RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 ZFP1Q6P2D0 407 aa10.71□□□□□ -0.69
SLIRP-211ENST00000557623 CORO6Q6QEF8 472 aa10.71□□□□□ -0.69
SLIRP-211ENST00000557623 LRP11Q86VZ4 500 aa10.71□□□□□ -0.69
SLIRP-211ENST00000557623 IQCF1Q8N6M8 205 aa10.71□□□□□ -0.69
SLIRP-211ENST00000557623 ZNF525Q8N782 197 aa10.71□□□□□ -0.69
SLIRP-211ENST00000557623 OR9Q1Q8NGQ5 310 aa10.71□□□□□ -0.69
SLIRP-211ENST00000557623 SLC25A40Q8TBP6 338 aa10.71□□□□□ -0.69
SLIRP-211ENST00000557623 LRTOMTQ8WZ04 291 aa10.71□□□□□ -0.69
SLIRP-211ENST00000557623 MARS2Q96GW9 593 aaKnown RBP10.71□□□□□ -0.69
SLIRP-211ENST00000557623 PLEKHA8Q96JA3 519 aa10.71□□□□□ -0.69
SLIRP-211ENST00000557623 PITX2Q99697 317 aa10.71□□□□□ -0.69
SLIRP-211ENST00000557623 REG4Q9BYZ8 158 aa10.71□□□□□ -0.69
SLIRP-211ENST00000557623 GABARAPL1Q9H0R8 117 aa10.71□□□□□ -0.69
SLIRP-211ENST00000557623 SLC25A19Q9HC21 320 aa10.71□□□□□ -0.69
SLIRP-211ENST00000557623 MRPL22Q9NWU5 206 aaKnown RBP10.71□□□□□ -0.69
SLIRP-211ENST00000557623 TAAR3PQ9P1P4 343 aa10.71□□□□□ -0.69
SLIRP-211ENST00000557623 CYB5R1Q9UHQ9 305 aa10.71□□□□□ -0.69
SLIRP-211ENST00000557623 ENOPH1Q9UHY7 261 aa10.71□□□□□ -0.69
SLIRP-211ENST00000557623 GRIP1Q9Y3R0 1128 aa10.71□□□□□ -0.69
SLIRP-211ENST00000557623 LOC390937A0A1W2PQ73 354 aa10.7□□□□□ -0.7
SLIRP-211ENST00000557623 PRR23D1E9PI22 279 aaPredicted RBP10.7□□□□□ -0.7
SLIRP-211ENST00000557623 SMAD7O15105 426 aaKnown RBP10.7□□□□□ -0.7
SLIRP-211ENST00000557623 SURF4O15260 269 aa10.7□□□□□ -0.7
SLIRP-211ENST00000557623 CLPTM1O96005 669 aa10.7□□□□□ -0.7
SLIRP-211ENST00000557623 NGFP01138 241 aa10.7□□□□□ -0.7
SLIRP-211ENST00000557623 GYPBP06028 91 aa10.7□□□□□ -0.7
SLIRP-211ENST00000557623 PRR23D2P0DMB1 279 aaPredicted RBP10.7□□□□□ -0.7
SLIRP-211ENST00000557623 LIPAP38571 399 aa10.7□□□□□ -0.7
SLIRP-211ENST00000557623 ALDH3B1P43353 468 aa10.7□□□□□ -0.7
SLIRP-211ENST00000557623 DAPP51397 102 aa10.7□□□□□ -0.7
SLIRP-211ENST00000557623 CRISP1P54107 249 aa10.7□□□□□ -0.7
SLIRP-211ENST00000557623 KPNB1Q14974 876 aaKnown RBP10.7□□□□□ -0.7
SLIRP-211ENST00000557623 TEX30Q5JUR7 227 aa10.7□□□□□ -0.7
SLIRP-211ENST00000557623 RFPL4BQ6ZWI9 263 aa10.7□□□□□ -0.7
SLIRP-211ENST00000557623 AMIGO2Q86SJ2 522 aa10.7□□□□□ -0.7
SLIRP-211ENST00000557623 LINC00346Q8IVM7 164 aa10.7□□□□□ -0.7
SLIRP-211ENST00000557623 ZCCHC24Q8N2G6 241 aaKnown RBP10.7□□□□□ -0.7
SLIRP-211ENST00000557623 CIARTQ8N365 385 aaPredicted RBP10.7□□□□□ -0.7
SLIRP-211ENST00000557623 OR51L1Q8NGJ5 315 aa10.7□□□□□ -0.7
SLIRP-211ENST00000557623 OR5L1Q8NGL2 311 aa10.7□□□□□ -0.7
SLIRP-211ENST00000557623 OR6K6Q8NGW6 343 aa10.7□□□□□ -0.7
SLIRP-211ENST00000557623 KLF14Q8TD94 323 aaPredicted RBP10.7□□□□□ -0.7
SLIRP-211ENST00000557623 OTULINQ96BN8 352 aa10.7□□□□□ -0.7
SLIRP-211ENST00000557623 CENPNQ96H22 339 aaPredicted RBP10.7□□□□□ -0.7
SLIRP-211ENST00000557623 ATF6BQ99941 703 aa10.7□□□□□ -0.7
SLIRP-211ENST00000557623 OSBPL10Q9BXB5 764 aa10.7□□□□□ -0.7
SLIRP-211ENST00000557623 PRRG3Q9BZD7 231 aa10.7□□□□□ -0.7
SLIRP-211ENST00000557623 OR2J1Q9GZK6 312 aa10.7□□□□□ -0.7
SLIRP-211ENST00000557623 CYSLTR2Q9NS75 346 aa10.7□□□□□ -0.7
SLIRP-211ENST00000557623 KRT84Q9NSB2 600 aa10.7□□□□□ -0.7
SLIRP-211ENST00000557623 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.7□□□□□ -0.7
SLIRP-211ENST00000557623 MYEF2Q9P2K5 600 aaKnown RBP10.7□□□□□ -0.7
SLIRP-211ENST00000557623 CGGBP1Q9UFW8 167 aaPredicted RBP10.7□□□□□ -0.7
SLIRP-211ENST00000557623 COMMD3-BMI1R4GMX3 469 aa10.7□□□□□ -0.7
SLIRP-211ENST00000557623 YLPM1P49750 1951 aaKnown RBP10.7□□□□□ -0.7
SLIRP-211ENST00000557623 HIVEP1P15822 2718 aa10.69□□□□□ -0.7
SLIRP-211ENST00000557623 IGHV4-30-2A0A087WSY4 118 aa10.69□□□□□ -0.7
SLIRP-211ENST00000557623 PLSCR5A0PG75 271 aa10.69□□□□□ -0.7
SLIRP-211ENST00000557623 TVP23AA6NH52 213 aa10.69□□□□□ -0.7
SLIRP-211ENST00000557623 C17orf100A8MU93 164 aa10.69□□□□□ -0.7
SLIRP-211ENST00000557623 LY6HO94772 140 aa10.69□□□□□ -0.7
SLIRP-211ENST00000557623 GLCEO94923 617 aa10.69□□□□□ -0.7
SLIRP-211ENST00000557623 CLUP10909 449 aa10.69□□□□□ -0.7
SLIRP-211ENST00000557623 NAT2P11245 290 aa10.69□□□□□ -0.7
SLIRP-211ENST00000557623 DAOP14920 347 aa10.69□□□□□ -0.7
SLIRP-211ENST00000557623 ENTPD1P49961 510 aa10.69□□□□□ -0.7
SLIRP-211ENST00000557623 MAD2L1BPQ15013 274 aaPredicted RBP10.69□□□□□ -0.7
SLIRP-211ENST00000557623 PCGF3Q3KNV8 242 aa10.69□□□□□ -0.7
SLIRP-211ENST00000557623 SPATA46Q5T0L3 261 aa10.69□□□□□ -0.7
SLIRP-211ENST00000557623 TMEM154Q6P9G4 183 aa10.69□□□□□ -0.7
SLIRP-211ENST00000557623 CFAP77Q6ZQR2 320 aa10.69□□□□□ -0.7
SLIRP-211ENST00000557623 ZNF540Q8NDQ6 660 aa10.69□□□□□ -0.7
SLIRP-211ENST00000557623 C10orf105Q8TEF2 133 aa10.69□□□□□ -0.7
SLIRP-211ENST00000557623 UBASH3BQ8TF42 649 aa10.69□□□□□ -0.7
SLIRP-211ENST00000557623 ZNRF4Q8WWF5 429 aa10.69□□□□□ -0.7
SLIRP-211ENST00000557623 PYDC1Q8WXC3 89 aa10.69□□□□□ -0.7
SLIRP-211ENST00000557623 SLC7A6Q92536 515 aa10.69□□□□□ -0.7
SLIRP-211ENST00000557623 APOBEC3DQ96AK3 386 aaPredicted RBP10.69□□□□□ -0.7
SLIRP-211ENST00000557623 PIMREGQ9BSJ6 248 aa10.69□□□□□ -0.7
SLIRP-211ENST00000557623 TPK1Q9H3S4 243 aa10.69□□□□□ -0.7
SLIRP-211ENST00000557623 HINT3Q9NQE9 182 aaKnown RBP10.69□□□□□ -0.7
SLIRP-211ENST00000557623 CELSR1Q9NYQ6 3014 aa10.69□□□□□ -0.7
SLIRP-211ENST00000557623 ZNF469Q96JG9 3925 aaPredicted RBP10.68□□□□□ -0.7
SLIRP-211ENST00000557623 FAM183AA6NL82 134 aa10.68□□□□□ -0.7
SLIRP-211ENST00000557623 ZNF593O00488 134 aaPredicted RBP10.68□□□□□ -0.7
SLIRP-211ENST00000557623 PRODHO43272 600 aa10.68□□□□□ -0.7
SLIRP-211ENST00000557623 DBHP09172 617 aa10.68□□□□□ -0.7
SLIRP-211ENST00000557623 SPARCP09486 303 aa10.68□□□□□ -0.7
SLIRP-211ENST00000557623 GSTT1P30711 240 aa10.68□□□□□ -0.7
SLIRP-211ENST00000557623 MPV17P39210 176 aa10.68□□□□□ -0.7
SLIRP-211ENST00000557623 TPTEP56180 551 aa10.68□□□□□ -0.7
SLIRP-211ENST00000557623 DBPQ10586 325 aaPredicted RBP10.68□□□□□ -0.7
SLIRP-211ENST00000557623 PTGES3Q15185 160 aaKnown RBP10.68□□□□□ -0.7
SLIRP-211ENST00000557623 SNAPC1Q16533 368 aa10.68□□□□□ -0.7
SLIRP-211ENST00000557623 CARTPTQ16568 116 aa10.68□□□□□ -0.7
SLIRP-211ENST00000557623 PCK2Q16822 640 aa10.68□□□□□ -0.7
SLIRP-211ENST00000557623 ALKBH6Q3KRA9 238 aa10.68□□□□□ -0.7
SLIRP-211ENST00000557623 ZMAT1Q5H9K5 638 aa10.68□□□□□ -0.7
SLIRP-211ENST00000557623 SLC35D3Q5M8T2 416 aa10.68□□□□□ -0.7
SLIRP-211ENST00000557623 LINC01590Q5TEZ4 76 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms