RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 HCFC1P51610 2035 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 HEATR5AQ86XA9 2040 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 MPDZO75970 2070 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 IGHV3-20A0A0C4DH32 117 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 RNF222A6NCQ9 220 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 SAGE2PA6NJ88 616 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 ZSCAN5BA6NJL1 495 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 K7EQD1 137 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 PSMD12O00232 456 aaPredicted RBP3.92□□□□□ -1.78
LINC00254-201ENST00000563416 UBFD1O14562 309 aaKnown RBP3.92□□□□□ -1.78
LINC00254-201ENST00000563416 MLNRO43193 412 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 DPM1O60762 260 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 B4GALT2O60909 372 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 CTNSO60931 367 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 PDYNP01213 254 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 MYL2P10916 166 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 ICAM2P13598 275 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 TSPAN8P19075 237 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 GPX3P22352 226 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 SSR2P43308 183 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 PLA2G16P53816 162 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 PKNOX1P55347 436 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 PPIAP62937 165 aaKnown RBP3.92□□□□□ -1.78
LINC00254-201ENST00000563416 BTG2P78543 158 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 IFFO1Q0D2I5 559 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 NSDHLQ15738 373 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 ZNF239Q16600 458 aaKnown RBP3.92□□□□□ -1.78
LINC00254-201ENST00000563416 MS4A18Q3C1V0 323 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 LRRC37A5PQ49AS3 106 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 ACSF3Q4G176 576 aaPredicted RBP3.92□□□□□ -1.78
LINC00254-201ENST00000563416 SFT2D3Q587I9 215 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 BEND6Q5SZJ8 279 aaPredicted RBP3.92□□□□□ -1.78
LINC00254-201ENST00000563416 DDI2Q5TDH0 399 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 CCBE1Q6UXH8 406 aaPredicted RBP3.92□□□□□ -1.78
LINC00254-201ENST00000563416 Q6ZS92 163 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 RNF165Q6ZSG1 346 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 CROCCP2Q86T23 111 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 Q8N377 158 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 PARP8Q8N3A8 854 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 NFAM1Q8NET5 270 aaPredicted RBP3.92□□□□□ -1.78
LINC00254-201ENST00000563416 M1APQ8TC57 530 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 NPRL2Q8WTW4 380 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 PNPLA2Q96AD5 504 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 C11orf24Q96F05 449 aaPredicted RBP3.92□□□□□ -1.78
LINC00254-201ENST00000563416 SLC41A3Q96GZ6 507 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 FAM218AQ96MZ4 157 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 FOXN4Q96NZ1 517 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 ZIM3Q96PE6 472 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 SERPINI1Q99574 410 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 MAPKAP1Q9BPZ7 522 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 CENPKQ9BS16 269 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 ELOVL6Q9H5J4 265 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 ADAP2Q9NPF8 381 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 PRTFDC1Q9NRG1 225 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 LYARQ9NX58 379 aaKnown RBP3.92□□□□□ -1.78
LINC00254-201ENST00000563416 MS4A12Q9NXJ0 267 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 MIOXQ9UGB7 285 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 CHRNA9Q9UGM1 479 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 PHF11Q9UIL8 331 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 PLLPQ9Y342 182 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 OR10H1Q9Y4A9 318 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 ASB4Q9Y574 426 aa3.92□□□□□ -1.78
LINC00254-201ENST00000563416 SPTAN1Q13813 2472 aaKnown RBP3.92□□□□□ -1.78
LINC00254-201ENST00000563416 SPTBN1Q01082 2364 aaKnown RBP3.91□□□□□ -1.78
LINC00254-201ENST00000563416 ASH1LQ9NR48 2969 aaKnown RBP3.91□□□□□ -1.78
LINC00254-201ENST00000563416 MED12LQ86YW9 2145 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 A8MXK9 166 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 PPIAL4DF5H284 164 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 SAP18O00422 153 aaKnown RBP3.91□□□□□ -1.78
LINC00254-201ENST00000563416 MANBAO00462 879 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 CASQ2O14958 399 aaPredicted RBP3.91□□□□□ -1.78
LINC00254-201ENST00000563416 SH3BGRLO75368 114 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 SPAG7O75391 227 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 ERLIN1O75477 346 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 EEDO75530 441 aaKnown RBP3.91□□□□□ -1.78
LINC00254-201ENST00000563416 ANP32DO95626 131 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 AIFM1O95831 613 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 KRT6AP02538 564 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 CPN2P22792 545 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 PAX7P23759 505 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 GATA2P23769 480 aaPredicted RBP3.91□□□□□ -1.78
LINC00254-201ENST00000563416 PPP2R1BP30154 601 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 ALDH3A1P30838 453 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 TAGLN2P37802 199 aaKnown RBP3.91□□□□□ -1.78
LINC00254-201ENST00000563416 RAP1GDS1P52306 607 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 FOXA1P55317 472 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 OR4D2P58180 307 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 ACTR3P61158 418 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 ERVK-8P63133 956 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 ASPHQ12797 758 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 COX10Q12887 443 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 IFT88Q13099 833 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 SLAMF1Q13291 335 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 BIKQ13323 160 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 SERTAD2Q14140 314 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 TRIP10Q15642 601 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 KCTD21Q4G0X4 260 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 TCHHL1Q5QJ38 904 aaPredicted RBP3.91□□□□□ -1.78
LINC00254-201ENST00000563416 AGAP7PQ5VUJ5 663 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 TTC23Q5W5X9 447 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms