RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 CSF1P09603 554 aa16.62■□□□□ 0.25
MSLN-207ENST00000566549 DNASE1P24855 282 aa16.62■□□□□ 0.25
MSLN-207ENST00000566549 HSD11B1P28845 292 aa16.62■□□□□ 0.25
MSLN-207ENST00000566549 RPS18P62269 152 aaKnown RBP16.62■□□□□ 0.25
MSLN-207ENST00000566549 ZFP36L1Q07352 338 aaKnown RBP16.62■□□□□ 0.25
MSLN-207ENST00000566549 RAET1LQ5VY80 246 aa16.62■□□□□ 0.25
MSLN-207ENST00000566549 TCEAL6Q6IPX3 200 aa16.62■□□□□ 0.25
MSLN-207ENST00000566549 DEGS2Q6QHC5 323 aa16.62■□□□□ 0.25
MSLN-207ENST00000566549 GLDNQ6ZMI3 551 aaPredicted RBP16.62■□□□□ 0.25
MSLN-207ENST00000566549 NLRC3Q7RTR2 1065 aa16.62■□□□□ 0.25
MSLN-207ENST00000566549 ADGRE4PQ86SQ3 457 aa16.62■□□□□ 0.25
MSLN-207ENST00000566549 C1orf210Q8IVY1 113 aa16.62■□□□□ 0.25
MSLN-207ENST00000566549 OR51S1Q8NGJ8 323 aa16.62■□□□□ 0.25
MSLN-207ENST00000566549 TCEAL3Q969E4 200 aa16.62■□□□□ 0.25
MSLN-207ENST00000566549 ADAT3Q96EY9 351 aaPredicted RBP16.62■□□□□ 0.25
MSLN-207ENST00000566549 SOX7Q9BT81 388 aa16.62■□□□□ 0.25
MSLN-207ENST00000566549 ANKRD34BA5PLL1 514 aa16.61■□□□□ 0.25
MSLN-207ENST00000566549 GFOD2Q3B7J2 385 aa16.61■□□□□ 0.25
MSLN-207ENST00000566549 TMEM156Q8N614 296 aa16.61■□□□□ 0.25
MSLN-207ENST00000566549 MEIOBQ8N635 442 aa16.61■□□□□ 0.25
MSLN-207ENST00000566549 ACBD4Q8NC06 268 aa16.61■□□□□ 0.25
MSLN-207ENST00000566549 OR8H1Q8NGG4 311 aa16.61■□□□□ 0.25
MSLN-207ENST00000566549 OR2AJ1Q8NGZ0 328 aa16.61■□□□□ 0.25
MSLN-207ENST00000566549 OR51E1Q8TCB6 317 aa16.61■□□□□ 0.25
MSLN-207ENST00000566549 FAM46BQ96A09 425 aa16.61■□□□□ 0.25
MSLN-207ENST00000566549 SLC39A1Q9NY26 324 aa16.61■□□□□ 0.25
MSLN-207ENST00000566549 MGAT4CQ9UBM8 478 aa16.61■□□□□ 0.25
MSLN-207ENST00000566549 EIF3KQ9UBQ5 218 aaKnown RBP16.61■□□□□ 0.25
MSLN-207ENST00000566549 ZNF726A6NNF4 738 aa16.61■□□□□ 0.25
MSLN-207ENST00000566549 TTLL8A6PVC2 850 aa16.61■□□□□ 0.25
MSLN-207ENST00000566549 ERVH48-1M5A8F1 160 aa16.61■□□□□ 0.25
MSLN-207ENST00000566549 FAUP35544 74 aaKnown RBP16.61■□□□□ 0.25
MSLN-207ENST00000566549 CLDN17P56750 224 aa16.61■□□□□ 0.25
MSLN-207ENST00000566549 TAF13Q15543 124 aa16.61■□□□□ 0.25
MSLN-207ENST00000566549 CREB3L2Q70SY1 520 aa16.61■□□□□ 0.25
MSLN-207ENST00000566549 OR52N4Q8NGI2 321 aa16.61■□□□□ 0.25
MSLN-207ENST00000566549 OR13C9Q8NGT0 318 aa16.61■□□□□ 0.25
MSLN-207ENST00000566549 OXGR1Q96P68 337 aa16.61■□□□□ 0.25
MSLN-207ENST00000566549 CNTRLQ7Z7A1 2325 aa16.61■□□□□ 0.25
MSLN-207ENST00000566549 TNRC6BQ9UPQ9 1833 aaKnown RBP16.61■□□□□ 0.25
MSLN-207ENST00000566549 NSG1A0A0A6YYJ2 146 aa16.6■□□□□ 0.25
MSLN-207ENST00000566549 EIF1P41567 113 aaKnown RBP16.6■□□□□ 0.25
MSLN-207ENST00000566549 DUSP3P51452 185 aaPredicted RBP16.6■□□□□ 0.25
MSLN-207ENST00000566549 UBE2MP61081 183 aaKnown RBP16.6■□□□□ 0.25
MSLN-207ENST00000566549 ZXDAP98168 799 aa16.6■□□□□ 0.25
MSLN-207ENST00000566549 ANGPT1Q15389 498 aa16.6■□□□□ 0.25
MSLN-207ENST00000566549 ZNF468Q5VIY5 522 aaPredicted RBP16.6■□□□□ 0.25
MSLN-207ENST00000566549 OPN5Q6U736 354 aa16.6■□□□□ 0.25
MSLN-207ENST00000566549 OR1J2Q8NGS2 313 aa16.6■□□□□ 0.25
MSLN-207ENST00000566549 SPACA5Q96QH8 159 aa16.6■□□□□ 0.25
MSLN-207ENST00000566549 ZNF700Q9H0M5 742 aa16.6■□□□□ 0.25
MSLN-207ENST00000566549 CNTD2Q9H8S5 307 aa16.6■□□□□ 0.25
MSLN-207ENST00000566549 SDK2Q58EX2 2172 aa16.6■□□□□ 0.25
MSLN-207ENST00000566549 A0A1B0GVI7 797 aa16.6■□□□□ 0.25
MSLN-207ENST00000566549 CREBL2O60519 120 aaPredicted RBP16.6■□□□□ 0.25
MSLN-207ENST00000566549 SSR4P51571 173 aa16.6■□□□□ 0.25
MSLN-207ENST00000566549 TOMM20Q15388 145 aa16.6■□□□□ 0.25
MSLN-207ENST00000566549 RBMS2Q15434 407 aaKnown RBP16.6■□□□□ 0.25
MSLN-207ENST00000566549 TMPPEQ6ZT21 453 aa16.6■□□□□ 0.25
MSLN-207ENST00000566549 ELMOD2Q8IZ81 293 aa16.6■□□□□ 0.25
MSLN-207ENST00000566549 UXS1Q8NBZ7 420 aa16.6■□□□□ 0.25
MSLN-207ENST00000566549 OR2Y1Q8NGV0 311 aa16.6■□□□□ 0.25
MSLN-207ENST00000566549 OR6X1Q8NH79 312 aa16.6■□□□□ 0.25
MSLN-207ENST00000566549 SLC25A43Q8WUT9 341 aaPredicted RBP16.6■□□□□ 0.25
MSLN-207ENST00000566549 WDR89Q96FK6 387 aaPredicted RBP16.6■□□□□ 0.25
MSLN-207ENST00000566549 AQP7P3A6NL99 342 aa16.59■□□□□ 0.25
MSLN-207ENST00000566549 VSIG10L2P0DP72 767 aa16.59■□□□□ 0.25
MSLN-207ENST00000566549 GABREP78334 506 aa16.59■□□□□ 0.25
MSLN-207ENST00000566549 MC2RQ01718 297 aa16.59■□□□□ 0.25
MSLN-207ENST00000566549 EXT1Q16394 746 aa16.59■□□□□ 0.25
MSLN-207ENST00000566549 PEAR1Q5VY43 1037 aaPredicted RBP16.59■□□□□ 0.25
MSLN-207ENST00000566549 ADPRHL1Q8NDY3 354 aa16.59■□□□□ 0.25
MSLN-207ENST00000566549 ZBTB8AQ96BR9 441 aa16.59■□□□□ 0.25
MSLN-207ENST00000566549 SEH1LQ96EE3 360 aa16.59■□□□□ 0.25
MSLN-207ENST00000566549 SLC17A5Q9NRA2 495 aa16.59■□□□□ 0.25
MSLN-207ENST00000566549 TAS2R8Q9NYW2 309 aa16.59■□□□□ 0.25
MSLN-207ENST00000566549 SCP2D1Q9UJQ7 156 aa16.59■□□□□ 0.25
MSLN-207ENST00000566549 HDGFL3Q9Y3E1 203 aa16.59■□□□□ 0.25
MSLN-207ENST00000566549 MEGF11A6BM72 1044 aa16.59■□□□□ 0.25
MSLN-207ENST00000566549 TMEM235A6NFC5 223 aa16.59■□□□□ 0.25
MSLN-207ENST00000566549 M0QYG6 137 aa16.59■□□□□ 0.25
MSLN-207ENST00000566549 AKAIN1P0CW23 69 aa16.59■□□□□ 0.25
MSLN-207ENST00000566549 BDKRB2P30411 391 aa16.59■□□□□ 0.25
MSLN-207ENST00000566549 ZNF81P51508 661 aa16.59■□□□□ 0.25
MSLN-207ENST00000566549 CLDN6P56747 220 aa16.59■□□□□ 0.25
MSLN-207ENST00000566549 GPR85P60893 370 aa16.59■□□□□ 0.25
MSLN-207ENST00000566549 PMPCAQ10713 525 aa16.59■□□□□ 0.25
MSLN-207ENST00000566549 CSRP2Q16527 193 aa16.59■□□□□ 0.25
MSLN-207ENST00000566549 DMRTC1Q5HYR2 192 aa16.59■□□□□ 0.25
MSLN-207ENST00000566549 RNF144BQ7Z419 303 aa16.59■□□□□ 0.25
MSLN-207ENST00000566549 ABHD12BQ7Z5M8 362 aaPredicted RBP16.59■□□□□ 0.25
MSLN-207ENST00000566549 CMBLQ96DG6 245 aa16.59■□□□□ 0.25
MSLN-207ENST00000566549 UCN2Q96RP3 112 aa16.59■□□□□ 0.25
MSLN-207ENST00000566549 PROK2Q9HC23 129 aa16.59■□□□□ 0.25
MSLN-207ENST00000566549 NPDC1Q9NQX5 325 aaPredicted RBP16.59■□□□□ 0.25
MSLN-207ENST00000566549 ZNF878C9JN71 531 aa16.58■□□□□ 0.25
MSLN-207ENST00000566549 FOLR3P41439 243 aa16.58■□□□□ 0.25
MSLN-207ENST00000566549 SLC35A1P78382 337 aa16.58■□□□□ 0.25
MSLN-207ENST00000566549 OC90Q02509 493 aaPredicted RBP16.58■□□□□ 0.25
MSLN-207ENST00000566549 SGCAQ16586 387 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms