RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 ARID1AO14497 2285 aa13.6□□□□□ -0.23
RABGGTA-206ENST00000558649 F5H5K5 113 aa13.59□□□□□ -0.23
RABGGTA-206ENST00000558649 EI24O14681 340 aa13.59□□□□□ -0.23
RABGGTA-206ENST00000558649 GLCEO94923 617 aa13.59□□□□□ -0.23
RABGGTA-206ENST00000558649 BAG2O95816 211 aa13.59□□□□□ -0.23
RABGGTA-206ENST00000558649 ZNF250P15622 560 aa13.59□□□□□ -0.23
RABGGTA-206ENST00000558649 GSTT1P30711 240 aa13.59□□□□□ -0.23
RABGGTA-206ENST00000558649 EVX1P49640 407 aa13.59□□□□□ -0.23
RABGGTA-206ENST00000558649 BLVRAP53004 296 aa13.59□□□□□ -0.23
RABGGTA-206ENST00000558649 PPP2R2BQ00005 443 aa13.59□□□□□ -0.23
RABGGTA-206ENST00000558649 TNK1Q13470 666 aa13.59□□□□□ -0.23
RABGGTA-206ENST00000558649 LINC01590Q5TEZ4 76 aa13.59□□□□□ -0.23
RABGGTA-206ENST00000558649 CLEC2AQ6UVW9 174 aa13.59□□□□□ -0.23
RABGGTA-206ENST00000558649 CIARTQ8N365 385 aaPredicted RBP13.59□□□□□ -0.23
RABGGTA-206ENST00000558649 KLF14Q8TD94 323 aaPredicted RBP13.59□□□□□ -0.23
RABGGTA-206ENST00000558649 SNX33Q8WV41 574 aa13.59□□□□□ -0.23
RABGGTA-206ENST00000558649 MARS2Q96GW9 593 aaKnown RBP13.59□□□□□ -0.23
RABGGTA-206ENST00000558649 INTS14Q96SY0 518 aa13.59□□□□□ -0.23
RABGGTA-206ENST00000558649 TMUB1Q9BVT8 246 aa13.59□□□□□ -0.23
RABGGTA-206ENST00000558649 OSBPL10Q9BXB5 764 aa13.59□□□□□ -0.23
RABGGTA-206ENST00000558649 PRRG3Q9BZD7 231 aa13.59□□□□□ -0.23
RABGGTA-206ENST00000558649 ATPIF1Q9UII2 106 aa13.59□□□□□ -0.23
RABGGTA-206ENST00000558649 FBXO9Q9UK97 447 aaPredicted RBP13.59□□□□□ -0.23
RABGGTA-206ENST00000558649 ORC6Q9Y5N6 252 aa13.59□□□□□ -0.23
RABGGTA-206ENST00000558649 CELSR1Q9NYQ6 3014 aa13.59□□□□□ -0.23
RABGGTA-206ENST00000558649 ZAR1LA6NP61 321 aa13.58□□□□□ -0.24
RABGGTA-206ENST00000558649 PRKYO43930 277 aa13.58□□□□□ -0.24
RABGGTA-206ENST00000558649 SELENOFO60613 162 aa13.58□□□□□ -0.24
RABGGTA-206ENST00000558649 F12P00748 615 aaPredicted RBP13.58□□□□□ -0.24
RABGGTA-206ENST00000558649 NAA10P41227 235 aaPredicted RBP13.58□□□□□ -0.24
RABGGTA-206ENST00000558649 GABPB1Q06547 395 aaPredicted RBP13.58□□□□□ -0.24
RABGGTA-206ENST00000558649 APOFQ13790 326 aa13.58□□□□□ -0.24
RABGGTA-206ENST00000558649 EIF2B1Q14232 305 aaKnown RBP13.58□□□□□ -0.24
RABGGTA-206ENST00000558649 TAF13Q15543 124 aa13.58□□□□□ -0.24
RABGGTA-206ENST00000558649 DPY19L4Q7Z388 723 aa13.58□□□□□ -0.24
RABGGTA-206ENST00000558649 OR10S1Q8NGN2 331 aa13.58□□□□□ -0.24
RABGGTA-206ENST00000558649 GTF3AQ92664 365 aaKnown RBP13.58□□□□□ -0.24
RABGGTA-206ENST00000558649 COPS4Q9BT78 406 aa13.58□□□□□ -0.24
RABGGTA-206ENST00000558649 PNRC2Q9NPJ4 139 aaKnown RBP13.58□□□□□ -0.24
RABGGTA-206ENST00000558649 CENPMQ9NSP4 180 aa13.58□□□□□ -0.24
RABGGTA-206ENST00000558649 SLCO1C1Q9NYB5 712 aa13.58□□□□□ -0.24
RABGGTA-206ENST00000558649 PTTG3PQ9NZH4 202 aa13.58□□□□□ -0.24
RABGGTA-206ENST00000558649 STARD10Q9Y365 291 aa13.58□□□□□ -0.24
RABGGTA-206ENST00000558649 ITPR3Q14573 2671 aa13.57□□□□□ -0.24
RABGGTA-206ENST00000558649 IGLV3-9A0A075B6K5 115 aa13.57□□□□□ -0.24
RABGGTA-206ENST00000558649 RNF223E7ERA6 249 aa13.57□□□□□ -0.24
RABGGTA-206ENST00000558649 PRODHO43272 600 aa13.57□□□□□ -0.24
RABGGTA-206ENST00000558649 ICMTO60725 284 aa13.57□□□□□ -0.24
RABGGTA-206ENST00000558649 POLR2IP36954 125 aaKnown RBP13.57□□□□□ -0.24
RABGGTA-206ENST00000558649 SLC6A9P48067 706 aa13.57□□□□□ -0.24
RABGGTA-206ENST00000558649 ECH1Q13011 328 aa13.57□□□□□ -0.24
RABGGTA-206ENST00000558649 TMEM255AQ5JRV8 349 aa13.57□□□□□ -0.24
RABGGTA-206ENST00000558649 SLX4IPQ5VYV7 408 aa13.57□□□□□ -0.24
RABGGTA-206ENST00000558649 MBNL2Q5VZF2 373 aaKnown RBP13.57□□□□□ -0.24
RABGGTA-206ENST00000558649 BCDIN3DQ7Z5W3 292 aaKnown RBP13.57□□□□□ -0.24
RABGGTA-206ENST00000558649 PQLC1Q8N2U9 271 aa13.57□□□□□ -0.24
RABGGTA-206ENST00000558649 CBR4Q8N4T8 237 aa13.57□□□□□ -0.24
RABGGTA-206ENST00000558649 TCEANCQ8N8B7 351 aa13.57□□□□□ -0.24
RABGGTA-206ENST00000558649 MAPK1IP1LQ8NDC0 245 aa13.57□□□□□ -0.24
RABGGTA-206ENST00000558649 FAM168AQ92567 244 aa13.57□□□□□ -0.24
RABGGTA-206ENST00000558649 SLAMF6Q96DU3 332 aa13.57□□□□□ -0.24
RABGGTA-206ENST00000558649 IL4I1Q96RQ9 567 aa13.57□□□□□ -0.24
RABGGTA-206ENST00000558649 DCLRE1CQ96SD1 692 aaKnown RBP13.57□□□□□ -0.24
RABGGTA-206ENST00000558649 RHNO1Q9BSD3 238 aa13.57□□□□□ -0.24
RABGGTA-206ENST00000558649 MS4A5Q9H3V2 200 aa13.57□□□□□ -0.24
RABGGTA-206ENST00000558649 TBCCD1Q9NVR7 557 aa13.57□□□□□ -0.24
RABGGTA-206ENST00000558649 GPR160Q9UJ42 338 aa13.57□□□□□ -0.24
RABGGTA-206ENST00000558649 IGHV4-30-2A0A087WSY4 118 aa13.56□□□□□ -0.24
RABGGTA-206ENST00000558649 ERICH4A6NGS2 130 aa13.56□□□□□ -0.24
RABGGTA-206ENST00000558649 TLX2O43763 284 aaPredicted RBP13.56□□□□□ -0.24
RABGGTA-206ENST00000558649 TIMM8AO60220 97 aaPredicted RBP13.56□□□□□ -0.24
RABGGTA-206ENST00000558649 IGHV3-13P01766 116 aa13.56□□□□□ -0.24
RABGGTA-206ENST00000558649 ALPLP05186 524 aa13.56□□□□□ -0.24
RABGGTA-206ENST00000558649 MRPL3P09001 348 aaKnown RBP13.56□□□□□ -0.24
RABGGTA-206ENST00000558649 ACSM4P0C7M7 580 aa13.56□□□□□ -0.24
RABGGTA-206ENST00000558649 SLC2A5P22732 501 aa13.56□□□□□ -0.24
RABGGTA-206ENST00000558649 RGS6P49758 472 aa13.56□□□□□ -0.24
RABGGTA-206ENST00000558649 HLXQ14774 488 aaPredicted RBP13.56□□□□□ -0.24
RABGGTA-206ENST00000558649 ZIK1Q3SY52 487 aaPredicted RBP13.56□□□□□ -0.24
RABGGTA-206ENST00000558649 C12orf73Q69YU5 71 aa13.56□□□□□ -0.24
RABGGTA-206ENST00000558649 NAA40Q86UY6 237 aa13.56□□□□□ -0.24
RABGGTA-206ENST00000558649 TIGD4Q8IY51 512 aa13.56□□□□□ -0.24
RABGGTA-206ENST00000558649 C1orf174Q8IYL3 243 aa13.56□□□□□ -0.24
RABGGTA-206ENST00000558649 SPTSSAQ969W0 71 aa13.56□□□□□ -0.24
RABGGTA-206ENST00000558649 APOBEC3DQ96AK3 386 aaPredicted RBP13.56□□□□□ -0.24
RABGGTA-206ENST00000558649 C18orf12Q96KH6 178 aa13.56□□□□□ -0.24
RABGGTA-206ENST00000558649 GABARAPL3Q9BY60 117 aa13.56□□□□□ -0.24
RABGGTA-206ENST00000558649 DLL4Q9NR61 685 aa13.56□□□□□ -0.24
RABGGTA-206ENST00000558649 N6AMT1Q9Y5N5 214 aa13.56□□□□□ -0.24
RABGGTA-206ENST00000558649 PLSCR5A0PG75 271 aa13.55□□□□□ -0.24
RABGGTA-206ENST00000558649 ZNF878C9JN71 531 aa13.55□□□□□ -0.24
RABGGTA-206ENST00000558649 M0R135 149 aa13.55□□□□□ -0.24
RABGGTA-206ENST00000558649 MT-ND5P03915 603 aa13.55□□□□□ -0.24
RABGGTA-206ENST00000558649 LCATP04180 440 aa13.55□□□□□ -0.24
RABGGTA-206ENST00000558649 INHBBP09529 407 aa13.55□□□□□ -0.24
RABGGTA-206ENST00000558649 DAOP14920 347 aa13.55□□□□□ -0.24
RABGGTA-206ENST00000558649 MAGEB1P43366 347 aa13.55□□□□□ -0.24
RABGGTA-206ENST00000558649 PDLIM4P50479 330 aa13.55□□□□□ -0.24
RABGGTA-206ENST00000558649 ALDH3A2P51648 485 aa13.55□□□□□ -0.24
RABGGTA-206ENST00000558649 TPTEP56180 551 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms