RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 PRG3Q9Y2Y8 225 aaPredicted RBP2.87□□□□□ -1.95
CASC4-206ENST00000558847 LTBP1Q14766 1721 aa2.87□□□□□ -1.95
CASC4-206ENST00000558847 GAKO14976 1311 aa2.87□□□□□ -1.95
CASC4-206ENST00000558847 MN1Q10571 1320 aaPredicted RBP2.87□□□□□ -1.95
CASC4-206ENST00000558847 UBN2Q6ZU65 1347 aa2.87□□□□□ -1.95
CASC4-206ENST00000558847 IGLV3-16A0A075B6K0 115 aa2.86□□□□□ -1.95
CASC4-206ENST00000558847 TRAV6A0A075B6T7 132 aa2.86□□□□□ -1.95
CASC4-206ENST00000558847 TEX46H3BTG2 121 aa2.86□□□□□ -1.95
CASC4-206ENST00000558847 FARS2O95363 451 aaKnown RBP2.86□□□□□ -1.95
CASC4-206ENST00000558847 BCHEP06276 602 aa2.86□□□□□ -1.95
CASC4-206ENST00000558847 DCNP07585 359 aaKnown RBP2.86□□□□□ -1.95
CASC4-206ENST00000558847 IGHV1-8P0DP01 117 aa2.86□□□□□ -1.95
CASC4-206ENST00000558847 IL32P24001 234 aa2.86□□□□□ -1.95
CASC4-206ENST00000558847 RFC3P40938 356 aa2.86□□□□□ -1.95
CASC4-206ENST00000558847 GPR1P46091 355 aa2.86□□□□□ -1.95
CASC4-206ENST00000558847 PRR3P79522 188 aaKnown RBP2.86□□□□□ -1.95
CASC4-206ENST00000558847 KDSRQ06136 332 aa2.86□□□□□ -1.95
CASC4-206ENST00000558847 CAPRIN1Q14444 709 aaKnown RBP2.86□□□□□ -1.95
CASC4-206ENST00000558847 HIKESHIQ53FT3 197 aa2.86□□□□□ -1.95
CASC4-206ENST00000558847 ORMDL2Q53FV1 153 aa2.86□□□□□ -1.95
CASC4-206ENST00000558847 METTL21CQ5VZV1 264 aa2.86□□□□□ -1.95
CASC4-206ENST00000558847 HORMAD1Q86X24 394 aa2.86□□□□□ -1.95
CASC4-206ENST00000558847 ZNF547Q8IVP9 402 aa2.86□□□□□ -1.95
CASC4-206ENST00000558847 ENTHD1Q8IYW4 607 aa2.86□□□□□ -1.95
CASC4-206ENST00000558847 VKORC1L1Q8N0U8 176 aa2.86□□□□□ -1.95
CASC4-206ENST00000558847 SNX31Q8N9S9 440 aa2.86□□□□□ -1.95
CASC4-206ENST00000558847 OR5T3Q8NGG3 340 aa2.86□□□□□ -1.95
CASC4-206ENST00000558847 OR56A4Q8NGH8 313 aa2.86□□□□□ -1.95
CASC4-206ENST00000558847 ITFG1Q8TB96 612 aa2.86□□□□□ -1.95
CASC4-206ENST00000558847 NAT6Q93015 286 aa2.86□□□□□ -1.95
CASC4-206ENST00000558847 CERS2Q96G23 380 aa2.86□□□□□ -1.95
CASC4-206ENST00000558847 BTN2A3PQ96KV6 586 aa2.86□□□□□ -1.95
CASC4-206ENST00000558847 ZNF681Q96N22 645 aa2.86□□□□□ -1.95
CASC4-206ENST00000558847 CAMK2N2Q96S95 79 aa2.86□□□□□ -1.95
CASC4-206ENST00000558847 CHAC1Q9BUX1 264 aa2.86□□□□□ -1.95
CASC4-206ENST00000558847 SAV1Q9H4B6 383 aaPredicted RBP2.86□□□□□ -1.95
CASC4-206ENST00000558847 MED4Q9NPJ6 270 aa2.86□□□□□ -1.95
CASC4-206ENST00000558847 AGPAT4Q9NRZ5 378 aa2.86□□□□□ -1.95
CASC4-206ENST00000558847 SLC39A1Q9NY26 324 aa2.86□□□□□ -1.95
CASC4-206ENST00000558847 TBX21Q9UL17 535 aa2.86□□□□□ -1.95
CASC4-206ENST00000558847 HYOU1Q9Y4L1 999 aa2.86□□□□□ -1.95
CASC4-206ENST00000558847 SCN2AQ99250 2005 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 A0A1W2PP18 115 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 SYCE1LA8MT33 242 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 PDZK1P1A8MUH7 402 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 K7EMT4 169 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 ZNF701M0R085 212 aaPredicted RBP2.85□□□□□ -1.95
CASC4-206ENST00000558847 SLC9A3R1O14745 358 aaPredicted RBP2.85□□□□□ -1.95
CASC4-206ENST00000558847 SEMA3DO95025 777 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 OTCP00480 354 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 KRT16P08779 473 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 CD3GP09693 182 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 GZMAP12544 262 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 RAB5AP20339 215 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 DTYMKP23919 212 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 SYNJ2BPP57105 145 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 YWHAEP62258 255 aaKnown RBP2.85□□□□□ -1.95
CASC4-206ENST00000558847 RAP1AP62834 184 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 IRF8Q02556 426 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 TFDP2Q14188 446 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 PON2Q15165 354 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 RGNQ15493 299 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 CAVIN4Q5BKX8 364 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 TCEAL5Q5H9L2 206 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 AVPI1Q5T686 147 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 ADNP2Q6IQ32 1131 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 WDR82Q6UXN9 313 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 FBXW12Q6X9E4 464 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 SAXO1Q8IYX7 474 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 CMTM8Q8IZV2 173 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 NPWQ8N729 165 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 TCEAL3Q969E4 200 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 NRBF2Q96F24 287 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 FOXC2Q99958 501 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 DEFB129Q9H1M3 183 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 C8orf33Q9H7E9 229 aaPredicted RBP2.85□□□□□ -1.95
CASC4-206ENST00000558847 UBE2ZQ9H832 354 aaPredicted RBP2.85□□□□□ -1.95
CASC4-206ENST00000558847 CD209Q9NNX6 404 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 DYRK4Q9NR20 520 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 DDX19AQ9NUU7 478 aaKnown RBP2.85□□□□□ -1.95
CASC4-206ENST00000558847 ZNF223Q9UK11 482 aaPredicted RBP2.85□□□□□ -1.95
CASC4-206ENST00000558847 YARS2Q9Y2Z4 477 aaKnown RBP2.85□□□□□ -1.95
CASC4-206ENST00000558847 PHLPP2Q6ZVD8 1323 aa2.85□□□□□ -1.95
CASC4-206ENST00000558847 IGLV1-36A0A0B4J1U3 117 aa2.84□□□□□ -1.95
CASC4-206ENST00000558847 IGHV5-10-1A0A0J9YXX1 117 aa2.84□□□□□ -1.95
CASC4-206ENST00000558847 A0A0J9YYE9 177 aa2.84□□□□□ -1.95
CASC4-206ENST00000558847 NCBP2LA6PVI3 153 aaKnown RBP2.84□□□□□ -1.95
CASC4-206ENST00000558847 SERPINE3A8MV23 424 aa2.84□□□□□ -1.95
CASC4-206ENST00000558847 C11orf94C9JXX5 98 aa2.84□□□□□ -1.95
CASC4-206ENST00000558847 MED6O75586 246 aa2.84□□□□□ -1.95
CASC4-206ENST00000558847 RP2O75695 350 aa2.84□□□□□ -1.95
CASC4-206ENST00000558847 SNAI1O95863 264 aaPredicted RBP2.84□□□□□ -1.95
CASC4-206ENST00000558847 TRBC1P01850 177 aa2.84□□□□□ -1.95
CASC4-206ENST00000558847 EIF4EP06730 217 aaKnown RBP2.84□□□□□ -1.95
CASC4-206ENST00000558847 TACSTD2P09758 323 aa2.84□□□□□ -1.95
CASC4-206ENST00000558847 PSMC3P17980 439 aa2.84□□□□□ -1.95
CASC4-206ENST00000558847 TCN2P20062 427 aa2.84□□□□□ -1.95
CASC4-206ENST00000558847 MYL9P24844 172 aa2.84□□□□□ -1.95
CASC4-206ENST00000558847 PFN2P35080 140 aa2.84□□□□□ -1.95
CASC4-206ENST00000558847 SSTR5P35346 364 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms