RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 NPIPB13A6NJU9 1138 aa13.73□□□□□ -0.21
HERC1-207ENST00000560316 NPIPB4C9JG80 1138 aa13.73□□□□□ -0.21
HERC1-207ENST00000560316 SGCEO43556 437 aa13.73□□□□□ -0.21
HERC1-207ENST00000560316 PSMB10P40306 273 aa13.73□□□□□ -0.21
HERC1-207ENST00000560316 BLOC1S3Q6QNY0 202 aa13.73□□□□□ -0.21
HERC1-207ENST00000560316 C11orf65Q8NCR3 313 aa13.73□□□□□ -0.21
HERC1-207ENST00000560316 SPDL1Q96EA4 605 aa13.73□□□□□ -0.21
HERC1-207ENST00000560316 CPPED1Q9BRF8 314 aaPredicted RBP13.73□□□□□ -0.21
HERC1-207ENST00000560316 PCDHAC1Q9H158 963 aa13.73□□□□□ -0.21
HERC1-207ENST00000560316 DPAGT1Q9H3H5 408 aa13.73□□□□□ -0.21
HERC1-207ENST00000560316 MMADHCQ9H3L0 296 aaPredicted RBP13.73□□□□□ -0.21
HERC1-207ENST00000560316 CENPHQ9H3R5 247 aa13.73□□□□□ -0.21
HERC1-207ENST00000560316 CTSZQ9UBR2 303 aa13.73□□□□□ -0.21
HERC1-207ENST00000560316 TMCC3Q9ULS5 477 aa13.73□□□□□ -0.21
HERC1-207ENST00000560316 DNAH3Q8TD57 4116 aa13.72□□□□□ -0.21
HERC1-207ENST00000560316 TSPAN9O75954 239 aa13.72□□□□□ -0.21
HERC1-207ENST00000560316 VSIG8P0DPA2 414 aa13.72□□□□□ -0.21
HERC1-207ENST00000560316 WDR4P57081 412 aaKnown RBP13.72□□□□□ -0.21
HERC1-207ENST00000560316 RPL27P61353 136 aaKnown RBP13.72□□□□□ -0.21
HERC1-207ENST00000560316 ALG10Q5BKT4 473 aa13.72□□□□□ -0.21
HERC1-207ENST00000560316 METTL11BQ5VVY1 283 aa13.72□□□□□ -0.21
HERC1-207ENST00000560316 OTPQ5XKR4 325 aa13.72□□□□□ -0.21
HERC1-207ENST00000560316 IGFN1Q86VF2 1251 aa13.72□□□□□ -0.21
HERC1-207ENST00000560316 BHLHE23Q8NDY6 225 aa13.72□□□□□ -0.21
HERC1-207ENST00000560316 COG8Q96MW5 612 aa13.72□□□□□ -0.21
HERC1-207ENST00000560316 ZNF582Q96NG8 517 aaPredicted RBP13.72□□□□□ -0.21
HERC1-207ENST00000560316 SIRPDQ9H106 197 aa13.72□□□□□ -0.21
HERC1-207ENST00000560316 CCDC167Q9P0B6 97 aa13.72□□□□□ -0.21
HERC1-207ENST00000560316 NOTCH3Q9UM47 2321 aa13.72□□□□□ -0.21
HERC1-207ENST00000560316 H7C1C5 153 aa13.71□□□□□ -0.21
HERC1-207ENST00000560316 HLA-DPB1P04440 258 aa13.71□□□□□ -0.21
HERC1-207ENST00000560316 LIPFP07098 398 aa13.71□□□□□ -0.21
HERC1-207ENST00000560316 DBHP09172 617 aa13.71□□□□□ -0.21
HERC1-207ENST00000560316 IRF2P14316 349 aa13.71□□□□□ -0.21
HERC1-207ENST00000560316 NPY4RP50391 375 aa13.71□□□□□ -0.21
HERC1-207ENST00000560316 STX1BP61266 288 aa13.71□□□□□ -0.21
HERC1-207ENST00000560316 LCN6P62502 163 aa13.71□□□□□ -0.21
HERC1-207ENST00000560316 SCRN3Q0VDG4 424 aa13.71□□□□□ -0.21
HERC1-207ENST00000560316 DBPQ10586 325 aaPredicted RBP13.71□□□□□ -0.21
HERC1-207ENST00000560316 CYP51A1Q16850 503 aa13.71□□□□□ -0.21
HERC1-207ENST00000560316 OXLD1Q5BKU9 147 aa13.71□□□□□ -0.21
HERC1-207ENST00000560316 VAX1Q5SQQ9 334 aa13.71□□□□□ -0.21
HERC1-207ENST00000560316 CD276Q5ZPR3 534 aa13.71□□□□□ -0.21
HERC1-207ENST00000560316 FBXW12Q6X9E4 464 aa13.71□□□□□ -0.21
HERC1-207ENST00000560316 AENQ8WTP8 325 aaKnown RBP13.71□□□□□ -0.21
HERC1-207ENST00000560316 TMEM239Q8WW34 195 aa13.71□□□□□ -0.21
HERC1-207ENST00000560316 LIPHQ8WWY8 451 aa13.71□□□□□ -0.21
HERC1-207ENST00000560316 LRTOMTQ8WZ04 291 aa13.71□□□□□ -0.21
HERC1-207ENST00000560316 TAMM41Q96BW9 452 aa13.71□□□□□ -0.21
HERC1-207ENST00000560316 SEMA6AQ9H2E6 1030 aa13.71□□□□□ -0.21
HERC1-207ENST00000560316 ERVK-18Q9QC07 812 aa13.71□□□□□ -0.21
HERC1-207ENST00000560316 FUT4P22083 530 aa13.7□□□□□ -0.22
HERC1-207ENST00000560316 RBM34P42696 430 aaKnown RBP13.7□□□□□ -0.22
HERC1-207ENST00000560316 CTXN1P60606 82 aa13.7□□□□□ -0.22
HERC1-207ENST00000560316 ARF6P62330 175 aa13.7□□□□□ -0.22
HERC1-207ENST00000560316 COX10Q12887 443 aa13.7□□□□□ -0.22
HERC1-207ENST00000560316 SELPLGQ14242 412 aa13.7□□□□□ -0.22
HERC1-207ENST00000560316 HERPUD1Q15011 391 aa13.7□□□□□ -0.22
HERC1-207ENST00000560316 SFRP4Q6FHJ7 346 aaPredicted RBP13.7□□□□□ -0.22
HERC1-207ENST00000560316 DLEU7Q6UYE1 221 aa13.7□□□□□ -0.22
HERC1-207ENST00000560316 C11orf44Q8N8P7 122 aa13.7□□□□□ -0.22
HERC1-207ENST00000560316 PNLDC1Q8NA58 520 aaKnown RBP13.7□□□□□ -0.22
HERC1-207ENST00000560316 FNDC8Q8TC99 324 aa13.7□□□□□ -0.22
HERC1-207ENST00000560316 SLC26A7Q8TE54 656 aa13.7□□□□□ -0.22
HERC1-207ENST00000560316 RASSF4Q9H2L5 321 aa13.7□□□□□ -0.22
HERC1-207ENST00000560316 SMURF1Q9HCE7 757 aa13.7□□□□□ -0.22
HERC1-207ENST00000560316 UFSP2Q9NUQ7 469 aa13.7□□□□□ -0.22
HERC1-207ENST00000560316 HIF3AQ9Y2N7 669 aa13.7□□□□□ -0.22
HERC1-207ENST00000560316 FAM96BQ9Y3D0 163 aa13.7□□□□□ -0.22
HERC1-207ENST00000560316 FBP2O00757 339 aa13.69□□□□□ -0.22
HERC1-207ENST00000560316 GPR37O15354 613 aa13.69□□□□□ -0.22
HERC1-207ENST00000560316 SHOX2O60902 331 aaPredicted RBP13.69□□□□□ -0.22
HERC1-207ENST00000560316 FAM20BO75063 409 aa13.69□□□□□ -0.22
HERC1-207ENST00000560316 IGF2P01344 180 aa13.69□□□□□ -0.22
HERC1-207ENST00000560316 VIMP08670 466 aaKnown RBP13.69□□□□□ -0.22
HERC1-207ENST00000560316 TNFRSF1BP20333 461 aa13.69□□□□□ -0.22
HERC1-207ENST00000560316 FPR3P25089 353 aa13.69□□□□□ -0.22
HERC1-207ENST00000560316 GATA4P43694 442 aa13.69□□□□□ -0.22
HERC1-207ENST00000560316 MRPL19P49406 292 aaKnown RBP13.69□□□□□ -0.22
HERC1-207ENST00000560316 PRSS12P56730 875 aa13.69□□□□□ -0.22
HERC1-207ENST00000560316 TAS2R41P59536 307 aa13.69□□□□□ -0.22
HERC1-207ENST00000560316 MAB21L1Q13394 359 aa13.69□□□□□ -0.22
HERC1-207ENST00000560316 CLEC12AQ5QGZ9 265 aa13.69□□□□□ -0.22
HERC1-207ENST00000560316 PRAMEF6Q5VXH4 476 aa13.69□□□□□ -0.22
HERC1-207ENST00000560316 SLC35E4Q6ICL7 350 aa13.69□□□□□ -0.22
HERC1-207ENST00000560316 Q6ZTK2 550 aa13.69□□□□□ -0.22
HERC1-207ENST00000560316 PCYOX1LQ8NBM8 494 aa13.69□□□□□ -0.22
HERC1-207ENST00000560316 PPP1R14AQ96A00 147 aa13.69□□□□□ -0.22
HERC1-207ENST00000560316 RASD2Q96D21 266 aa13.69□□□□□ -0.22
HERC1-207ENST00000560316 TOR3AQ9H497 397 aa13.69□□□□□ -0.22
HERC1-207ENST00000560316 WDR76Q9H967 626 aa13.69□□□□□ -0.22
HERC1-207ENST00000560316 TMEM100Q9NV29 134 aa13.69□□□□□ -0.22
HERC1-207ENST00000560316 AURKAIP1Q9NWT8 199 aaPredicted RBP13.69□□□□□ -0.22
HERC1-207ENST00000560316 VPREB3Q9UKI3 123 aa13.69□□□□□ -0.22
HERC1-207ENST00000560316 SIGLEC9Q9Y336 463 aa13.69□□□□□ -0.22
HERC1-207ENST00000560316 MED31Q9Y3C7 131 aa13.69□□□□□ -0.22
HERC1-207ENST00000560316 ELOVL7A1L3X0 281 aa13.68□□□□□ -0.22
HERC1-207ENST00000560316 OR6C6A6NF89 314 aa13.68□□□□□ -0.22
HERC1-207ENST00000560316 IQCF6A8MYZ5 107 aa13.68□□□□□ -0.22
HERC1-207ENST00000560316 ADAM20O43506 726 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms