RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 TAF9BQ9HBM6 251 aa10.24□□□□□ -0.77
RPAP1-204ENST00000562303 DLL4Q9NR61 685 aa10.24□□□□□ -0.77
RPAP1-204ENST00000562303 KCNG2Q9UJ96 466 aa10.24□□□□□ -0.77
RPAP1-204ENST00000562303 TRABD2BA6NFA1 517 aa10.24□□□□□ -0.77
RPAP1-204ENST00000562303 FABP7O15540 132 aa10.24□□□□□ -0.77
RPAP1-204ENST00000562303 PIAS2O75928 621 aa10.24□□□□□ -0.77
RPAP1-204ENST00000562303 SIX6O95475 246 aa10.24□□□□□ -0.77
RPAP1-204ENST00000562303 SRP14P37108 136 aaKnown RBP10.24□□□□□ -0.77
RPAP1-204ENST00000562303 EMC4Q5J8M3 183 aa10.24□□□□□ -0.77
RPAP1-204ENST00000562303 SEC22CQ9BRL7 303 aa10.24□□□□□ -0.77
RPAP1-204ENST00000562303 KRBOX1C9JBD0 128 aa10.24□□□□□ -0.77
RPAP1-204ENST00000562303 ANGPTL7O43827 346 aa10.24□□□□□ -0.77
RPAP1-204ENST00000562303 HNF1AP20823 631 aa10.24□□□□□ -0.77
RPAP1-204ENST00000562303 OR10A3P58181 314 aa10.24□□□□□ -0.77
RPAP1-204ENST00000562303 GPR84Q9NQS5 396 aa10.24□□□□□ -0.77
RPAP1-204ENST00000562303 ONECUT1Q9UBC0 465 aa10.24□□□□□ -0.77
RPAP1-204ENST00000562303 CLEC2DQ9UHP7 191 aa10.24□□□□□ -0.77
RPAP1-204ENST00000562303 V9GYS6 101 aa10.24□□□□□ -0.77
RPAP1-204ENST00000562303 SDK1Q7Z5N4 2213 aa10.24□□□□□ -0.77
RPAP1-204ENST00000562303 LINC01565O15544 149 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 GOSR1O95249 250 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 GLI4P10075 376 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 OR5I1Q13606 314 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 MOB3BQ86TA1 216 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 PCNPQ8WW12 178 aaKnown RBP10.23□□□□□ -0.77
RPAP1-204ENST00000562303 C20orf27Q9GZN8 174 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 NARFLQ9H6Q4 476 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 FAM221AA4D161 298 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 TMEM200CA6NKL6 621 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 GLULP15104 373 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 SHBQ15464 509 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 TAF9Q16594 264 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 OR10K2Q6IF99 312 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 OR10R2Q8NGX6 335 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 TIMM9Q9Y5J7 89 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 SPRY3O43610 288 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 MYF5P13349 255 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 HIST1H1CP16403 213 aaKnown RBP10.23□□□□□ -0.77
RPAP1-204ENST00000562303 ADRA2CP18825 462 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 CCR9P51686 369 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 GFERP55789 205 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 ARIH2OSQ8N7S6 290 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 MOB3AQ96BX8 217 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 PARP12Q9H0J9 701 aaKnown RBP10.23□□□□□ -0.77
RPAP1-204ENST00000562303 LIN7CQ9NUP9 197 aaKnown RBP10.23□□□□□ -0.77
RPAP1-204ENST00000562303 XKRY2A2RUG3 117 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 PLRG1O43660 514 aaKnown RBP10.23□□□□□ -0.77
RPAP1-204ENST00000562303 PRKNO60260 465 aaPredicted RBP10.23□□□□□ -0.77
RPAP1-204ENST00000562303 HAAOP46952 286 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 FCN2Q15485 313 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 HLA-BQ31612 363 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 KMT5CQ86Y97 462 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 OR10P1Q8NGE3 313 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 MRGPRX4Q96LA9 322 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 MKRN2Q9H000 416 aaKnown RBP10.23□□□□□ -0.77
RPAP1-204ENST00000562303 MED29Q9NX70 200 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 ZNF835Q9Y2P0 537 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 NAV1Q8NEY1 1877 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 MN1Q10571 1320 aaPredicted RBP10.23□□□□□ -0.77
RPAP1-204ENST00000562303 GFYI3L273 518 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 HMGN4O00479 90 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 OR7C2O60412 319 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 B4GALT1P15291 398 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 SPEM2Q0P670 501 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 RAB35Q15286 201 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 MVB12AQ96EY5 273 aa10.23□□□□□ -0.77
RPAP1-204ENST00000562303 NDUFB3O43676 98 aa10.22□□□□□ -0.77
RPAP1-204ENST00000562303 SBK2P0C263 348 aa10.22□□□□□ -0.77
RPAP1-204ENST00000562303 H2AFB1P0C5Y9 115 aa10.22□□□□□ -0.77
RPAP1-204ENST00000562303 SPI1P17947 270 aa10.22□□□□□ -0.77
RPAP1-204ENST00000562303 GPX2P18283 190 aa10.22□□□□□ -0.77
RPAP1-204ENST00000562303 SNRPGP62308 76 aaKnown RBP10.22□□□□□ -0.77
RPAP1-204ENST00000562303 LRRC10Q5BKY1 277 aa10.22□□□□□ -0.77
RPAP1-204ENST00000562303 CAMKMTQ7Z624 323 aa10.22□□□□□ -0.77
RPAP1-204ENST00000562303 SLC51BQ86UW2 128 aa10.22□□□□□ -0.77
RPAP1-204ENST00000562303 OR2V1Q8NHB1 315 aa10.22□□□□□ -0.77
RPAP1-204ENST00000562303 C16orf52Q8NHV5 167 aa10.22□□□□□ -0.77
RPAP1-204ENST00000562303 M1APQ8TC57 530 aa10.22□□□□□ -0.77
RPAP1-204ENST00000562303 ST8SIA4Q92187 359 aa10.22□□□□□ -0.77
RPAP1-204ENST00000562303 GATA6Q92908 595 aa10.22□□□□□ -0.77
RPAP1-204ENST00000562303 JAM3Q9BX67 310 aa10.22□□□□□ -0.77
RPAP1-204ENST00000562303 LTB4R2Q9NPC1 389 aa10.22□□□□□ -0.77
RPAP1-204ENST00000562303 A0A087WZY1 265 aa10.22□□□□□ -0.77
RPAP1-204ENST00000562303 C7orf72A4D263 438 aa10.22□□□□□ -0.77
RPAP1-204ENST00000562303 CASP3P42574 277 aa10.22□□□□□ -0.77
RPAP1-204ENST00000562303 RPL18Q07020 188 aaKnown RBP10.22□□□□□ -0.77
RPAP1-204ENST00000562303 AKR1E2Q96JD6 320 aa10.22□□□□□ -0.77
RPAP1-204ENST00000562303 LYSMD1Q96S90 227 aa10.22□□□□□ -0.77
RPAP1-204ENST00000562303 ZNF251Q9BRH9 671 aa10.22□□□□□ -0.77
RPAP1-204ENST00000562303 SERTM1A2A2V5 107 aa10.22□□□□□ -0.77
RPAP1-204ENST00000562303 CITO14578 2027 aa10.22□□□□□ -0.77
RPAP1-204ENST00000562303 SMIM17P0DL12 118 aa10.22□□□□□ -0.77
RPAP1-204ENST00000562303 EXOSC2Q13868 293 aaKnown RBP10.22□□□□□ -0.77
RPAP1-204ENST00000562303 PCK2Q16822 640 aa10.22□□□□□ -0.77
RPAP1-204ENST00000562303 TCTN3Q6NUS6 607 aa10.22□□□□□ -0.77
RPAP1-204ENST00000562303 RHOUQ7L0Q8 258 aa10.22□□□□□ -0.77
RPAP1-204ENST00000562303 OR52H1Q8NGJ2 320 aa10.22□□□□□ -0.77
RPAP1-204ENST00000562303 OR1J1Q8NGS3 322 aa10.22□□□□□ -0.77
RPAP1-204ENST00000562303 PLA2G12AQ9BZM1 189 aa10.22□□□□□ -0.77
RPAP1-204ENST00000562303 SLC35D1Q9NTN3 355 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms