RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 COX10Q12887 443 aa8.55□□□□□ -1.04
SF3B3-204ENST00000563739 SCARB2Q14108 478 aa8.55□□□□□ -1.04
SF3B3-204ENST00000563739 SELPLGQ14242 412 aa8.55□□□□□ -1.04
SF3B3-204ENST00000563739 TAF11Q15544 211 aa8.55□□□□□ -1.04
SF3B3-204ENST00000563739 SGCAQ16586 387 aa8.55□□□□□ -1.04
SF3B3-204ENST00000563739 ZNF181Q2M3W8 571 aa8.55□□□□□ -1.04
SF3B3-204ENST00000563739 OXLD1Q5BKU9 147 aa8.55□□□□□ -1.04
SF3B3-204ENST00000563739 GPR157Q5UAW9 335 aa8.55□□□□□ -1.04
SF3B3-204ENST00000563739 NANOGNBQ7Z5D8 188 aa8.55□□□□□ -1.04
SF3B3-204ENST00000563739 NKAIN4Q8IVV8 208 aa8.55□□□□□ -1.04
SF3B3-204ENST00000563739 LRRC75AQ8NAA5 344 aa8.55□□□□□ -1.04
SF3B3-204ENST00000563739 CFHR4Q92496 578 aa8.55□□□□□ -1.04
SF3B3-204ENST00000563739 HAVCR1Q96D42 359 aa8.55□□□□□ -1.04
SF3B3-204ENST00000563739 PCGF1Q9BSM1 259 aa8.55□□□□□ -1.04
SF3B3-204ENST00000563739 CCNB1IP1Q9NPC3 277 aa8.55□□□□□ -1.04
SF3B3-204ENST00000563739 MAN2C1Q9NTJ4 1040 aa8.55□□□□□ -1.04
SF3B3-204ENST00000563739 TBCCD1Q9NVR7 557 aa8.55□□□□□ -1.04
SF3B3-204ENST00000563739 MIOXQ9UGB7 285 aa8.55□□□□□ -1.04
SF3B3-204ENST00000563739 SIGLEC9Q9Y336 463 aa8.55□□□□□ -1.04
SF3B3-204ENST00000563739 CAPN7Q9Y6W3 813 aa8.55□□□□□ -1.04
SF3B3-204ENST00000563739 ZNF879B4DU55 563 aa8.54□□□□□ -1.04
SF3B3-204ENST00000563739 C5orf58C9J3I9 102 aa8.54□□□□□ -1.04
SF3B3-204ENST00000563739 F5H5P2 479 aa8.54□□□□□ -1.04
SF3B3-204ENST00000563739 P2RY10O00398 339 aa8.54□□□□□ -1.04
SF3B3-204ENST00000563739 ANGPT2O15123 496 aa8.54□□□□□ -1.04
SF3B3-204ENST00000563739 SLC22A2O15244 555 aa8.54□□□□□ -1.04
SF3B3-204ENST00000563739 OR7A10O76100 309 aa8.54□□□□□ -1.04
SF3B3-204ENST00000563739 OR6A2O95222 327 aa8.54□□□□□ -1.04
SF3B3-204ENST00000563739 ABHD16AO95870 558 aa8.54□□□□□ -1.04
SF3B3-204ENST00000563739 CRYBA1P05813 215 aa8.54□□□□□ -1.04
SF3B3-204ENST00000563739 CSF1P09603 554 aa8.54□□□□□ -1.04
SF3B3-204ENST00000563739 GPX2P18283 190 aa8.54□□□□□ -1.04
SF3B3-204ENST00000563739 CPT2P23786 658 aa8.54□□□□□ -1.04
SF3B3-204ENST00000563739 BPIFB3P59826 476 aa8.54□□□□□ -1.04
SF3B3-204ENST00000563739 KLF10Q13118 480 aa8.54□□□□□ -1.04
SF3B3-204ENST00000563739 TRPM8Q7Z2W7 1104 aa8.54□□□□□ -1.04
SF3B3-204ENST00000563739 MOGAT3Q86VF5 341 aa8.54□□□□□ -1.04
SF3B3-204ENST00000563739 ARMC8Q8IUR7 673 aa8.54□□□□□ -1.04
SF3B3-204ENST00000563739 OR5AS1Q8N127 324 aa8.54□□□□□ -1.04
SF3B3-204ENST00000563739 NPEPL1Q8NDH3 523 aa8.54□□□□□ -1.04
SF3B3-204ENST00000563739 MRAPQ8TCY5 172 aa8.54□□□□□ -1.04
SF3B3-204ENST00000563739 TSPEARQ8WU66 669 aa8.54□□□□□ -1.04
SF3B3-204ENST00000563739 LIPHQ8WWY8 451 aa8.54□□□□□ -1.04
SF3B3-204ENST00000563739 TAMM41Q96BW9 452 aa8.54□□□□□ -1.04
SF3B3-204ENST00000563739 SLC19A3Q9BZV2 496 aa8.54□□□□□ -1.04
SF3B3-204ENST00000563739 TOR3AQ9H497 397 aa8.54□□□□□ -1.04
SF3B3-204ENST00000563739 NANOGQ9H9S0 305 aa8.54□□□□□ -1.04
SF3B3-204ENST00000563739 CACYBPQ9HB71 228 aaKnown RBP8.54□□□□□ -1.04
SF3B3-204ENST00000563739 EMC7Q9NPA0 242 aa8.54□□□□□ -1.04
SF3B3-204ENST00000563739 POLE4Q9NR33 117 aa8.54□□□□□ -1.04
SF3B3-204ENST00000563739 INIPQ9NRY2 104 aa8.54□□□□□ -1.04
SF3B3-204ENST00000563739 ACOXLQ9NUZ1 547 aa8.54□□□□□ -1.04
SF3B3-204ENST00000563739 ZNRD1Q9P1U0 126 aa8.54□□□□□ -1.04
SF3B3-204ENST00000563739 EIF3KQ9UBQ5 218 aaKnown RBP8.54□□□□□ -1.04
SF3B3-204ENST00000563739 STARD9Q9P2P6 4700 aa8.54□□□□□ -1.04
SF3B3-204ENST00000563739 ZNF816-ZNF321PA0A0X1KG74 233 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 A0A1B0GW55 424 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 TRAPPC13A5PLN9 417 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 TMEM247A6NEH6 219 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 OR6C6A6NF89 314 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 ADARB2-AS1A8MUL3 147 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 ANKRD65E5RJM6 399 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 BLOC1S5-TXNDC5H3BN57 136 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 ENSAO43768 121 aaKnown RBP8.53□□□□□ -1.04
SF3B3-204ENST00000563739 PIP5K1CO60331 668 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 DBHP09172 617 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 DUX4L2P0CJ85 424 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 DUX4L3P0CJ86 424 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 DUX4L4P0CJ87 422 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 DUX4L5P0CJ88 424 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 DUX4L6P0CJ89 424 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 DUX4L7P0CJ90 424 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 COX5BP10606 129 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 EFNB2P52799 333 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 DLX1P56177 255 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 ELF3P78545 371 aaPredicted RBP8.53□□□□□ -1.04
SF3B3-204ENST00000563739 PRB3Q04118 309 aaPredicted RBP8.53□□□□□ -1.04
SF3B3-204ENST00000563739 MAB21L1Q13394 359 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 MAPRE2Q15555 327 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 COQ5Q5HYK3 327 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 OR2T2Q6IF00 324 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 TTC33Q6PID6 262 aaPredicted RBP8.53□□□□□ -1.04
SF3B3-204ENST00000563739 DUX4L9Q6RFH8 374 aaPredicted RBP8.53□□□□□ -1.04
SF3B3-204ENST00000563739 DLEU7Q6UYE1 221 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 FBXW12Q6X9E4 464 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 VASH1Q7L8A9 365 aaPredicted RBP8.53□□□□□ -1.04
SF3B3-204ENST00000563739 DHDDSQ86SQ9 333 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 DPP10Q8N608 796 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 OR8B3Q8NGG8 313 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 VANGL1Q8TAA9 524 aaPredicted RBP8.53□□□□□ -1.04
SF3B3-204ENST00000563739 TMEM255BQ8WV15 326 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 ITPKCQ96DU7 683 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 WDFY2Q96P53 400 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 OR8B2Q96RD0 313 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 SLC30A2Q9BRI3 323 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 SPATA5L1Q9BVQ7 753 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 ELOVL3Q9HB03 270 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 DUX4Q9UBX2 424 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 CLN8Q9UBY8 286 aa8.53□□□□□ -1.04
SF3B3-204ENST00000563739 TMCC3Q9ULS5 477 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms