RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 ISG15P05161 165 aa11.42□□□□□ -0.58
SMAD3-207ENST00000558763 ZNF708P17019 499 aa11.42□□□□□ -0.58
SMAD3-207ENST00000558763 DCTDP32321 178 aa11.42□□□□□ -0.58
SMAD3-207ENST00000558763 ENDOGQ14249 297 aaKnown RBP11.42□□□□□ -0.58
SMAD3-207ENST00000558763 C11orf91Q3C1V1 193 aa11.42□□□□□ -0.58
SMAD3-207ENST00000558763 Q6ZS92 163 aa11.42□□□□□ -0.58
SMAD3-207ENST00000558763 GDPD3Q7L5L3 318 aa11.42□□□□□ -0.58
SMAD3-207ENST00000558763 OR8H2Q8N162 312 aa11.42□□□□□ -0.58
SMAD3-207ENST00000558763 OR4M1Q8NGD0 313 aa11.42□□□□□ -0.58
SMAD3-207ENST00000558763 ASB5Q8WWX0 329 aa11.42□□□□□ -0.58
SMAD3-207ENST00000558763 KCNJ15Q99712 375 aa11.42□□□□□ -0.58
SMAD3-207ENST00000558763 ZNF416Q9BWM5 594 aa11.42□□□□□ -0.58
SMAD3-207ENST00000558763 ABRACLQ9P1F3 81 aa11.42□□□□□ -0.58
SMAD3-207ENST00000558763 B4GALT7Q9UBV7 327 aa11.42□□□□□ -0.58
SMAD3-207ENST00000558763 OR52A1Q9UKL2 312 aa11.42□□□□□ -0.58
SMAD3-207ENST00000558763 RCE1Q9Y256 329 aa11.42□□□□□ -0.58
SMAD3-207ENST00000558763 TLN1Q9Y490 2541 aaKnown RBP11.42□□□□□ -0.58
SMAD3-207ENST00000558763 ARPC4-TTLL3A0A0A6YYG9 625 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 RER1O15258 196 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 CYTIPO60759 359 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 TMCC2O75069 709 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 CFPP27918 469 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 RFX2P48378 723 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 RHOUQ7L0Q8 258 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 LGALS14Q8TCE9 139 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 ZNF775Q96BV0 537 aaPredicted RBP11.41□□□□□ -0.58
SMAD3-207ENST00000558763 CENPMQ9NSP4 180 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 DDX28Q9NUL7 540 aaKnown RBP11.41□□□□□ -0.58
SMAD3-207ENST00000558763 EXTL2Q9UBQ6 330 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 A0A0G2JMP0 313 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 A0A0X1KG70 313 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 TMEM269A0A1B0GVZ9 245 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 LOC107986453A0A1B0GWG9 222 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 FUOMA2VDF0 154 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 DHHO43323 396 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 DOK2O60496 412 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 TTRP02766 147 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 H2BFMP0C1H6 154 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 NR2C1P13056 603 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 LSM6P62312 80 aaKnown RBP11.41□□□□□ -0.58
SMAD3-207ENST00000558763 PPIAP62937 165 aaKnown RBP11.41□□□□□ -0.58
SMAD3-207ENST00000558763 RNFT1Q5M7Z0 435 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 HES5Q5TA89 166 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 LINGO2Q7L985 606 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 DNAAF1Q8NEP3 725 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 OR4M2Q8NGB6 313 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 OR6N1Q8NGY5 312 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 SETD6Q8TBK2 473 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 ABHD3Q8WU67 409 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 CPNE4Q96A23 557 aaPredicted RBP11.41□□□□□ -0.58
SMAD3-207ENST00000558763 SLC25A38Q96DW6 304 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 NELFAQ9H3P2 528 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 ADAM30Q9UKF2 790 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 SPATA2Q9UM82 520 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 GTF2A1LQ9UNN4 478 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 LHX6Q9UPM6 363 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 LIPGQ9Y5X9 500 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 V9GY05 133 aa11.41□□□□□ -0.58
SMAD3-207ENST00000558763 A0A1B0GVC2 190 aa11.4□□□□□ -0.58
SMAD3-207ENST00000558763 A6NIN4 97 aa11.4□□□□□ -0.58
SMAD3-207ENST00000558763 ZNF878C9JN71 531 aa11.4□□□□□ -0.58
SMAD3-207ENST00000558763 ACOT7O00154 380 aa11.4□□□□□ -0.58
SMAD3-207ENST00000558763 PDCD5O14737 125 aa11.4□□□□□ -0.58
SMAD3-207ENST00000558763 APOA1P02647 267 aa11.4□□□□□ -0.58
SMAD3-207ENST00000558763 ACSM4P0C7M7 580 aa11.4□□□□□ -0.58
SMAD3-207ENST00000558763 ZNF24P17028 368 aa11.4□□□□□ -0.58
SMAD3-207ENST00000558763 IGFBP3P17936 291 aaPredicted RBP11.4□□□□□ -0.58
SMAD3-207ENST00000558763 MSR1P21757 451 aa11.4□□□□□ -0.58
SMAD3-207ENST00000558763 ACHEP22303 614 aa11.4□□□□□ -0.58
SMAD3-207ENST00000558763 PSMA6P60900 246 aaKnown RBP11.4□□□□□ -0.58
SMAD3-207ENST00000558763 HIST1H3AP68431 136 aa11.4□□□□□ -0.58
SMAD3-207ENST00000558763 ST3GAL2Q16842 350 aa11.4□□□□□ -0.58
SMAD3-207ENST00000558763 PLEKHN1Q494U1 663 aaPredicted RBP11.4□□□□□ -0.58
SMAD3-207ENST00000558763 PYDC2Q56P42 97 aa11.4□□□□□ -0.58
SMAD3-207ENST00000558763 HIST2H3PS2Q5TEC6 136 aa11.4□□□□□ -0.58
SMAD3-207ENST00000558763 HIST2H3AQ71DI3 136 aa11.4□□□□□ -0.58
SMAD3-207ENST00000558763 FCRLAQ7L513 359 aa11.4□□□□□ -0.58
SMAD3-207ENST00000558763 ZNF433Q8N7K0 673 aaPredicted RBP11.4□□□□□ -0.58
SMAD3-207ENST00000558763 ABTB1Q969K4 478 aaPredicted RBP11.4□□□□□ -0.58
SMAD3-207ENST00000558763 INTS12Q96CB8 462 aaKnown RBP11.4□□□□□ -0.58
SMAD3-207ENST00000558763 BRD7Q9NPI1 651 aa11.4□□□□□ -0.58
SMAD3-207ENST00000558763 TUBD1Q9UJT1 453 aa11.4□□□□□ -0.58
SMAD3-207ENST00000558763 IGKV3D-15A0A087WSY6 115 aa11.39□□□□□ -0.59
SMAD3-207ENST00000558763 FAM25AB3EWG3 89 aa11.39□□□□□ -0.59
SMAD3-207ENST00000558763 FAM25CB3EWG5 89 aa11.39□□□□□ -0.59
SMAD3-207ENST00000558763 FAM25GB3EWG6 89 aa11.39□□□□□ -0.59
SMAD3-207ENST00000558763 PLA2G10O15496 165 aa11.39□□□□□ -0.59
SMAD3-207ENST00000558763 LMX1BO60663 402 aa11.39□□□□□ -0.59
SMAD3-207ENST00000558763 TMEM127O75204 238 aa11.39□□□□□ -0.59
SMAD3-207ENST00000558763 CD37P11049 281 aa11.39□□□□□ -0.59
SMAD3-207ENST00000558763 FSTP19883 344 aa11.39□□□□□ -0.59
SMAD3-207ENST00000558763 BCAP31P51572 246 aa11.39□□□□□ -0.59
SMAD3-207ENST00000558763 CLDN12P56749 244 aa11.39□□□□□ -0.59
SMAD3-207ENST00000558763 ASAH1Q13510 395 aa11.39□□□□□ -0.59
SMAD3-207ENST00000558763 IL18Q14116 193 aa11.39□□□□□ -0.59
SMAD3-207ENST00000558763 PLXDC2Q6UX71 529 aa11.39□□□□□ -0.59
SMAD3-207ENST00000558763 PRSS45Q7RTY3 260 aa11.39□□□□□ -0.59
SMAD3-207ENST00000558763 ELMOD2Q8IZ81 293 aa11.39□□□□□ -0.59
SMAD3-207ENST00000558763 Q8N402 240 aa11.39□□□□□ -0.59
SMAD3-207ENST00000558763 TSEN15Q8WW01 171 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms