RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 FLOT2Q14254 428 aa9.91□□□□□ -0.82
RABGGTA-216ENST00000560243 SLC18B1Q6NT16 456 aa9.91□□□□□ -0.82
RABGGTA-216ENST00000560243 RPL13AP3Q6NVV1 102 aa9.91□□□□□ -0.82
RABGGTA-216ENST00000560243 USP51Q70EK9 711 aa9.91□□□□□ -0.82
RABGGTA-216ENST00000560243 SPATA24Q86W54 205 aa9.91□□□□□ -0.82
RABGGTA-216ENST00000560243 LNX2Q8N448 690 aa9.91□□□□□ -0.82
RABGGTA-216ENST00000560243 IQCF1Q8N6M8 205 aa9.91□□□□□ -0.82
RABGGTA-216ENST00000560243 SLC37A3Q8NCC5 494 aa9.91□□□□□ -0.82
RABGGTA-216ENST00000560243 GIPC3Q8TF64 312 aa9.91□□□□□ -0.82
RABGGTA-216ENST00000560243 SLCO4A1Q96BD0 722 aa9.91□□□□□ -0.82
RABGGTA-216ENST00000560243 CMBLQ96DG6 245 aa9.91□□□□□ -0.82
RABGGTA-216ENST00000560243 NKIRAS2Q9NYR9 191 aa9.91□□□□□ -0.82
RABGGTA-216ENST00000560243 TREM2Q9NZC2 230 aa9.91□□□□□ -0.82
RABGGTA-216ENST00000560243 KLHL21Q9UJP4 597 aa9.91□□□□□ -0.82
RABGGTA-216ENST00000560243 TCRBV3S1A0A5B6 114 aa9.9□□□□□ -0.82
RABGGTA-216ENST00000560243 H3BSA7 217 aa9.9□□□□□ -0.82
RABGGTA-216ENST00000560243 GSC2O15499 205 aa9.9□□□□□ -0.82
RABGGTA-216ENST00000560243 TPD52L2O43399 206 aaKnown RBP9.9□□□□□ -0.82
RABGGTA-216ENST00000560243 PPIHO43447 177 aaKnown RBP9.9□□□□□ -0.82
RABGGTA-216ENST00000560243 HLA-DQA2P01906 255 aa9.9□□□□□ -0.82
RABGGTA-216ENST00000560243 CLUP10909 449 aa9.9□□□□□ -0.82
RABGGTA-216ENST00000560243 PRKACGP22612 351 aa9.9□□□□□ -0.82
RABGGTA-216ENST00000560243 IGFBP5P24593 272 aa9.9□□□□□ -0.82
RABGGTA-216ENST00000560243 GPR6P46095 362 aaPredicted RBP9.9□□□□□ -0.82
RABGGTA-216ENST00000560243 CHN2P52757 468 aa9.9□□□□□ -0.82
RABGGTA-216ENST00000560243 MRPS11P82912 194 aaKnown RBP9.9□□□□□ -0.82
RABGGTA-216ENST00000560243 HLXQ14774 488 aaPredicted RBP9.9□□□□□ -0.82
RABGGTA-216ENST00000560243 MOGQ16653 247 aa9.9□□□□□ -0.82
RABGGTA-216ENST00000560243 PCGF3Q3KNV8 242 aa9.9□□□□□ -0.82
RABGGTA-216ENST00000560243 KRTAP27-1Q3LI81 207 aa9.9□□□□□ -0.82
RABGGTA-216ENST00000560243 SLC36A3Q495N2 470 aa9.9□□□□□ -0.82
RABGGTA-216ENST00000560243 ARL9Q6T311 187 aa9.9□□□□□ -0.82
RABGGTA-216ENST00000560243 UNQ6126/PRO20091Q6UXV3 157 aa9.9□□□□□ -0.82
RABGGTA-216ENST00000560243 Q6ZR03 302 aa9.9□□□□□ -0.82
RABGGTA-216ENST00000560243 IL17RELQ6ZVW7 336 aa9.9□□□□□ -0.82
RABGGTA-216ENST00000560243 PROKR2Q8NFJ6 384 aa9.9□□□□□ -0.82
RABGGTA-216ENST00000560243 GJC3Q8NFK1 279 aa9.9□□□□□ -0.82
RABGGTA-216ENST00000560243 OR10S1Q8NGN2 331 aa9.9□□□□□ -0.82
RABGGTA-216ENST00000560243 POP5Q969H6 163 aaKnown RBP9.9□□□□□ -0.82
RABGGTA-216ENST00000560243 MAP6Q96JE9 813 aa9.9□□□□□ -0.82
RABGGTA-216ENST00000560243 RBM4Q9BWF3 364 aaKnown RBP9.9□□□□□ -0.82
RABGGTA-216ENST00000560243 HDHD2Q9H0R4 259 aa9.9□□□□□ -0.82
RABGGTA-216ENST00000560243 PNRC2Q9NPJ4 139 aaKnown RBP9.9□□□□□ -0.82
RABGGTA-216ENST00000560243 PTTG3PQ9NZH4 202 aa9.9□□□□□ -0.82
RABGGTA-216ENST00000560243 PDP1Q9P0J1 537 aaPredicted RBP9.9□□□□□ -0.82
RABGGTA-216ENST00000560243 CYB5R1Q9UHQ9 305 aa9.9□□□□□ -0.82
RABGGTA-216ENST00000560243 PURGQ9UJV8 347 aaKnown RBP9.9□□□□□ -0.82
RABGGTA-216ENST00000560243 TANC2Q9HCD6 1990 aa9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 IGHV1-69-2A0A0G2JMI3 117 aa9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 PLSCR5A0PG75 271 aa9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 GNGT2O14610 69 aa9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 TIMM8AO60220 97 aaPredicted RBP9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 LMX1BO60663 402 aa9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 FKBP6O75344 327 aa9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 TGFAP01135 160 aa9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 MT-ND5P03915 603 aa9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 GSTM3P21266 225 aa9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 ANOS1P23352 680 aa9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 CRYBB2P43320 205 aa9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 PRSS12P56730 875 aa9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 TMEM33P57088 247 aa9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 MVKQ03426 396 aa9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 AVPI1Q5T686 147 aa9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 CD300LDQ6UXZ3 194 aa9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 NAA40Q86UY6 237 aa9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 C1orf174Q8IYL3 243 aa9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 ZNF511Q8NB15 262 aa9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 OR2T33Q8NG76 320 aa9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 OR2T4Q8NH00 348 aa9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 CLDND2Q8NHS1 167 aa9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 HAVCR1Q96D42 359 aa9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 PITX2Q99697 317 aa9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 COQ7Q99807 217 aa9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 HCAR1Q9BXC0 346 aa9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 NMNAT2Q9BZQ4 307 aa9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 MED20Q9H944 212 aa9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 WDR76Q9H967 626 aa9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 SAP30LQ9HAJ7 183 aa9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 DECR2Q9NUI1 292 aa9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 DCAF16Q9NXF7 216 aa9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 ATPIF1Q9UII2 106 aa9.89□□□□□ -0.83
RABGGTA-216ENST00000560243 DNHD1Q96M86 4753 aa9.88□□□□□ -0.83
RABGGTA-216ENST00000560243 DYSFO75923 2080 aa9.88□□□□□ -0.83
RABGGTA-216ENST00000560243 C5orf63A6NC05 138 aa9.88□□□□□ -0.83
RABGGTA-216ENST00000560243 ARRDC5A6NEK1 342 aa9.88□□□□□ -0.83
RABGGTA-216ENST00000560243 FAM183AA6NL82 134 aa9.88□□□□□ -0.83
RABGGTA-216ENST00000560243 FAM157AC9JC47 383 aa9.88□□□□□ -0.83
RABGGTA-216ENST00000560243 F5H5K5 113 aa9.88□□□□□ -0.83
RABGGTA-216ENST00000560243 ADH4P08319 380 aa9.88□□□□□ -0.83
RABGGTA-216ENST00000560243 ACSM4P0C7M7 580 aa9.88□□□□□ -0.83
RABGGTA-216ENST00000560243 SPI1P17947 270 aa9.88□□□□□ -0.83
RABGGTA-216ENST00000560243 KITLGP21583 273 aa9.88□□□□□ -0.83
RABGGTA-216ENST00000560243 LMO4P61968 165 aa9.88□□□□□ -0.83
RABGGTA-216ENST00000560243 CBX1P83916 185 aa9.88□□□□□ -0.83
RABGGTA-216ENST00000560243 CDK5R2Q13319 367 aa9.88□□□□□ -0.83
RABGGTA-216ENST00000560243 CHRFAM7AQ494W8 412 aa9.88□□□□□ -0.83
RABGGTA-216ENST00000560243 FAM209AQ5JX71 171 aa9.88□□□□□ -0.83
RABGGTA-216ENST00000560243 OR2T2Q6IF00 324 aa9.88□□□□□ -0.83
RABGGTA-216ENST00000560243 FAM166AQ6J272 317 aa9.88□□□□□ -0.83
RABGGTA-216ENST00000560243 ACSM5Q6NUN0 579 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms