RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 PMELP40967 661 aa10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 RPL18Q07020 188 aaKnown RBP10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 DBPQ10586 325 aaPredicted RBP10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 HERPUD1Q15011 391 aa10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 ARMC4Q5T2S8 1044 aa10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 REEP3Q6NUK4 255 aa10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 SLC25A47Q6Q0C1 308 aa10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 HIST3H2AQ7L7L0 130 aa10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 NANOGNBQ7Z5D8 188 aa10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 RANBP3LQ86VV4 465 aaPredicted RBP10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 TSPYL5Q86VY4 417 aaPredicted RBP10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 KRT73Q86Y46 540 aa10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 ATG16L2Q8NAA4 619 aa10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 NPEPL1Q8NDH3 523 aa10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 OR10AD1Q8NGE0 317 aa10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 OR10A6Q8NH74 314 aa10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 HDAC2Q92769 488 aaKnown RBP10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 HIST1H2ACQ93077 130 aa10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 HAVCR1Q96D42 359 aa10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 WDFY2Q96P53 400 aa10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 MCHR1Q99705 422 aa10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 SMURF2Q9HAU4 748 aa10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 TBCCD1Q9NVR7 557 aa10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 CMTM6Q9NX76 183 aa10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 STARD10Q9Y365 291 aa10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 TIMM10BQ9Y5J6 103 aa10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 STAB2Q8WWQ8 2551 aa10.58□□□□□ -0.72
RABGGTA-213ENST00000560127 IGHV3-64DA0A0J9YX35 117 aa10.58□□□□□ -0.72
RABGGTA-213ENST00000560127 M0R3H8 397 aa10.58□□□□□ -0.72
RABGGTA-213ENST00000560127 FMO6PO60774 539 aa10.58□□□□□ -0.72
RABGGTA-213ENST00000560127 OPN1SWP03999 348 aa10.58□□□□□ -0.72
RABGGTA-213ENST00000560127 CST2P09228 141 aa10.58□□□□□ -0.72
RABGGTA-213ENST00000560127 UMPSP11172 480 aa10.58□□□□□ -0.72
RABGGTA-213ENST00000560127 CD247P20963 164 aa10.58□□□□□ -0.72
RABGGTA-213ENST00000560127 TUBG1P23258 451 aa10.58□□□□□ -0.72
RABGGTA-213ENST00000560127 PSMB10P40306 273 aa10.58□□□□□ -0.72
RABGGTA-213ENST00000560127 NPTX1Q15818 432 aa10.58□□□□□ -0.72
RABGGTA-213ENST00000560127 ZNF181Q2M3W8 571 aa10.58□□□□□ -0.72
RABGGTA-213ENST00000560127 TTC33Q6PID6 262 aaPredicted RBP10.58□□□□□ -0.72
RABGGTA-213ENST00000560127 ARL9Q6T311 187 aa10.58□□□□□ -0.72
RABGGTA-213ENST00000560127 DCDC5Q6ZRR9 648 aa10.58□□□□□ -0.72
RABGGTA-213ENST00000560127 Q6ZTK2 550 aa10.58□□□□□ -0.72
RABGGTA-213ENST00000560127 MOGAT3Q86VF5 341 aa10.58□□□□□ -0.72
RABGGTA-213ENST00000560127 OR5AS1Q8N127 324 aa10.58□□□□□ -0.72
RABGGTA-213ENST00000560127 PIP4P2Q8N4L2 257 aa10.58□□□□□ -0.72
RABGGTA-213ENST00000560127 OR8J3Q8NGG0 315 aa10.58□□□□□ -0.72
RABGGTA-213ENST00000560127 OR4D11Q8NGI4 311 aa10.58□□□□□ -0.72
RABGGTA-213ENST00000560127 LRTOMTQ8WZ04 291 aa10.58□□□□□ -0.72
RABGGTA-213ENST00000560127 SGCDQ92629 289 aa10.58□□□□□ -0.72
RABGGTA-213ENST00000560127 LHX4Q969G2 390 aa10.58□□□□□ -0.72
RABGGTA-213ENST00000560127 TAMM41Q96BW9 452 aa10.58□□□□□ -0.72
RABGGTA-213ENST00000560127 ZNF583Q96ND8 569 aa10.58□□□□□ -0.72
RABGGTA-213ENST00000560127 SIRPDQ9H106 197 aa10.58□□□□□ -0.72
RABGGTA-213ENST00000560127 DPAGT1Q9H3H5 408 aa10.58□□□□□ -0.72
RABGGTA-213ENST00000560127 TUBG2Q9NRH3 451 aa10.58□□□□□ -0.72
RABGGTA-213ENST00000560127 SLC13A4Q9UKG4 626 aa10.58□□□□□ -0.72
RABGGTA-213ENST00000560127 CORO2BQ9UQ03 480 aa10.58□□□□□ -0.72
RABGGTA-213ENST00000560127 PRORSD1PA6NEY8 169 aa10.57□□□□□ -0.72
RABGGTA-213ENST00000560127 CPSF4LA6NMK7 179 aaKnown RBP10.57□□□□□ -0.72
RABGGTA-213ENST00000560127 EVPLLA8MZ36 301 aa10.57□□□□□ -0.72
RABGGTA-213ENST00000560127 NME4O00746 187 aa10.57□□□□□ -0.72
RABGGTA-213ENST00000560127 SHOX2O60902 331 aaPredicted RBP10.57□□□□□ -0.72
RABGGTA-213ENST00000560127 DAP3P51398 398 aaKnown RBP10.57□□□□□ -0.72
RABGGTA-213ENST00000560127 COX10Q12887 443 aa10.57□□□□□ -0.72
RABGGTA-213ENST00000560127 CYLC2Q14093 348 aaPredicted RBP10.57□□□□□ -0.72
RABGGTA-213ENST00000560127 MAPRE2Q15555 327 aa10.57□□□□□ -0.72
RABGGTA-213ENST00000560127 CYP51A1Q16850 503 aa10.57□□□□□ -0.72
RABGGTA-213ENST00000560127 ENTPD8Q5MY95 495 aa10.57□□□□□ -0.72
RABGGTA-213ENST00000560127 SLC35E4Q6ICL7 350 aa10.57□□□□□ -0.72
RABGGTA-213ENST00000560127 HDDC2Q7Z4H3 204 aa10.57□□□□□ -0.72
RABGGTA-213ENST00000560127 C11orf44Q8N8P7 122 aa10.57□□□□□ -0.72
RABGGTA-213ENST00000560127 SCCPDHQ8NBX0 429 aa10.57□□□□□ -0.72
RABGGTA-213ENST00000560127 C11orf65Q8NCR3 313 aa10.57□□□□□ -0.72
RABGGTA-213ENST00000560127 C19orf18Q8NEA5 215 aa10.57□□□□□ -0.72
RABGGTA-213ENST00000560127 OR6T1Q8NGN1 323 aa10.57□□□□□ -0.72
RABGGTA-213ENST00000560127 RP9Q8TA86 221 aaKnown RBP10.57□□□□□ -0.72
RABGGTA-213ENST00000560127 ITPKCQ96DU7 683 aa10.57□□□□□ -0.72
RABGGTA-213ENST00000560127 ZNF426Q9BUY5 554 aa10.57□□□□□ -0.72
RABGGTA-213ENST00000560127 TOR3AQ9H497 397 aa10.57□□□□□ -0.72
RABGGTA-213ENST00000560127 EVA1AQ9H8M9 152 aa10.57□□□□□ -0.72
RABGGTA-213ENST00000560127 MEPEQ9NQ76 525 aaPredicted RBP10.57□□□□□ -0.72
RABGGTA-213ENST00000560127 CTSZQ9UBR2 303 aa10.57□□□□□ -0.72
RABGGTA-213ENST00000560127 VPREB3Q9UKI3 123 aa10.57□□□□□ -0.72
RABGGTA-213ENST00000560127 NDRG4Q9ULP0 352 aaKnown RBP10.57□□□□□ -0.72
RABGGTA-213ENST00000560127 F5H5P2 479 aa10.56□□□□□ -0.72
RABGGTA-213ENST00000560127 MLNRO43193 412 aa10.56□□□□□ -0.72
RABGGTA-213ENST00000560127 CCDC22O60826 627 aa10.56□□□□□ -0.72
RABGGTA-213ENST00000560127 LIPFP07098 398 aa10.56□□□□□ -0.72
RABGGTA-213ENST00000560127 TGFBR2P37173 567 aa10.56□□□□□ -0.72
RABGGTA-213ENST00000560127 AQP2P41181 271 aa10.56□□□□□ -0.72
RABGGTA-213ENST00000560127 SRP9P49458 86 aaKnown RBP10.56□□□□□ -0.72
RABGGTA-213ENST00000560127 PCBD1P61457 104 aa10.56□□□□□ -0.72
RABGGTA-213ENST00000560127 CD47Q08722 323 aa10.56□□□□□ -0.72
RABGGTA-213ENST00000560127 ENDOGQ14249 297 aaKnown RBP10.56□□□□□ -0.72
RABGGTA-213ENST00000560127 DUSP7Q16829 419 aa10.56□□□□□ -0.72
RABGGTA-213ENST00000560127 VMACQ2NL98 169 aa10.56□□□□□ -0.72
RABGGTA-213ENST00000560127 METTL11BQ5VVY1 283 aa10.56□□□□□ -0.72
RABGGTA-213ENST00000560127 FOXL2NBQ6ZUU3 175 aa10.56□□□□□ -0.72
RABGGTA-213ENST00000560127 VASH1Q7L8A9 365 aaPredicted RBP10.56□□□□□ -0.72
RABGGTA-213ENST00000560127 RBM45Q8IUH3 476 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms