RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 SLC35D2Q76EJ3 337 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 BATF2Q8N1L9 274 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 C19orf47Q8N9M1 422 aaKnown RBP4.6□□□□□ -1.67
TMEM260-210ENST00000556422 OR51L1Q8NGJ5 315 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 THAP6Q8TBB0 222 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 STACQ99469 402 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 PRRT1Q99946 306 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 RAB1BQ9H0U4 201 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 TRIM36Q9NQ86 728 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 SCP2D1Q9UJQ7 156 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 TMEM184BQ9Y519 407 aaPredicted RBP4.6□□□□□ -1.67
TMEM260-210ENST00000556422 PNMA8CA0A1B0GUJ8 204 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 GXYLT2A0PJZ3 443 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 OR2W5A6NFC9 320 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 BHLHE40O14503 412 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 OGG1O15527 345 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 HRO43593 1189 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 TSPAN2O60636 221 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 ZGLP1P0C6A0 271 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 GKN3PP0CG01 181 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 PNMTP11086 282 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 FUT1P19526 365 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 CD80P33681 288 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 MAS1LP35410 378 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 RORCP51449 518 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 RAB38P57729 211 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 RAB11AP62491 216 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 MC2RQ01718 297 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 RAB11BQ15907 218 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 AKR1C8PQ5T2L2 129 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 SFRP5Q5T4F7 317 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 ZNF620Q6ZNG0 422 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 TMEM144Q7Z5S9 345 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 DEFB119Q8N690 84 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 OR4M1Q8NGD0 313 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 OR52I1Q8NGK6 324 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 MCFD2Q8NI22 146 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 GPR151Q8TDV0 419 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 KLHDC7BQ96G42 594 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 SLC41A3Q96GZ6 507 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 FAM210BQ96KR6 192 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 DCLRE1CQ96SD1 692 aaKnown RBP4.6□□□□□ -1.67
TMEM260-210ENST00000556422 MCHR1Q99705 422 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 ASCL2Q99929 193 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 ZNF649Q9BS31 505 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 PHF7Q9BWX1 381 aaPredicted RBP4.6□□□□□ -1.67
TMEM260-210ENST00000556422 C20orf141Q9NUB4 165 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 MRPS18AQ9NVS2 196 aaKnown RBP4.6□□□□□ -1.67
TMEM260-210ENST00000556422 SLC7A7Q9UM01 511 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 A0A087WZY1 265 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 TRBV11-1A0A0K0K1C0 115 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 SEC14L6B5MCN3 397 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 SNAI2O43623 268 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 IGKV1D-16P01601 117 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 SNRPCP09234 159 aaKnown RBP4.6□□□□□ -1.67
TMEM260-210ENST00000556422 IFI6P09912 130 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 OR8U8P0C7N1 319 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 CTSEP14091 401 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 MAKP20794 623 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 OTX2P32243 289 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 ZNF528Q3MIS6 628 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 ZNF404Q494X3 552 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 CLEC12AQ5QGZ9 265 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 OR8G2PQ6IF36 304 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 FIGNL1Q6PIW4 674 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 ZNF730Q6ZMV8 503 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 MBOAT2Q6ZWT7 520 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 C17orf82Q86X59 251 aaPredicted RBP4.6□□□□□ -1.67
TMEM260-210ENST00000556422 RNF113BQ8IZP6 322 aaKnown RBP4.6□□□□□ -1.67
TMEM260-210ENST00000556422 GJD3Q8N144 294 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 CDRT4Q8N9R6 151 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 ZNF485Q8NCK3 441 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 OR8U1Q8NH10 309 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 TMEM163Q8TC26 289 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 FAM222BQ8WU58 562 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 TNFAIP8L1Q8WVP5 186 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 HCN3Q9P1Z3 774 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 MRPS18CQ9Y3D5 142 aaKnown RBP4.6□□□□□ -1.67
TMEM260-210ENST00000556422 RPL36Q9Y3U8 105 aaKnown RBP4.6□□□□□ -1.67
TMEM260-210ENST00000556422 ASCC3Q8N3C0 2202 aaKnown RBP4.59□□□□□ -1.67
TMEM260-210ENST00000556422 GJE1A6NN92 205 aa4.59□□□□□ -1.67
TMEM260-210ENST00000556422 AQP7O14520 342 aa4.59□□□□□ -1.67
TMEM260-210ENST00000556422 PHOX2AO14813 284 aa4.59□□□□□ -1.67
TMEM260-210ENST00000556422 ST8SIA3O43173 380 aa4.59□□□□□ -1.67
TMEM260-210ENST00000556422 HYAL3O43820 417 aaPredicted RBP4.59□□□□□ -1.67
TMEM260-210ENST00000556422 CA11O75493 328 aa4.59□□□□□ -1.67
TMEM260-210ENST00000556422 NKX2-2O95096 273 aa4.59□□□□□ -1.67
TMEM260-210ENST00000556422 C1QBP02746 253 aa4.59□□□□□ -1.67
TMEM260-210ENST00000556422 TNFRSF1AP19438 455 aa4.59□□□□□ -1.67
TMEM260-210ENST00000556422 DCTDP32321 178 aa4.59□□□□□ -1.67
TMEM260-210ENST00000556422 CRYBB2P43320 205 aa4.59□□□□□ -1.67
TMEM260-210ENST00000556422 EMDP50402 254 aa4.59□□□□□ -1.67
TMEM260-210ENST00000556422 MRPS10P82664 201 aaKnown RBP4.59□□□□□ -1.67
TMEM260-210ENST00000556422 ZNF155Q12901 538 aaPredicted RBP4.59□□□□□ -1.67
TMEM260-210ENST00000556422 FAM53BQ14153 422 aa4.59□□□□□ -1.67
TMEM260-210ENST00000556422 SPHARQ15513 63 aa4.59□□□□□ -1.67
TMEM260-210ENST00000556422 SURF2Q15527 256 aaPredicted RBP4.59□□□□□ -1.67
TMEM260-210ENST00000556422 SAMD13Q5VXD3 122 aa4.59□□□□□ -1.67
TMEM260-210ENST00000556422 SLC34A3Q8N130 599 aa4.59□□□□□ -1.67
TMEM260-210ENST00000556422 EXD3Q8N9H8 876 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms