 149 aa9.91□□□□□ -0.82
KARS-207ENST00000566560 PSMD9O00233 223 aa9.91□□□□□ -0.82
KARS-207ENST00000566560 SLC1A7O00341 560 aa9.91□□□□□ -0.82
KARS-207ENST00000566560 XPNPEP2O43895 674 aa9.91□□□□□ -0.82
KARS-207ENST00000566560 SMPD2O60906 423 aa9.91□□□□□ -0.82
KARS-207ENST00000566560 FADS2O95864 444 aaKnown RBP9.91□□□□□ -0.82
KARS-207ENST00000566560 H2BFMP0C1H6 154 aa9.91□□□□□ -0.82
KARS-207ENST00000566560 OPRL1P41146 370 aa9.91□□□□□ -0.82
KARS-207ENST00000566560 WNT5AP41221 380 aa9.91□□□□□ -0.82
KARS-207ENST00000566560 SLC6A9P48067 706 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms