RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 ZNF511Q8NB15 262 aa17.34■□□□□ 0.37
CMTM3-206ENST00000563672 MAPK1IP1LQ8NDC0 245 aa17.34■□□□□ 0.37
CMTM3-206ENST00000563672 IPCEF1Q8WWN9 437 aaPredicted RBP17.34■□□□□ 0.37
CMTM3-206ENST00000563672 MAP6Q96JE9 813 aa17.34■□□□□ 0.37
CMTM3-206ENST00000563672 SLC25A19Q9HC21 320 aa17.34■□□□□ 0.37
CMTM3-206ENST00000563672 HINT3Q9NQE9 182 aaKnown RBP17.34■□□□□ 0.37
CMTM3-206ENST00000563672 PAPOLBQ9NRJ5 636 aaKnown RBP17.34■□□□□ 0.37
CMTM3-206ENST00000563672 STARD10Q9Y365 291 aa17.34■□□□□ 0.37
CMTM3-206ENST00000563672 COMMD3-BMI1R4GMX3 469 aa17.34■□□□□ 0.37
CMTM3-206ENST00000563672 FAM183AA6NL82 134 aa17.33■□□□□ 0.36
CMTM3-206ENST00000563672 C17orf100A8MU93 164 aa17.33■□□□□ 0.36
CMTM3-206ENST00000563672 SURF4O15260 269 aa17.33■□□□□ 0.36
CMTM3-206ENST00000563672 HMGN1P05114 100 aa17.33■□□□□ 0.36
CMTM3-206ENST00000563672 RGS6P49758 472 aa17.33■□□□□ 0.36
CMTM3-206ENST00000563672 BLVRAP53004 296 aa17.33■□□□□ 0.36
CMTM3-206ENST00000563672 ECH1Q13011 328 aa17.33■□□□□ 0.36
CMTM3-206ENST00000563672 ALKBH6Q3KRA9 238 aa17.33■□□□□ 0.36
CMTM3-206ENST00000563672 TEX30Q5JUR7 227 aa17.33■□□□□ 0.36
CMTM3-206ENST00000563672 ZDHHC13Q8IUH4 622 aa17.33■□□□□ 0.36
CMTM3-206ENST00000563672 ZNF786Q8N393 782 aa17.33■□□□□ 0.36
CMTM3-206ENST00000563672 UBASH3BQ8TF42 649 aa17.33■□□□□ 0.36
CMTM3-206ENST00000563672 PITX2Q99697 317 aa17.33■□□□□ 0.36
CMTM3-206ENST00000563672 GABARAPL1Q9H0R8 117 aa17.33■□□□□ 0.36
CMTM3-206ENST00000563672 POFUT1Q9H488 388 aa17.33■□□□□ 0.36
CMTM3-206ENST00000563672 MED20Q9H944 212 aa17.33■□□□□ 0.36
CMTM3-206ENST00000563672 WDR76Q9H967 626 aa17.33■□□□□ 0.36
CMTM3-206ENST00000563672 KIF17Q9P2E2 1029 aa17.33■□□□□ 0.36
CMTM3-206ENST00000563672 NSD1Q96L73 2696 aaPredicted RBP17.32■□□□□ 0.36
CMTM3-206ENST00000563672 J3QW42 95 aa17.32■□□□□ 0.36
CMTM3-206ENST00000563672 HPXP02790 462 aa17.32■□□□□ 0.36
CMTM3-206ENST00000563672 HEXAP06865 529 aa17.32■□□□□ 0.36
CMTM3-206ENST00000563672 PSKH1P11801 424 aa17.32■□□□□ 0.36
CMTM3-206ENST00000563672 RPS27P42677 84 aaKnown RBP17.32■□□□□ 0.36
CMTM3-206ENST00000563672 MMP15P51511 669 aa17.32■□□□□ 0.36
CMTM3-206ENST00000563672 CRISP1P54107 249 aa17.32■□□□□ 0.36
CMTM3-206ENST00000563672 KRTAP1-1Q07627 177 aa17.32■□□□□ 0.36
CMTM3-206ENST00000563672 LOXL1Q08397 574 aaPredicted RBP17.32■□□□□ 0.36
CMTM3-206ENST00000563672 KPNB1Q14974 876 aaKnown RBP17.32■□□□□ 0.36
CMTM3-206ENST00000563672 TMEM236Q5W0B7 351 aa17.32■□□□□ 0.36
CMTM3-206ENST00000563672 TMEM154Q6P9G4 183 aa17.32■□□□□ 0.36
CMTM3-206ENST00000563672 COLCA1Q6ZS62 124 aa17.32■□□□□ 0.36
CMTM3-206ENST00000563672 OR10S1Q8NGN2 331 aa17.32■□□□□ 0.36
CMTM3-206ENST00000563672 SNX33Q8WV41 574 aa17.32■□□□□ 0.36
CMTM3-206ENST00000563672 CENPNQ96H22 339 aaPredicted RBP17.32■□□□□ 0.36
CMTM3-206ENST00000563672 COG8Q96MW5 612 aa17.32■□□□□ 0.36
CMTM3-206ENST00000563672 NKIRAS2Q9NYR9 191 aa17.32■□□□□ 0.36
CMTM3-206ENST00000563672 NIPBLQ6KC79 2804 aaeCLIP17.31■□□□□ 0.36
CMTM3-206ENST00000563672 ZNF23P17027 643 aa17.31■□□□□ 0.36
CMTM3-206ENST00000563672 PAICSP22234 425 aaKnown RBP17.31■□□□□ 0.36
CMTM3-206ENST00000563672 GIFP27352 417 aa17.31■□□□□ 0.36
CMTM3-206ENST00000563672 NR4A2P43354 598 aa17.31■□□□□ 0.36
CMTM3-206ENST00000563672 ENTPD1P49961 510 aa17.31■□□□□ 0.36
CMTM3-206ENST00000563672 ESRRGP62508 458 aa17.31■□□□□ 0.36
CMTM3-206ENST00000563672 PSG7Q13046 419 aa17.31■□□□□ 0.36
CMTM3-206ENST00000563672 KDM4DQ6B0I6 523 aa17.31■□□□□ 0.36
CMTM3-206ENST00000563672 OR6K6Q8NGW6 343 aa17.31■□□□□ 0.36
CMTM3-206ENST00000563672 PYDC1Q8WXC3 89 aa17.31■□□□□ 0.36
CMTM3-206ENST00000563672 GTF3AQ92664 365 aaKnown RBP17.31■□□□□ 0.36
CMTM3-206ENST00000563672 ATF6BQ99941 703 aa17.31■□□□□ 0.36
CMTM3-206ENST00000563672 PIMREGQ9BSJ6 248 aa17.31■□□□□ 0.36
CMTM3-206ENST00000563672 MARCH7Q9H992 704 aa17.31■□□□□ 0.36
CMTM3-206ENST00000563672 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.31■□□□□ 0.36
CMTM3-206ENST00000563672 PRR23D1E9PI22 279 aaPredicted RBP17.3■□□□□ 0.36
CMTM3-206ENST00000563672 ZNF593O00488 134 aaPredicted RBP17.3■□□□□ 0.36
CMTM3-206ENST00000563672 MITFO75030 526 aaPredicted RBP17.3■□□□□ 0.36
CMTM3-206ENST00000563672 NCR1O76036 304 aa17.3■□□□□ 0.36
CMTM3-206ENST00000563672 GLCEO94923 617 aa17.3■□□□□ 0.36
CMTM3-206ENST00000563672 ACSM4P0C7M7 580 aa17.3■□□□□ 0.36
CMTM3-206ENST00000563672 PRR23D2P0DMB1 279 aaPredicted RBP17.3■□□□□ 0.36
CMTM3-206ENST00000563672 MAGEB1P43366 347 aa17.3■□□□□ 0.36
CMTM3-206ENST00000563672 CARTPTQ16568 116 aa17.3■□□□□ 0.36
CMTM3-206ENST00000563672 PCGF3Q3KNV8 242 aa17.3■□□□□ 0.36
CMTM3-206ENST00000563672 PLBD1Q6P4A8 553 aa17.3■□□□□ 0.36
CMTM3-206ENST00000563672 Q71RC1 249 aaPredicted RBP17.3■□□□□ 0.36
CMTM3-206ENST00000563672 ZNF540Q8NDQ6 660 aa17.3■□□□□ 0.36
CMTM3-206ENST00000563672 APOBEC3DQ96AK3 386 aaPredicted RBP17.3■□□□□ 0.36
CMTM3-206ENST00000563672 OTULINQ96BN8 352 aa17.3■□□□□ 0.36
CMTM3-206ENST00000563672 HAVCR1Q96D42 359 aa17.3■□□□□ 0.36
CMTM3-206ENST00000563672 C1QTNF5Q9BXJ0 243 aa17.3■□□□□ 0.36
CMTM3-206ENST00000563672 SEMA6AQ9H2E6 1030 aa17.3■□□□□ 0.36
CMTM3-206ENST00000563672 KRT84Q9NSB2 600 aa17.3■□□□□ 0.36
CMTM3-206ENST00000563672 DDX28Q9NUL7 540 aaKnown RBP17.3■□□□□ 0.36
CMTM3-206ENST00000563672 LYNX1G3V0Z9 82 aa17.29■□□□□ 0.36
CMTM3-206ENST00000563672 H3BNX3 289 aa17.29■□□□□ 0.36
CMTM3-206ENST00000563672 MT-ND5P03915 603 aa17.29■□□□□ 0.36
CMTM3-206ENST00000563672 SPARCP09486 303 aa17.29■□□□□ 0.36
CMTM3-206ENST00000563672 LYNX1P0DP58 116 aa17.29■□□□□ 0.36
CMTM3-206ENST00000563672 KITLGP21583 273 aa17.29■□□□□ 0.36
CMTM3-206ENST00000563672 USF1P22415 310 aaPredicted RBP17.29■□□□□ 0.36
CMTM3-206ENST00000563672 COL8A2P25067 703 aa17.29■□□□□ 0.36
CMTM3-206ENST00000563672 LIPAP38571 399 aa17.29■□□□□ 0.36
CMTM3-206ENST00000563672 ZNF81P51508 661 aa17.29■□□□□ 0.36
CMTM3-206ENST00000563672 MRPS11P82912 194 aaKnown RBP17.29■□□□□ 0.36
CMTM3-206ENST00000563672 RIN1Q13671 783 aa17.29■□□□□ 0.36
CMTM3-206ENST00000563672 PTGES3Q15185 160 aaKnown RBP17.29■□□□□ 0.36
CMTM3-206ENST00000563672 DCXRQ7Z4W1 244 aa17.29■□□□□ 0.36
CMTM3-206ENST00000563672 CPOQ8IVL8 374 aa17.29■□□□□ 0.36
CMTM3-206ENST00000563672 OR5L1Q8NGL2 311 aa17.29■□□□□ 0.36
CMTM3-206ENST00000563672 RDH5Q92781 318 aa17.29■□□□□ 0.36
CMTM3-206ENST00000563672 CMBLQ96DG6 245 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms