RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 NKIRAS2Q9NYR9 191 aa12.87□□□□□ -0.35
RABGGTA-212ENST00000559974 LOC400499M0QZD8 3231 aa12.87□□□□□ -0.35
RABGGTA-212ENST00000559974 SDK2Q58EX2 2172 aa12.86□□□□□ -0.35
RABGGTA-212ENST00000559974 TMEM272A0A1B0GTI8 110 aa12.86□□□□□ -0.35
RABGGTA-212ENST00000559974 CIB4A0PJX0 185 aa12.86□□□□□ -0.35
RABGGTA-212ENST00000559974 MEGF11A6BM72 1044 aa12.86□□□□□ -0.35
RABGGTA-212ENST00000559974 AQP7P3A6NL99 342 aa12.86□□□□□ -0.35
RABGGTA-212ENST00000559974 DOK2O60496 412 aa12.86□□□□□ -0.35
RABGGTA-212ENST00000559974 ANXA3P12429 323 aa12.86□□□□□ -0.35
RABGGTA-212ENST00000559974 HTR2CP28335 458 aa12.86□□□□□ -0.35
RABGGTA-212ENST00000559974 SSR4P51571 173 aa12.86□□□□□ -0.35
RABGGTA-212ENST00000559974 TOMM20Q15388 145 aa12.86□□□□□ -0.35
RABGGTA-212ENST00000559974 KLHL24Q6TFL4 600 aa12.86□□□□□ -0.35
RABGGTA-212ENST00000559974 RAB11FIP2Q7L804 512 aa12.86□□□□□ -0.35
RABGGTA-212ENST00000559974 GTPBP8Q8N3Z3 284 aaPredicted RBP12.86□□□□□ -0.35
RABGGTA-212ENST00000559974 DEDD2Q8WXF8 326 aa12.86□□□□□ -0.35
RABGGTA-212ENST00000559974 DACT3Q96B18 629 aaPredicted RBP12.86□□□□□ -0.35
RABGGTA-212ENST00000559974 FAM122AQ96E09 287 aa12.86□□□□□ -0.35
RABGGTA-212ENST00000559974 HYLS1Q96M11 299 aa12.86□□□□□ -0.35
RABGGTA-212ENST00000559974 ANGPTL4Q9BY76 406 aa12.86□□□□□ -0.35
RABGGTA-212ENST00000559974 KCNK15Q9H427 330 aa12.86□□□□□ -0.35
RABGGTA-212ENST00000559974 FAM206AQ9NX38 181 aa12.86□□□□□ -0.35
RABGGTA-212ENST00000559974 ZNF222Q9UK12 451 aa12.86□□□□□ -0.35
RABGGTA-212ENST00000559974 LOC101059948A0A1B0GTJ6 334 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 H7C417 338 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 SULT2B1O00204 365 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 P2RY10O00398 339 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 FABP7O15540 132 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 PRAF2O60831 178 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 RBBP9O75884 186 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 ZNF43P17038 809 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 FOLR3P41439 243 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 EIF1AXP47813 144 aaKnown RBP12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 SLC35A1P78382 337 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 BIVMQ86UB2 503 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 BEST4Q8NFU0 473 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 OR6M1Q8NGM8 313 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 OR10S1Q8NGN2 331 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 GON7Q9BXV9 100 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 CDCP1Q9H5V8 836 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 MTFP1Q9UDX5 166 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 FLVCR2Q9UPI3 526 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 NSG1A0A0A6YYJ2 146 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 LOC102725191A0A1B0GVB3 256 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 RAMP1O60894 148 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 KDM4BO94953 1096 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 ALDOBP05062 364 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 ACSM4P0C7M7 580 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 CCL3P10147 92 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 CXCL3P19876 107 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 GLYATL3Q5SZD4 288 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 SLC25A47Q6Q0C1 308 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 TMPPEQ6ZT21 453 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 OR51A2Q8NGJ7 313 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 NKX3-1Q99801 234 aaPredicted RBP12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 OR10A4Q9H209 315 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 SEC61A2Q9H9S3 476 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 BEX1Q9HBH7 125 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 ZNF160Q9HCG1 818 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 TAS2R8Q9NYW2 309 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 FOXJ2Q9P0K8 574 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 ING4Q9UNL4 249 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 LHFPL6Q9Y693 200 aa12.85□□□□□ -0.35
RABGGTA-212ENST00000559974 TRAV18A0A075B6X5 111 aa12.84□□□□□ -0.35
RABGGTA-212ENST00000559974 A0A1B0GUH1 482 aa12.84□□□□□ -0.35
RABGGTA-212ENST00000559974 B4E171 279 aa12.84□□□□□ -0.35
RABGGTA-212ENST00000559974 SSNA1O43805 119 aa12.84□□□□□ -0.35
RABGGTA-212ENST00000559974 TGM6O95932 706 aa12.84□□□□□ -0.35
RABGGTA-212ENST00000559974 TTRP02766 147 aa12.84□□□□□ -0.35
RABGGTA-212ENST00000559974 CSF1P09603 554 aa12.84□□□□□ -0.35
RABGGTA-212ENST00000559974 SULT1A3P0DMM9 295 aa12.84□□□□□ -0.35
RABGGTA-212ENST00000559974 SULT1A4P0DMN0 295 aa12.84□□□□□ -0.35
RABGGTA-212ENST00000559974 FAUP35544 74 aaKnown RBP12.84□□□□□ -0.35
RABGGTA-212ENST00000559974 TSPAN7P41732 249 aa12.84□□□□□ -0.35
RABGGTA-212ENST00000559974 VEGFCP49767 419 aa12.84□□□□□ -0.35
RABGGTA-212ENST00000559974 SPOCK1Q08629 439 aa12.84□□□□□ -0.35
RABGGTA-212ENST00000559974 HIST3H3Q16695 136 aa12.84□□□□□ -0.35
RABGGTA-212ENST00000559974 PCGF3Q3KNV8 242 aa12.84□□□□□ -0.35
RABGGTA-212ENST00000559974 LINC00303Q3SY05 128 aa12.84□□□□□ -0.35
RABGGTA-212ENST00000559974 CARD17Q5XLA6 110 aa12.84□□□□□ -0.35
RABGGTA-212ENST00000559974 FAAP20Q6NZ36 180 aa12.84□□□□□ -0.35
RABGGTA-212ENST00000559974 CFAP77Q6ZQR2 320 aa12.84□□□□□ -0.35
RABGGTA-212ENST00000559974 RPS19BP1Q86WX3 136 aaKnown RBP12.84□□□□□ -0.35
RABGGTA-212ENST00000559974 ELMOD2Q8IZ81 293 aa12.84□□□□□ -0.35
RABGGTA-212ENST00000559974 NKAIN3Q8N8D7 197 aa12.84□□□□□ -0.35
RABGGTA-212ENST00000559974 PAQR8Q8TEZ7 354 aa12.84□□□□□ -0.35
RABGGTA-212ENST00000559974 LIN37Q96GY3 246 aaPredicted RBP12.84□□□□□ -0.35
RABGGTA-212ENST00000559974 ATG5Q9H1Y0 275 aa12.84□□□□□ -0.35
RABGGTA-212ENST00000559974 PROK2Q9HC23 129 aa12.84□□□□□ -0.35
RABGGTA-212ENST00000559974 SH2D2AQ9NP31 389 aa12.84□□□□□ -0.35
RABGGTA-212ENST00000559974 CGGBP1Q9UFW8 167 aaPredicted RBP12.84□□□□□ -0.35
RABGGTA-212ENST00000559974 GDF2Q9UK05 429 aaPredicted RBP12.84□□□□□ -0.35
RABGGTA-212ENST00000559974 POLR1DQ9Y2S0 133 aa12.84□□□□□ -0.35
RABGGTA-212ENST00000559974 NCOA6Q14686 2063 aaPredicted RBP12.84□□□□□ -0.35
RABGGTA-212ENST00000559974 LOC390937A0A1W2PQ73 354 aa12.83□□□□□ -0.35
RABGGTA-212ENST00000559974 ZNF726A6NNF4 738 aa12.83□□□□□ -0.35
RABGGTA-212ENST00000559974 C9orf172C9J069 976 aa12.83□□□□□ -0.35
RABGGTA-212ENST00000559974 ARPC1BO15143 372 aaKnown RBP12.83□□□□□ -0.35
RABGGTA-212ENST00000559974 LMX1BO60663 402 aa12.83□□□□□ -0.35
RABGGTA-212ENST00000559974 PMS2P2O95744 297 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms