RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 ADAT3Q96EY9 351 aaPredicted RBP9.43□□□□□ -0.9
CUX1-217ENST00000558836 CHIAQ9BZP6 476 aa9.43□□□□□ -0.9
CUX1-217ENST00000558836 PBOV1Q9GZY1 135 aa9.43□□□□□ -0.9
CUX1-217ENST00000558836 ZNF700Q9H0M5 742 aa9.43□□□□□ -0.9
CUX1-217ENST00000558836 C1orf198Q9H425 327 aa9.43□□□□□ -0.9
CUX1-217ENST00000558836 NOX3Q9HBY0 568 aa9.43□□□□□ -0.9
CUX1-217ENST00000558836 ZNF319Q9P2F9 582 aa9.43□□□□□ -0.9
CUX1-217ENST00000558836 ETV7Q9Y603 341 aa9.43□□□□□ -0.9
CUX1-217ENST00000558836 ZNF407Q9C0G0 2248 aa9.43□□□□□ -0.9
CUX1-217ENST00000558836 ANKRD20A5PA0PJZ0 165 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 OR2M5A3KFT3 312 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 C7orf66A4D0T2 115 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 C5orf63A6NC05 138 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 ZIC3O60481 467 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 B3GALNT1O75752 331 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 AQP8O94778 261 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 C1QBP02746 253 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 ABOP16442 354 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 PCK2Q16822 640 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 THEM4Q5T1C6 240 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 TMPPEQ6ZT21 453 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 OR52N4Q8NGI2 321 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 OR52B4Q8NGK2 314 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 OR6S1Q8NH40 331 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 OR56B4Q8NH76 319 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 DEDD2Q8WXF8 326 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 SLC25A28Q96A46 364 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 CMBLQ96DG6 245 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 WDR89Q96FK6 387 aaPredicted RBP9.42□□□□□ -0.9
CUX1-217ENST00000558836 FAM206AQ9NX38 181 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 LOC100289279A0A1B0GTE1 492 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 A0A1W2PNV4 684 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 CIB4A0PJX0 185 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 HSPB2A8KAH6 182 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 TNFSF11O14788 317 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 SYT7O43581 403 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 RBBP9O75884 186 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 HSD11B1P28845 292 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 ERP29P30040 261 aaKnown RBP9.42□□□□□ -0.9
CUX1-217ENST00000558836 MPLP40238 635 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 UBE2MP61081 183 aaKnown RBP9.42□□□□□ -0.9
CUX1-217ENST00000558836 TAF13Q15543 124 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 HSPB2Q16082 182 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 BCL2A1Q16548 175 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 GLT8D1Q68CQ7 371 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 KLHL24Q6TFL4 600 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.42□□□□□ -0.9
CUX1-217ENST00000558836 RTN4RL2Q86UN3 420 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 OR13C9Q8NGT0 318 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 ZNF837Q96EG3 531 aaPredicted RBP9.42□□□□□ -0.9
CUX1-217ENST00000558836 DIABLOQ9NR28 239 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 DKKL1Q9UK85 242 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 PADI1Q9ULC6 663 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 LOXL2Q9Y4K0 774 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 DSPP15924 2871 aaKnown RBP9.42□□□□□ -0.9
CUX1-217ENST00000558836 PCNX2A6NKB5 2137 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 LNP1A1A4G5 178 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 RGS13O14921 159 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 RFPL3SP0C7P2 107 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 IGFBP3P17936 291 aaPredicted RBP9.42□□□□□ -0.9
CUX1-217ENST00000558836 STARP49675 285 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 SELENOPP49908 381 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 DLX5P56178 289 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 EXT1Q16394 746 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 DCAF12Q5T6F0 453 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 PLXDC2Q6UX71 529 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 UXS1Q8NBZ7 420 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 ACBD4Q8NC06 268 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 OR2AJ1Q8NGZ0 328 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 OXGR1Q96P68 337 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 CNTD2Q9H8S5 307 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 PLEKHA1Q9HB21 404 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 COPZ2Q9P299 210 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 PRELID1Q9Y255 219 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 NCKAP5O14513 1909 aa9.42□□□□□ -0.9
CUX1-217ENST00000558836 E9PLN8 166 aa9.41□□□□□ -0.9
CUX1-217ENST00000558836 ECDO95905 644 aaPredicted RBP9.41□□□□□ -0.9
CUX1-217ENST00000558836 CD3DP04234 171 aa9.41□□□□□ -0.9
CUX1-217ENST00000558836 GTF2F2P13984 249 aa9.41□□□□□ -0.9
CUX1-217ENST00000558836 LIFP15018 202 aa9.41□□□□□ -0.9
CUX1-217ENST00000558836 RFC3P40938 356 aa9.41□□□□□ -0.9
CUX1-217ENST00000558836 EIF1P41567 113 aaKnown RBP9.41□□□□□ -0.9
CUX1-217ENST00000558836 ZP1P60852 638 aa9.41□□□□□ -0.9
CUX1-217ENST00000558836 TIGD3Q6B0B8 471 aa9.41□□□□□ -0.9
CUX1-217ENST00000558836 FAM166AQ6J272 317 aa9.41□□□□□ -0.9
CUX1-217ENST00000558836 ABHD12BQ7Z5M8 362 aaPredicted RBP9.41□□□□□ -0.9
CUX1-217ENST00000558836 OR4C16Q8NGL9 310 aa9.41□□□□□ -0.9
CUX1-217ENST00000558836 OR1J2Q8NGS2 313 aa9.41□□□□□ -0.9
CUX1-217ENST00000558836 OR6N1Q8NGY5 312 aa9.41□□□□□ -0.9
CUX1-217ENST00000558836 ZFAND1Q8TCF1 268 aa9.41□□□□□ -0.9
CUX1-217ENST00000558836 FAM71F1Q96KD3 344 aaPredicted RBP9.41□□□□□ -0.9
CUX1-217ENST00000558836 AKAP7Q9P0M2 348 aaPredicted RBP9.41□□□□□ -0.9
CUX1-217ENST00000558836 TCFL5Q9UL49 500 aa9.41□□□□□ -0.9
CUX1-217ENST00000558836 MGAT4AQ9UM21 535 aa9.41□□□□□ -0.9
CUX1-217ENST00000558836 FREM1Q5H8C1 2179 aa9.41□□□□□ -0.9
CUX1-217ENST00000558836 AQP7P3A6NL99 342 aa9.41□□□□□ -0.9
CUX1-217ENST00000558836 PYCARD-AS1I3L0S3 204 aa9.41□□□□□ -0.9
CUX1-217ENST00000558836 SULT1B1O43704 296 aa9.41□□□□□ -0.9
CUX1-217ENST00000558836 HRGP04196 525 aa9.41□□□□□ -0.9
CUX1-217ENST00000558836 RLN1P04808 185 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms