RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 RNF115Q9Y4L5 304 aa22.46■■□□□ 1.19
NME3-208ENST00000565379 RAI1Q7Z5J4 1906 aaPredicted RBP22.45■■□□□ 1.18
NME3-208ENST00000565379 OR6C6A6NF89 314 aa22.45■■□□□ 1.18
NME3-208ENST00000565379 SYNGR3O43761 229 aa22.45■■□□□ 1.18
NME3-208ENST00000565379 WBP4O75554 376 aaKnown RBP22.45■■□□□ 1.18
NME3-208ENST00000565379 MYF6P23409 242 aa22.45■■□□□ 1.18
NME3-208ENST00000565379 NAA10P41227 235 aaPredicted RBP22.45■■□□□ 1.18
NME3-208ENST00000565379 GDI2P50395 445 aaKnown RBP22.45■■□□□ 1.18
NME3-208ENST00000565379 EIF2B1Q14232 305 aaKnown RBP22.45■■□□□ 1.18
NME3-208ENST00000565379 OR51G2Q8NGK0 314 aa22.45■■□□□ 1.18
NME3-208ENST00000565379 ASB17Q8WXJ9 295 aa22.45■■□□□ 1.18
NME3-208ENST00000565379 DCLRE1CQ96SD1 692 aaKnown RBP22.45■■□□□ 1.18
NME3-208ENST00000565379 ATF6BQ99941 703 aa22.45■■□□□ 1.18
NME3-208ENST00000565379 LAMP5Q9UJQ1 280 aa22.45■■□□□ 1.18
NME3-208ENST00000565379 SPEF1Q9Y4P9 236 aa22.45■■□□□ 1.18
NME3-208ENST00000565379 USF3Q68DE3 2245 aa22.45■■□□□ 1.18
NME3-208ENST00000565379 IRGMA1A4Y4 181 aa22.44■■□□□ 1.18
NME3-208ENST00000565379 ABCD4O14678 606 aa22.44■■□□□ 1.18
NME3-208ENST00000565379 DSCAMO60469 2012 aa22.44■■□□□ 1.18
NME3-208ENST00000565379 LYNP07948 512 aa22.44■■□□□ 1.18
NME3-208ENST00000565379 CELA3BP08861 270 aa22.44■■□□□ 1.18
NME3-208ENST00000565379 HTR5AP47898 357 aa22.44■■□□□ 1.18
NME3-208ENST00000565379 CSNK2BP67870 215 aa22.44■■□□□ 1.18
NME3-208ENST00000565379 CDK5R2Q13319 367 aa22.44■■□□□ 1.18
NME3-208ENST00000565379 ARL9Q6T311 187 aa22.44■■□□□ 1.18
NME3-208ENST00000565379 UNQ6126/PRO20091Q6UXV3 157 aa22.44■■□□□ 1.18
NME3-208ENST00000565379 CFAP77Q6ZQR2 320 aa22.44■■□□□ 1.18
NME3-208ENST00000565379 OR4F15Q8NGB8 312 aa22.44■■□□□ 1.18
NME3-208ENST00000565379 ST7LQ8TDW4 575 aa22.44■■□□□ 1.18
NME3-208ENST00000565379 RNFT2Q96EX2 444 aa22.44■■□□□ 1.18
NME3-208ENST00000565379 MS4A3Q96HJ5 214 aa22.44■■□□□ 1.18
NME3-208ENST00000565379 MAP6Q96JE9 813 aa22.44■■□□□ 1.18
NME3-208ENST00000565379 POM121L2Q96KW2 1035 aa22.44■■□□□ 1.18
NME3-208ENST00000565379 MYCBPQ99417 103 aaPredicted RBP22.44■■□□□ 1.18
NME3-208ENST00000565379 CDH20Q9HBT6 801 aa22.44■■□□□ 1.18
NME3-208ENST00000565379 DDX28Q9NUL7 540 aaKnown RBP22.44■■□□□ 1.18
NME3-208ENST00000565379 MRPS18AQ9NVS2 196 aaKnown RBP22.44■■□□□ 1.18
NME3-208ENST00000565379 CADP27708 2225 aa22.43■■□□□ 1.18
NME3-208ENST00000565379 ZNF878C9JN71 531 aa22.43■■□□□ 1.18
NME3-208ENST00000565379 MRPL3P09001 348 aaKnown RBP22.43■■□□□ 1.18
NME3-208ENST00000565379 OR2T7P0C7T2 308 aa22.43■■□□□ 1.18
NME3-208ENST00000565379 DBTP11182 482 aaKnown RBP22.43■■□□□ 1.18
NME3-208ENST00000565379 ZNF35P13682 527 aa22.43■■□□□ 1.18
NME3-208ENST00000565379 ALOX5APP20292 161 aa22.43■■□□□ 1.18
NME3-208ENST00000565379 APEX1P27695 318 aaKnown RBP22.43■■□□□ 1.18
NME3-208ENST00000565379 RPS27P42677 84 aaKnown RBP22.43■■□□□ 1.18
NME3-208ENST00000565379 SLC15A1P46059 708 aa22.43■■□□□ 1.18
NME3-208ENST00000565379 RAB40BQ12829 278 aa22.43■■□□□ 1.18
NME3-208ENST00000565379 KLHL22Q53GT1 634 aa22.43■■□□□ 1.18
NME3-208ENST00000565379 KCTD18Q6PI47 426 aaPredicted RBP22.43■■□□□ 1.18
NME3-208ENST00000565379 SLC35F2Q8IXU6 374 aa22.43■■□□□ 1.18
NME3-208ENST00000565379 C1orf174Q8IYL3 243 aa22.43■■□□□ 1.18
NME3-208ENST00000565379 PIAS4Q8N2W9 510 aaPredicted RBP22.43■■□□□ 1.18
NME3-208ENST00000565379 OR2T27Q8NH04 317 aa22.43■■□□□ 1.18
NME3-208ENST00000565379 CNIH3Q8TBE1 160 aa22.43■■□□□ 1.18
NME3-208ENST00000565379 SLAMF6Q96DU3 332 aa22.43■■□□□ 1.18
NME3-208ENST00000565379 ABHD6Q9BV23 337 aa22.43■■□□□ 1.18
NME3-208ENST00000565379 PNRC2Q9NPJ4 139 aaKnown RBP22.43■■□□□ 1.18
NME3-208ENST00000565379 BEX4Q9NWD9 120 aaPredicted RBP22.43■■□□□ 1.18
NME3-208ENST00000565379 IGHV2OR16-5A0A0B4J2B6 119 aa22.42■■□□□ 1.18
NME3-208ENST00000565379 PCSK6P29122 969 aa22.42■■□□□ 1.18
NME3-208ENST00000565379 GRB2P62993 217 aaKnown RBP22.42■■□□□ 1.18
NME3-208ENST00000565379 ACTC1P68032 377 aa22.42■■□□□ 1.18
NME3-208ENST00000565379 ACTA1P68133 377 aa22.42■■□□□ 1.18
NME3-208ENST00000565379 GALK2Q01415 458 aa22.42■■□□□ 1.18
NME3-208ENST00000565379 ZNF91Q05481 1191 aa22.42■■□□□ 1.18
NME3-208ENST00000565379 DEGS2Q6QHC5 323 aa22.42■■□□□ 1.18
NME3-208ENST00000565379 SLC22A25Q6T423 547 aa22.42■■□□□ 1.18
NME3-208ENST00000565379 MYPOPQ86VE0 399 aaPredicted RBP22.42■■□□□ 1.18
NME3-208ENST00000565379 THEM6Q8WUY1 208 aa22.42■■□□□ 1.18
NME3-208ENST00000565379 RNF133Q8WVZ7 376 aa22.42■■□□□ 1.18
NME3-208ENST00000565379 SPTSSAQ969W0 71 aa22.42■■□□□ 1.18
NME3-208ENST00000565379 EIF3KQ9UBQ5 218 aaKnown RBP22.42■■□□□ 1.18
NME3-208ENST00000565379 AASSQ9UDR5 926 aa22.42■■□□□ 1.18
NME3-208ENST00000565379 EXOGQ9Y2C4 368 aaKnown RBP22.42■■□□□ 1.18
NME3-208ENST00000565379 ABCA2Q9BZC7 2435 aa22.41■■□□□ 1.18
NME3-208ENST00000565379 ZNF670-ZNF695F2Z2N8 137 aa22.41■■□□□ 1.18
NME3-208ENST00000565379 FADS2O95864 444 aaKnown RBP22.41■■□□□ 1.18
NME3-208ENST00000565379 PSKH1P11801 424 aa22.41■■□□□ 1.18
NME3-208ENST00000565379 CXCR4P61073 352 aa22.41■■□□□ 1.18
NME3-208ENST00000565379 ADAM5Q6NVV9 412 aa22.41■■□□□ 1.18
NME3-208ENST00000565379 TMEM154Q6P9G4 183 aa22.41■■□□□ 1.18
NME3-208ENST00000565379 ZNF704Q6ZNC4 412 aaPredicted RBP22.41■■□□□ 1.18
NME3-208ENST00000565379 BIVMQ86UB2 503 aa22.41■■□□□ 1.18
NME3-208ENST00000565379 SMR3AQ99954 134 aa22.41■■□□□ 1.18
NME3-208ENST00000565379 LOC100509620A0A075B734 347 aa22.4■■□□□ 1.18
NME3-208ENST00000565379 C5orf49A4QMS7 147 aa22.4■■□□□ 1.18
NME3-208ENST00000565379 J3QW42 95 aa22.4■■□□□ 1.18
NME3-208ENST00000565379 ICMTO60725 284 aa22.4■■□□□ 1.18
NME3-208ENST00000565379 APOC1P02654 83 aa22.4■■□□□ 1.18
NME3-208ENST00000565379 CALCRP30988 508 aa22.4■■□□□ 1.18
NME3-208ENST00000565379 RGS6P49758 472 aa22.4■■□□□ 1.18
NME3-208ENST00000565379 NKX6-1P78426 367 aaPredicted RBP22.4■■□□□ 1.18
NME3-208ENST00000565379 TAF13Q15543 124 aa22.4■■□□□ 1.18
NME3-208ENST00000565379 NUP37Q8NFH4 326 aa22.4■■□□□ 1.18
NME3-208ENST00000565379 COPS4Q9BT78 406 aa22.4■■□□□ 1.18
NME3-208ENST00000565379 NIPAL2Q9H841 368 aa22.4■■□□□ 1.18
NME3-208ENST00000565379 ELOVL3Q9HB03 270 aa22.4■■□□□ 1.18
NME3-208ENST00000565379 CENPMQ9NSP4 180 aa22.4■■□□□ 1.18
NME3-208ENST00000565379 PLCXD1Q9NUJ7 323 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms