RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 TPTEP56180 551 aa15.76■□□□□ 0.11
SNX1-208ENST00000559844 HIST3H3Q16695 136 aa15.76■□□□□ 0.11
SNX1-208ENST00000559844 DTX3Q8N9I9 347 aa15.76■□□□□ 0.11
SNX1-208ENST00000559844 OR51A4Q8NGJ6 313 aa15.76■□□□□ 0.11
SNX1-208ENST00000559844 CYB5R1Q9UHQ9 305 aa15.76■□□□□ 0.11
SNX1-208ENST00000559844 OR52A1Q9UKL2 312 aa15.76■□□□□ 0.11
SNX1-208ENST00000559844 ATRXP46100 2492 aa15.76■□□□□ 0.11
SNX1-208ENST00000559844 TRAV8-7A0A075B6U6 113 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 KLRC4-KLRK1H3BQV0 150 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 EEF1E1O43324 174 aaKnown RBP15.75■□□□□ 0.11
SNX1-208ENST00000559844 GSTZ1O43708 216 aaPredicted RBP15.75■□□□□ 0.11
SNX1-208ENST00000559844 MAS1P04201 325 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 EIF2B2P49770 351 aaKnown RBP15.75■□□□□ 0.11
SNX1-208ENST00000559844 LY6DQ14210 128 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 KCNMB1Q16558 191 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 TMEM244Q5VVB8 128 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 KLHL24Q6TFL4 600 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 CMTM4Q8IZR5 234 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 UBE2J2Q8N2K1 259 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 OR2M7Q8NG81 312 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 OR2AJ1Q8NGZ0 328 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 SLAMF6Q96DU3 332 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 FAM173AQ9BQD7 235 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 ABCG5Q9H222 651 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 CENPMQ9NSP4 180 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 CKLFQ9UBR5 152 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 HHLA2Q9UM44 414 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 EMC9Q9Y3B6 208 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 MRPS18CQ9Y3D5 142 aaKnown RBP15.75■□□□□ 0.11
SNX1-208ENST00000559844 TMEM269A0A1B0GVZ9 245 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 MEIOCA2RUB1 952 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 PINLYPA6NC86 204 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 TFECO14948 347 aaPredicted RBP15.75■□□□□ 0.11
SNX1-208ENST00000559844 RAMP1O60894 148 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 UBCP0CG48 685 aaKnown RBP15.75■□□□□ 0.11
SNX1-208ENST00000559844 MMP16P51512 607 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 CLDN17P56750 224 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 CD300CQ08708 224 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 TOMM20Q15388 145 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 CARTPTQ16568 116 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 CARD17Q5XLA6 110 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 LRFN4Q6PJG9 635 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 RHOUQ7L0Q8 258 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 FCRLAQ7L513 359 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 C15orf40Q8WUR7 153 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 S100A16Q96FQ6 103 aaKnown RBP15.75■□□□□ 0.11
SNX1-208ENST00000559844 SEC61A2Q9H9S3 476 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 G6PC2Q9NQR9 355 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 LUZP4Q9P127 313 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 OR5V1Q9UGF6 321 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 STEAP1Q9UHE8 339 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 FBXL3Q9UKT7 428 aa15.75■□□□□ 0.11
SNX1-208ENST00000559844 NPIPA2E9PIF3 369 aa15.74■□□□□ 0.11
SNX1-208ENST00000559844 NPIPA3F8WFD2 350 aa15.74■□□□□ 0.11
SNX1-208ENST00000559844 SULT1B1O43704 296 aa15.74■□□□□ 0.11
SNX1-208ENST00000559844 TRAPPC2P0DI81 140 aa15.74■□□□□ 0.11
SNX1-208ENST00000559844 TRAPPC2BP0DI82 140 aa15.74■□□□□ 0.11
SNX1-208ENST00000559844 SFTPCP11686 197 aa15.74■□□□□ 0.11
SNX1-208ENST00000559844 FSTP19883 344 aa15.74■□□□□ 0.11
SNX1-208ENST00000559844 RFC3P40938 356 aa15.74■□□□□ 0.11
SNX1-208ENST00000559844 MEOX1P50221 254 aa15.74■□□□□ 0.11
SNX1-208ENST00000559844 ART1P52961 327 aa15.74■□□□□ 0.11
SNX1-208ENST00000559844 BCL2L15Q5TBC7 163 aa15.74■□□□□ 0.11
SNX1-208ENST00000559844 RSBN1Q5VWQ0 802 aaPredicted RBP15.74■□□□□ 0.11
SNX1-208ENST00000559844 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.74■□□□□ 0.11
SNX1-208ENST00000559844 ASB5Q8WWX0 329 aa15.74■□□□□ 0.11
SNX1-208ENST00000559844 MRPS7Q9Y2R9 242 aaKnown RBP15.74■□□□□ 0.11
SNX1-208ENST00000559844 POLR1DQ9Y2S0 133 aa15.74■□□□□ 0.11
SNX1-208ENST00000559844 CENPXA8MT69 81 aa15.73■□□□□ 0.11
SNX1-208ENST00000559844 TPPPO94811 219 aa15.73■□□□□ 0.11
SNX1-208ENST00000559844 QDPRP09417 244 aa15.73■□□□□ 0.11
SNX1-208ENST00000559844 FAM157BP0CG42 384 aa15.73■□□□□ 0.11
SNX1-208ENST00000559844 AGFG1P52594 562 aaKnown RBP15.73■□□□□ 0.11
SNX1-208ENST00000559844 PLEKHN1Q494U1 663 aaPredicted RBP15.73■□□□□ 0.11
SNX1-208ENST00000559844 CORO6Q6QEF8 472 aa15.73■□□□□ 0.11
SNX1-208ENST00000559844 PCSK4Q6UW60 755 aa15.73■□□□□ 0.11
SNX1-208ENST00000559844 CREB3L2Q70SY1 520 aa15.73■□□□□ 0.11
SNX1-208ENST00000559844 OR14L1PQ8NHC6 308 aa15.73■□□□□ 0.11
SNX1-208ENST00000559844 SLC39A7Q92504 469 aa15.73■□□□□ 0.11
SNX1-208ENST00000559844 PPP1R14AQ96A00 147 aa15.73■□□□□ 0.11
SNX1-208ENST00000559844 SLC25A38Q96DW6 304 aa15.73■□□□□ 0.11
SNX1-208ENST00000559844 ZFP3Q96NJ6 502 aa15.73■□□□□ 0.11
SNX1-208ENST00000559844 NIPAL2Q9H841 368 aa15.73■□□□□ 0.11
SNX1-208ENST00000559844 GDF2Q9UK05 429 aaPredicted RBP15.73■□□□□ 0.11
SNX1-208ENST00000559844 BOKQ9UMX3 212 aaPredicted RBP15.73■□□□□ 0.11
SNX1-208ENST00000559844 CACNG2Q9Y698 323 aa15.73■□□□□ 0.11
SNX1-208ENST00000559844 LANCL1O43813 399 aa15.73■□□□□ 0.11
SNX1-208ENST00000559844 CLDN12P56749 244 aa15.73■□□□□ 0.11
SNX1-208ENST00000559844 CLDN20P56880 219 aa15.73■□□□□ 0.11
SNX1-208ENST00000559844 B3GALT5-AS1P59052 145 aa15.73■□□□□ 0.11
SNX1-208ENST00000559844 GPR176Q14439 515 aa15.73■□□□□ 0.11
SNX1-208ENST00000559844 TOMM5Q8N4H5 51 aa15.73■□□□□ 0.11
SNX1-208ENST00000559844 SYNPRQ8TBG9 265 aa15.73■□□□□ 0.11
SNX1-208ENST00000559844 YIPF5Q969M3 257 aa15.73■□□□□ 0.11
SNX1-208ENST00000559844 PNPLA2Q96AD5 504 aa15.73■□□□□ 0.11
SNX1-208ENST00000559844 INTS12Q96CB8 462 aaKnown RBP15.73■□□□□ 0.11
SNX1-208ENST00000559844 C7orf50Q9BRJ6 194 aaKnown RBP15.73■□□□□ 0.11
SNX1-208ENST00000559844 SF3B5Q9BWJ5 86 aaKnown RBP15.73■□□□□ 0.11
SNX1-208ENST00000559844 GLTPQ9NZD2 209 aa15.73■□□□□ 0.11
SNX1-208ENST00000559844 LHX6Q9UPM6 363 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms