RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 DBTP11182 482 aaKnown RBP18.69■□□□□ 0.58
SNX1-206ENST00000559389 HSPA13P48723 471 aa18.69■□□□□ 0.58
SNX1-206ENST00000559389 NUDT6P53370 316 aa18.69■□□□□ 0.58
SNX1-206ENST00000559389 RSPO1Q2MKA7 263 aaPredicted RBP18.69■□□□□ 0.58
SNX1-206ENST00000559389 VHLLQ6RSH7 139 aa18.69■□□□□ 0.58
SNX1-206ENST00000559389 RHOUQ7L0Q8 258 aa18.69■□□□□ 0.58
SNX1-206ENST00000559389 RFLNBQ8N5W9 214 aa18.69■□□□□ 0.58
SNX1-206ENST00000559389 CNIH3Q8TBE1 160 aa18.69■□□□□ 0.58
SNX1-206ENST00000559389 THEM6Q8WUY1 208 aa18.69■□□□□ 0.58
SNX1-206ENST00000559389 TMEM171Q8WVE6 324 aa18.69■□□□□ 0.58
SNX1-206ENST00000559389 C4orf45Q96LM5 186 aa18.69■□□□□ 0.58
SNX1-206ENST00000559389 COPS4Q9BT78 406 aa18.69■□□□□ 0.58
SNX1-206ENST00000559389 CENPMQ9NSP4 180 aa18.69■□□□□ 0.58
SNX1-206ENST00000559389 EIF3KQ9UBQ5 218 aaKnown RBP18.69■□□□□ 0.58
SNX1-206ENST00000559389 TMEM14AQ9Y6G1 99 aa18.69■□□□□ 0.58
SNX1-206ENST00000559389 ACSM4P0C7M7 580 aa18.68■□□□□ 0.58
SNX1-206ENST00000559389 THBS4P35443 961 aa18.68■□□□□ 0.58
SNX1-206ENST00000559389 GLRXP35754 106 aa18.68■□□□□ 0.58
SNX1-206ENST00000559389 OPRL1P41146 370 aa18.68■□□□□ 0.58
SNX1-206ENST00000559389 HCCSP53701 268 aa18.68■□□□□ 0.58
SNX1-206ENST00000559389 UCP2P55851 309 aa18.68■□□□□ 0.58
SNX1-206ENST00000559389 RPS23P62266 143 aaKnown RBP18.68■□□□□ 0.58
SNX1-206ENST00000559389 ADIPOQQ15848 244 aa18.68■□□□□ 0.58
SNX1-206ENST00000559389 MSMPQ1L6U9 139 aa18.68■□□□□ 0.58
SNX1-206ENST00000559389 ARL9Q6T311 187 aa18.68■□□□□ 0.58
SNX1-206ENST00000559389 SPATC1Q76KD6 591 aa18.68■□□□□ 0.58
SNX1-206ENST00000559389 FBLIM1Q8WUP2 373 aa18.68■□□□□ 0.58
SNX1-206ENST00000559389 RNFT2Q96EX2 444 aa18.68■□□□□ 0.58
SNX1-206ENST00000559389 BCL2L14Q9BZR8 327 aa18.68■□□□□ 0.58
SNX1-206ENST00000559389 OR51B6Q9H340 312 aa18.68■□□□□ 0.58
SNX1-206ENST00000559389 LIME1Q9H400 295 aa18.68■□□□□ 0.58
SNX1-206ENST00000559389 TBCCD1Q9NVR7 557 aa18.68■□□□□ 0.58
SNX1-206ENST00000559389 HEATR1Q9H583 2144 aaKnown RBP18.67■□□□□ 0.58
SNX1-206ENST00000559389 HRNRQ86YZ3 2850 aaPredicted RBP18.67■□□□□ 0.58
SNX1-206ENST00000559389 PRR32B1ATL7 298 aa18.67■□□□□ 0.58
SNX1-206ENST00000559389 J3QW42 95 aa18.67■□□□□ 0.58
SNX1-206ENST00000559389 M0R135 149 aa18.67■□□□□ 0.58
SNX1-206ENST00000559389 DANCRP0C864 163 aa18.67■□□□□ 0.58
SNX1-206ENST00000559389 RAD52P43351 418 aa18.67■□□□□ 0.58
SNX1-206ENST00000559389 ERVS71-1P61550 626 aa18.67■□□□□ 0.58
SNX1-206ENST00000559389 GRB2P62993 217 aaKnown RBP18.67■□□□□ 0.58
SNX1-206ENST00000559389 UNQ6126/PRO20091Q6UXV3 157 aa18.67■□□□□ 0.58
SNX1-206ENST00000559389 DTX2Q86UW9 622 aa18.67■□□□□ 0.58
SNX1-206ENST00000559389 ABHD4Q8TB40 342 aa18.67■□□□□ 0.58
SNX1-206ENST00000559389 IGFBPL1Q8WX77 278 aa18.67■□□□□ 0.58
SNX1-206ENST00000559389 ASB17Q8WXJ9 295 aa18.67■□□□□ 0.58
SNX1-206ENST00000559389 SPTSSAQ969W0 71 aa18.67■□□□□ 0.58
SNX1-206ENST00000559389 ZNF799Q96GE5 643 aa18.67■□□□□ 0.58
SNX1-206ENST00000559389 KCNJ15Q99712 375 aa18.67■□□□□ 0.58
SNX1-206ENST00000559389 ELOVL3Q9HB03 270 aa18.67■□□□□ 0.58
SNX1-206ENST00000559389 FAIMQ9NVQ4 179 aa18.67■□□□□ 0.58
SNX1-206ENST00000559389 ZNF670-ZNF695F2Z2N8 137 aa18.66■□□□□ 0.58
SNX1-206ENST00000559389 F5H5K5 113 aa18.66■□□□□ 0.58
SNX1-206ENST00000559389 PHYHO14832 338 aa18.66■□□□□ 0.58
SNX1-206ENST00000559389 NGFP01138 241 aa18.66■□□□□ 0.58
SNX1-206ENST00000559389 OR2T7P0C7T2 308 aa18.66■□□□□ 0.58
SNX1-206ENST00000559389 APOBEC3AP31941 199 aaPredicted RBP18.66■□□□□ 0.58
SNX1-206ENST00000559389 TTKP33981 857 aa18.66■□□□□ 0.58
SNX1-206ENST00000559389 SLC15A1P46059 708 aa18.66■□□□□ 0.58
SNX1-206ENST00000559389 RGS6P49758 472 aa18.66■□□□□ 0.58
SNX1-206ENST00000559389 FABP6P51161 128 aa18.66■□□□□ 0.58
SNX1-206ENST00000559389 SMN1Q16637 294 aaKnown RBP18.66■□□□□ 0.58
SNX1-206ENST00000559389 COLCA1Q6ZS62 124 aa18.66■□□□□ 0.58
SNX1-206ENST00000559389 OR1J1Q8NGS3 322 aa18.66■□□□□ 0.58
SNX1-206ENST00000559389 OR2T27Q8NH04 317 aa18.66■□□□□ 0.58
SNX1-206ENST00000559389 ANKRD60Q9BZ19 345 aa18.66■□□□□ 0.58
SNX1-206ENST00000559389 TTTY10Q9BZA0 68 aa18.66■□□□□ 0.58
SNX1-206ENST00000559389 GRIP1Q9Y3R0 1128 aa18.66■□□□□ 0.58
SNX1-206ENST00000559389 J3QRE1 110 aa18.65■□□□□ 0.58
SNX1-206ENST00000559389 RAF1P04049 648 aa18.65■□□□□ 0.58
SNX1-206ENST00000559389 SOD3P08294 240 aa18.65■□□□□ 0.58
SNX1-206ENST00000559389 H2BFMP0C1H6 154 aa18.65■□□□□ 0.58
SNX1-206ENST00000559389 OR4A8P0C604 315 aa18.65■□□□□ 0.58
SNX1-206ENST00000559389 ATP6V1E1P36543 226 aa18.65■□□□□ 0.58
SNX1-206ENST00000559389 TPTEP56180 551 aa18.65■□□□□ 0.58
SNX1-206ENST00000559389 CXCR4P61073 352 aa18.65■□□□□ 0.58
SNX1-206ENST00000559389 PPP1CBP62140 327 aa18.65■□□□□ 0.58
SNX1-206ENST00000559389 ACTC1P68032 377 aa18.65■□□□□ 0.58
SNX1-206ENST00000559389 ACTA1P68133 377 aa18.65■□□□□ 0.58
SNX1-206ENST00000559389 ROM1Q03395 351 aa18.65■□□□□ 0.58
SNX1-206ENST00000559389 TAF13Q15543 124 aa18.65■□□□□ 0.58
SNX1-206ENST00000559389 RGS7BPQ6MZT1 257 aaPredicted RBP18.65■□□□□ 0.58
SNX1-206ENST00000559389 KCTD18Q6PI47 426 aaPredicted RBP18.65■□□□□ 0.58
SNX1-206ENST00000559389 DRAM2Q6UX65 266 aa18.65■□□□□ 0.58
SNX1-206ENST00000559389 LRRN1Q6UXK5 716 aa18.65■□□□□ 0.58
SNX1-206ENST00000559389 THAP5Q7Z6K1 395 aa18.65■□□□□ 0.58
SNX1-206ENST00000559389 C1orf174Q8IYL3 243 aa18.65■□□□□ 0.58
SNX1-206ENST00000559389 FBXL14Q8N1E6 418 aa18.65■□□□□ 0.58
SNX1-206ENST00000559389 MUC15Q8N387 334 aa18.65■□□□□ 0.58
SNX1-206ENST00000559389 OR10H4Q8NGA5 316 aa18.65■□□□□ 0.58
SNX1-206ENST00000559389 MRPL24Q96A35 216 aaKnown RBP18.65■□□□□ 0.58
SNX1-206ENST00000559389 APOBEC3DQ96AK3 386 aaPredicted RBP18.65■□□□□ 0.58
SNX1-206ENST00000559389 LGALS12Q96DT0 336 aa18.65■□□□□ 0.58
SNX1-206ENST00000559389 OR8B4Q96RC9 309 aa18.65■□□□□ 0.58
SNX1-206ENST00000559389 AMBNQ9NP70 447 aa18.65■□□□□ 0.58
SNX1-206ENST00000559389 ST6GALNAC2Q9UJ37 374 aa18.65■□□□□ 0.58
SNX1-206ENST00000559389 EXOGQ9Y2C4 368 aaKnown RBP18.65■□□□□ 0.58
SNX1-206ENST00000559389 RPL36Q9Y3U8 105 aaKnown RBP18.65■□□□□ 0.58
SNX1-206ENST00000559389 CMAHPQ9Y471 501 aa18.65■□□□□ 0.58
SNX1-206ENST00000559389 ATE1O95260 518 aa18.64■□□□□ 0.57
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