RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 KCTD18Q6PI47 426 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-234ENST00000557703 PRSS57Q6UWY2 283 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 SLC16A9Q7RTY1 509 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 ZNF511Q8NB15 262 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 OR51L1Q8NGJ5 315 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 OTOSQ8NHW6 89 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 ASB17Q8WXJ9 295 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 MRPL24Q96A35 216 aaKnown RBP11.81□□□□□ -0.52
SHMT2-234ENST00000557703 APOBEC3DQ96AK3 386 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-234ENST00000557703 IL4I1Q96RQ9 567 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 APOL4Q9BPW4 351 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 HCAR1Q9BXC0 346 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 PLK3Q9H4B4 646 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 WDR76Q9H967 626 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 BARX1Q9HBU1 254 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-234ENST00000557703 FAM118AQ9NWS6 357 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 SLCO1C1Q9NYB5 712 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 LAMP3Q9UQV4 416 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 PCDHGB1Q9Y5G3 927 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 HSPE1-MOB4S4R3N1 261 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 H0YAE9 185 aa11.8□□□□□ -0.52
SHMT2-234ENST00000557703 H7C417 338 aa11.8□□□□□ -0.52
SHMT2-234ENST00000557703 RRP9O43818 475 aaKnown RBP11.8□□□□□ -0.52
SHMT2-234ENST00000557703 SMPD2O60906 423 aa11.8□□□□□ -0.52
SHMT2-234ENST00000557703 ERCC1P07992 297 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-234ENST00000557703 CLUP10909 449 aa11.8□□□□□ -0.52
SHMT2-234ENST00000557703 HTR1FP30939 366 aa11.8□□□□□ -0.52
SHMT2-234ENST00000557703 SNRPD2P62316 118 aaKnown RBP11.8□□□□□ -0.52
SHMT2-234ENST00000557703 FAM209AQ5JX71 171 aa11.8□□□□□ -0.52
SHMT2-234ENST00000557703 MBNL2Q5VZF2 373 aaKnown RBP11.8□□□□□ -0.52
SHMT2-234ENST00000557703 C11orf71Q6IPW1 123 aa11.8□□□□□ -0.52
SHMT2-234ENST00000557703 KRT80Q6KB66 452 aa11.8□□□□□ -0.52
SHMT2-234ENST00000557703 DRAM2Q6UX65 266 aa11.8□□□□□ -0.52
SHMT2-234ENST00000557703 B3GLCTQ6Y288 498 aa11.8□□□□□ -0.52
SHMT2-234ENST00000557703 COLCA1Q6ZS62 124 aa11.8□□□□□ -0.52
SHMT2-234ENST00000557703 ZNF771Q7L3S4 317 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-234ENST00000557703 DPY19L4Q7Z388 723 aa11.8□□□□□ -0.52
SHMT2-234ENST00000557703 DCXRQ7Z4W1 244 aa11.8□□□□□ -0.52
SHMT2-234ENST00000557703 ERI1Q8IV48 349 aaKnown RBP11.8□□□□□ -0.52
SHMT2-234ENST00000557703 SETD9Q8NE22 299 aa11.8□□□□□ -0.52
SHMT2-234ENST00000557703 OR6N2Q8NGY6 317 aa11.8□□□□□ -0.52
SHMT2-234ENST00000557703 FAM81AQ8TBF8 368 aa11.8□□□□□ -0.52
SHMT2-234ENST00000557703 RNF133Q8WVZ7 376 aa11.8□□□□□ -0.52
SHMT2-234ENST00000557703 ZNRF4Q8WWF5 429 aa11.8□□□□□ -0.52
SHMT2-234ENST00000557703 FOXN4Q96NZ1 517 aa11.8□□□□□ -0.52
SHMT2-234ENST00000557703 CXXC4Q9H2H0 198 aa11.8□□□□□ -0.52
SHMT2-234ENST00000557703 MS4A5Q9H3V2 200 aa11.8□□□□□ -0.52
SHMT2-234ENST00000557703 OPA3Q9H6K4 179 aa11.8□□□□□ -0.52
SHMT2-234ENST00000557703 MED20Q9H944 212 aa11.8□□□□□ -0.52
SHMT2-234ENST00000557703 IGLV3-9A0A075B6K5 115 aa11.79□□□□□ -0.52
SHMT2-234ENST00000557703 TVP23AA6NH52 213 aa11.79□□□□□ -0.52
SHMT2-234ENST00000557703 ACOD1A6NK06 481 aa11.79□□□□□ -0.52
SHMT2-234ENST00000557703 ZNF254O75437 659 aa11.79□□□□□ -0.52
SHMT2-234ENST00000557703 GPANK1O95872 356 aa11.79□□□□□ -0.52
SHMT2-234ENST00000557703 CD8AP01732 235 aa11.79□□□□□ -0.52
SHMT2-234ENST00000557703 MT-ND5P03915 603 aa11.79□□□□□ -0.52
SHMT2-234ENST00000557703 LYNP07948 512 aa11.79□□□□□ -0.52
SHMT2-234ENST00000557703 SOD3P08294 240 aa11.79□□□□□ -0.52
SHMT2-234ENST00000557703 SPARCP09486 303 aa11.79□□□□□ -0.52
SHMT2-234ENST00000557703 CCNOP22674 350 aa11.79□□□□□ -0.52
SHMT2-234ENST00000557703 GCH1P30793 250 aa11.79□□□□□ -0.52
SHMT2-234ENST00000557703 DCTDP32321 178 aa11.79□□□□□ -0.52
SHMT2-234ENST00000557703 THBS4P35443 961 aa11.79□□□□□ -0.52
SHMT2-234ENST00000557703 PPOXP50336 477 aa11.79□□□□□ -0.52
SHMT2-234ENST00000557703 SHEQ5VZ18 495 aa11.79□□□□□ -0.52
SHMT2-234ENST00000557703 LPCAT4Q643R3 524 aa11.79□□□□□ -0.52
SHMT2-234ENST00000557703 DHRSXQ8N5I4 330 aa11.79□□□□□ -0.52
SHMT2-234ENST00000557703 RHOXF1Q8NHV9 184 aa11.79□□□□□ -0.52
SHMT2-234ENST00000557703 SYNPRQ8TBG9 265 aa11.79□□□□□ -0.52
SHMT2-234ENST00000557703 ST7LQ8TDW4 575 aa11.79□□□□□ -0.52
SHMT2-234ENST00000557703 NEUROG1Q92886 237 aa11.79□□□□□ -0.52
SHMT2-234ENST00000557703 SLAMF6Q96DU3 332 aa11.79□□□□□ -0.52
SHMT2-234ENST00000557703 ZMYND19Q96E35 227 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-234ENST00000557703 MAP6Q96JE9 813 aa11.79□□□□□ -0.52
SHMT2-234ENST00000557703 CNN2Q99439 309 aaKnown RBP11.79□□□□□ -0.52
SHMT2-234ENST00000557703 KCNJ15Q99712 375 aa11.79□□□□□ -0.52
SHMT2-234ENST00000557703 C1QTNF5Q9BXJ0 243 aa11.79□□□□□ -0.52
SHMT2-234ENST00000557703 PNRC2Q9NPJ4 139 aaKnown RBP11.79□□□□□ -0.52
SHMT2-234ENST00000557703 CYSLTR2Q9NS75 346 aa11.79□□□□□ -0.52
SHMT2-234ENST00000557703 LAMP5Q9UJQ1 280 aa11.79□□□□□ -0.52
SHMT2-234ENST00000557703 PLEKHA6Q9Y2H5 1048 aa11.79□□□□□ -0.52
SHMT2-234ENST00000557703 GRIP1Q9Y3R0 1128 aa11.79□□□□□ -0.52
SHMT2-234ENST00000557703 ARFGEF3Q5TH69 2177 aa11.79□□□□□ -0.52
SHMT2-234ENST00000557703 CCDC182A6NF36 153 aa11.78□□□□□ -0.52
SHMT2-234ENST00000557703 IGHV3-13P01766 116 aa11.78□□□□□ -0.52
SHMT2-234ENST00000557703 LCKP06239 509 aa11.78□□□□□ -0.52
SHMT2-234ENST00000557703 OR2T7P0C7T2 308 aa11.78□□□□□ -0.52
SHMT2-234ENST00000557703 RAC2P15153 192 aa11.78□□□□□ -0.52
SHMT2-234ENST00000557703 ALOX5APP20292 161 aa11.78□□□□□ -0.52
SHMT2-234ENST00000557703 PEX2P28328 305 aa11.78□□□□□ -0.52
SHMT2-234ENST00000557703 WNT5AP41221 380 aa11.78□□□□□ -0.52
SHMT2-234ENST00000557703 KLF3P57682 345 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-234ENST00000557703 PPP1CBP62140 327 aa11.78□□□□□ -0.52
SHMT2-234ENST00000557703 EIF2B1Q14232 305 aaKnown RBP11.78□□□□□ -0.52
SHMT2-234ENST00000557703 TAF13Q15543 124 aa11.78□□□□□ -0.52
SHMT2-234ENST00000557703 MST1LQ2TV78 715 aa11.78□□□□□ -0.52
SHMT2-234ENST00000557703 ZIK1Q3SY52 487 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-234ENST00000557703 ZMAT1Q5H9K5 638 aa11.78□□□□□ -0.52
SHMT2-234ENST00000557703 CORO6Q6QEF8 472 aa11.78□□□□□ -0.52
SHMT2-234ENST00000557703 CFAP77Q6ZQR2 320 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms