RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 DEDD2Q8WXF8 326 aa6□□□□□ -1.45
SPG11-224ENST00000561268 UBE2FQ969M7 185 aa6□□□□□ -1.45
SPG11-224ENST00000561268 GTPBP3Q969Y2 492 aaKnown RBP6□□□□□ -1.45
SPG11-224ENST00000561268 MUCL1Q96DR8 90 aa6□□□□□ -1.45
SPG11-224ENST00000561268 ALKBH3Q96Q83 286 aaPredicted RBP6□□□□□ -1.45
SPG11-224ENST00000561268 KCNJ15Q99712 375 aa6□□□□□ -1.45
SPG11-224ENST00000561268 ARHGDIGQ99819 225 aa6□□□□□ -1.45
SPG11-224ENST00000561268 TMEM43Q9BTV4 400 aa6□□□□□ -1.45
SPG11-224ENST00000561268 FNDC11Q9BVV2 318 aa6□□□□□ -1.45
SPG11-224ENST00000561268 NIPAL2Q9H841 368 aa6□□□□□ -1.45
SPG11-224ENST00000561268 NEK6Q9HC98 313 aa6□□□□□ -1.45
SPG11-224ENST00000561268 PARPBPQ9NWS1 579 aa6□□□□□ -1.45
SPG11-224ENST00000561268 IL20Q9NYY1 176 aa6□□□□□ -1.45
SPG11-224ENST00000561268 LAMP3Q9UQV4 416 aa6□□□□□ -1.45
SPG11-224ENST00000561268 SF3B6Q9Y3B4 125 aaKnown RBP6□□□□□ -1.45
SPG11-224ENST00000561268 A0A087WUJ7 227 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 TRBV4-1A0A0J9YWV2 114 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 LOC100506127A0A0U1RQW1 187 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 CCDC182A6NF36 153 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 ELOA3DA6NLF2 546 aaPredicted RBP5.99□□□□□ -1.45
SPG11-224ENST00000561268 E7EQL1 145 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 LYPD3O95274 346 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 BGLAPP02818 100 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 GSTT2P0CG29 244 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 GSTT2BP0CG30 244 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 IL7P13232 177 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 AQP1P29972 269 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 RPS19P39019 145 aaKnown RBP5.99□□□□□ -1.45
SPG11-224ENST00000561268 OR1E2P47887 323 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 MTNR1AP48039 350 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 MTNR1BP49286 362 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 SELENOPP49908 381 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 BTG1P62324 171 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 TGFBR3Q03167 851 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 TNK1Q13470 666 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 TRAM2Q15035 370 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 CDK10Q15131 360 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 ZNF79Q15937 498 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 ELOA3BQ3SY89 546 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 TBRG1Q3YBR2 411 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 MZT2BQ6NZ67 158 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 LINC00114Q6XXX2 140 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 ZNF730Q6ZMV8 503 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 NANOGNBQ7Z5D8 188 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 ABHD12BQ7Z5M8 362 aaPredicted RBP5.99□□□□□ -1.45
SPG11-224ENST00000561268 LINC00528Q8N1L1 170 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 CADM2Q8N3J6 435 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 ELOA3Q8NG57 546 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 OR10H5Q8NGA6 315 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 OR52N5Q8NH56 324 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 TEX47Q8TBZ9 253 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 DNAJA4Q8WW22 397 aaPredicted RBP5.99□□□□□ -1.45
SPG11-224ENST00000561268 ACOT11Q8WXI4 607 aaPredicted RBP5.99□□□□□ -1.45
SPG11-224ENST00000561268 PHYHIPQ92561 330 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 UFD1Q92890 307 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 KTI12Q96EK9 354 aaPredicted RBP5.99□□□□□ -1.45
SPG11-224ENST00000561268 DNAJA3Q96EY1 480 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 TRMT61AQ96FX7 289 aaKnown RBP5.99□□□□□ -1.45
SPG11-224ENST00000561268 ZNF582Q96NG8 517 aaPredicted RBP5.99□□□□□ -1.45
SPG11-224ENST00000561268 OR5M11Q96RB7 305 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 IL4I1Q96RQ9 567 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 DHRS9Q9BPW9 319 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 WFDC6Q9BQY6 131 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 KATNB1Q9BVA0 655 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 TSSK6Q9BXA6 273 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 NDEL1Q9GZM8 345 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 BARX1Q9HBU1 254 aaPredicted RBP5.99□□□□□ -1.45
SPG11-224ENST00000561268 CBLN4Q9NTU7 201 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 RBFOX1Q9NWB1 397 aaKnown RBP5.99□□□□□ -1.45
SPG11-224ENST00000561268 TXNL4BQ9NX01 149 aaKnown RBP5.99□□□□□ -1.45
SPG11-224ENST00000561268 HAO2Q9NYQ3 351 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 CISD1Q9NZ45 108 aaKnown RBP5.99□□□□□ -1.45
SPG11-224ENST00000561268 TBC1D24Q9ULP9 559 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 ZNF232Q9UNY5 417 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 BAIAP2Q9UQB8 552 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 B3GALT5Q9Y2C3 310 aa5.99□□□□□ -1.45
SPG11-224ENST00000561268 TRAV36DV7A0A075B6V5 113 aa5.98□□□□□ -1.45
SPG11-224ENST00000561268 IGHV1-18A0A0C4DH31 117 aa5.98□□□□□ -1.45
SPG11-224ENST00000561268 CIB4A0PJX0 185 aa5.98□□□□□ -1.45
SPG11-224ENST00000561268 ZNF587BE7ETH6 402 aa5.98□□□□□ -1.45
SPG11-224ENST00000561268 H3BN98 237 aa5.98□□□□□ -1.45
SPG11-224ENST00000561268 J3QRE1 110 aa5.98□□□□□ -1.45
SPG11-224ENST00000561268 CHP2O43745 196 aa5.98□□□□□ -1.45
SPG11-224ENST00000561268 OR2T1O43869 369 aa5.98□□□□□ -1.45
SPG11-224ENST00000561268 NDUFS7O75251 213 aa5.98□□□□□ -1.45
SPG11-224ENST00000561268 SLC43A1O75387 559 aa5.98□□□□□ -1.45
SPG11-224ENST00000561268 IGF2P01344 180 aa5.98□□□□□ -1.45
SPG11-224ENST00000561268 OPN1SWP03999 348 aa5.98□□□□□ -1.45
SPG11-224ENST00000561268 THY1P04216 161 aa5.98□□□□□ -1.45
SPG11-224ENST00000561268 TSPAN19P0C672 248 aa5.98□□□□□ -1.45
SPG11-224ENST00000561268 HTR1FP30939 366 aa5.98□□□□□ -1.45
SPG11-224ENST00000561268 ACVR1BP36896 505 aa5.98□□□□□ -1.45
SPG11-224ENST00000561268 CDKN1AP38936 164 aa5.98□□□□□ -1.45
SPG11-224ENST00000561268 NUDT6P53370 316 aa5.98□□□□□ -1.45
SPG11-224ENST00000561268 RGS8P57771 180 aaPredicted RBP5.98□□□□□ -1.45
SPG11-224ENST00000561268 HOXC5Q00444 222 aa5.98□□□□□ -1.45
SPG11-224ENST00000561268 LGALS3BPQ08380 585 aa5.98□□□□□ -1.45
SPG11-224ENST00000561268 POU4F2Q12837 409 aa5.98□□□□□ -1.45
SPG11-224ENST00000561268 MFSD13AQ14CX5 517 aa5.98□□□□□ -1.45
SPG11-224ENST00000561268 SWI5Q1ZZU3 235 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms