RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.28□□□□□ -1.08
SRP54-210ENST00000556380 CPOQ8IVL8 374 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 OR10S1Q8NGN2 331 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 SLC7A6Q92536 515 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 TRMT61AQ96FX7 289 aaKnown RBP8.28□□□□□ -1.08
SRP54-210ENST00000556380 MARS2Q96GW9 593 aaKnown RBP8.28□□□□□ -1.08
SRP54-210ENST00000556380 MAP6Q96JE9 813 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 C4orf45Q96LM5 186 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 COQ7Q99807 217 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 GABARAPL3Q9BY60 117 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 BCL2L14Q9BZR8 327 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 WDR76Q9H967 626 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 HINT3Q9NQE9 182 aaKnown RBP8.28□□□□□ -1.08
SRP54-210ENST00000556380 KRT84Q9NSB2 600 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 TBCCD1Q9NVR7 557 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 PLEK2Q9NYT0 353 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 USE1Q9NZ43 259 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 KIF17Q9P2E2 1029 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 ATPIF1Q9UII2 106 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 NDRG4Q9ULP0 352 aaKnown RBP8.28□□□□□ -1.08
SRP54-210ENST00000556380 COMMD3-BMI1R4GMX3 469 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 PRKYO43930 277 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 DOK2O60496 412 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 GLCEO94923 617 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 CLPTM1O96005 669 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 HLA-DQA2P01906 255 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 ALPLP05186 524 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 DBHP09172 617 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 ZNF823P16415 610 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 CCNOP22674 350 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 IGFBP5P24593 272 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 RPS27P42677 84 aaKnown RBP8.27□□□□□ -1.09
SRP54-210ENST00000556380 HTR5AP47898 357 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 PPOXP50336 477 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 BLVRAP53004 296 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 SNAPC1Q16533 368 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 C12orf73Q69YU5 71 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 PLBD1Q6P4A8 553 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 COLCA1Q6ZS62 124 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 RFPL4BQ6ZWI9 263 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 LURAP1LQ8IV03 231 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 LINC00346Q8IVM7 164 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 TIGD4Q8IY51 512 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 C1orf174Q8IYL3 243 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 PQLC1Q8N2U9 271 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 ICA1LQ8NDH6 482 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 BBS1Q8NFJ9 593 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 OR10H5Q8NGA6 315 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 SLC29A1Q99808 456 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 RBM4BQ9BQ04 359 aaKnown RBP8.27□□□□□ -1.09
SRP54-210ENST00000556380 HDHD2Q9H0R4 259 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 DLL4Q9NR61 685 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 DDX28Q9NUL7 540 aaKnown RBP8.27□□□□□ -1.09
SRP54-210ENST00000556380 TVP23BQ9NYZ1 205 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 MYEF2Q9P2K5 600 aaKnown RBP8.27□□□□□ -1.09
SRP54-210ENST00000556380 EIF3KQ9UBQ5 218 aaKnown RBP8.27□□□□□ -1.09
SRP54-210ENST00000556380 ENOPH1Q9UHY7 261 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 FZR1Q9UM11 496 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 PMF1-BGLAPU3KQ54 211 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 NSD1Q96L73 2696 aaPredicted RBP8.27□□□□□ -1.09
SRP54-210ENST00000556380 MED13LQ71F56 2210 aa8.27□□□□□ -1.09
SRP54-210ENST00000556380 ANKRD65E5RJM6 399 aa8.26□□□□□ -1.09
SRP54-210ENST00000556380 PRR23D1E9PI22 279 aaPredicted RBP8.26□□□□□ -1.09
SRP54-210ENST00000556380 H3BSA7 217 aa8.26□□□□□ -1.09
SRP54-210ENST00000556380 ZNF593O00488 134 aaPredicted RBP8.26□□□□□ -1.09
SRP54-210ENST00000556380 IGHV3-13P01766 116 aa8.26□□□□□ -1.09
SRP54-210ENST00000556380 LCKP06239 509 aa8.26□□□□□ -1.09
SRP54-210ENST00000556380 PRR23D2P0DMB1 279 aaPredicted RBP8.26□□□□□ -1.09
SRP54-210ENST00000556380 PAICSP22234 425 aaKnown RBP8.26□□□□□ -1.09
SRP54-210ENST00000556380 GSTT1P30711 240 aa8.26□□□□□ -1.09
SRP54-210ENST00000556380 OTX1P32242 354 aaPredicted RBP8.26□□□□□ -1.09
SRP54-210ENST00000556380 ENTPD1P49961 510 aa8.26□□□□□ -1.09
SRP54-210ENST00000556380 EFNA4P52798 201 aa8.26□□□□□ -1.09
SRP54-210ENST00000556380 PPP1CBP62140 327 aa8.26□□□□□ -1.09
SRP54-210ENST00000556380 SNRPD2P62316 118 aaKnown RBP8.26□□□□□ -1.09
SRP54-210ENST00000556380 ECH1Q13011 328 aa8.26□□□□□ -1.09
SRP54-210ENST00000556380 AADACL4Q5VUY2 407 aa8.26□□□□□ -1.09
SRP54-210ENST00000556380 MBNL2Q5VZF2 373 aaKnown RBP8.26□□□□□ -1.09
SRP54-210ENST00000556380 RGS7BPQ6MZT1 257 aaPredicted RBP8.26□□□□□ -1.09
SRP54-210ENST00000556380 ZCCHC24Q8N2G6 241 aaKnown RBP8.26□□□□□ -1.09
SRP54-210ENST00000556380 CBR4Q8N4T8 237 aa8.26□□□□□ -1.09
SRP54-210ENST00000556380 OR1J1Q8NGS3 322 aa8.26□□□□□ -1.09
SRP54-210ENST00000556380 ABHD4Q8TB40 342 aa8.26□□□□□ -1.09
SRP54-210ENST00000556380 SYNPRQ8TBG9 265 aa8.26□□□□□ -1.09
SRP54-210ENST00000556380 SLC25A40Q8TBP6 338 aa8.26□□□□□ -1.09
SRP54-210ENST00000556380 KLF14Q8TD94 323 aaPredicted RBP8.26□□□□□ -1.09
SRP54-210ENST00000556380 ST7LQ8TDW4 575 aa8.26□□□□□ -1.09
SRP54-210ENST00000556380 SORCS2Q96PQ0 1159 aa8.26□□□□□ -1.09
SRP54-210ENST00000556380 DCLRE1CQ96SD1 692 aaKnown RBP8.26□□□□□ -1.09
SRP54-210ENST00000556380 PITX2Q99697 317 aa8.26□□□□□ -1.09
SRP54-210ENST00000556380 SYT3Q9BQG1 590 aa8.26□□□□□ -1.09
SRP54-210ENST00000556380 CDADC1Q9BWV3 514 aa8.26□□□□□ -1.09
SRP54-210ENST00000556380 OR2J1Q9GZK6 312 aa8.26□□□□□ -1.09
SRP54-210ENST00000556380 OR51V1Q9H2C8 321 aa8.26□□□□□ -1.09
SRP54-210ENST00000556380 OR51B6Q9H340 312 aa8.26□□□□□ -1.09
SRP54-210ENST00000556380 POFUT1Q9H488 388 aa8.26□□□□□ -1.09
SRP54-210ENST00000556380 ELOVL3Q9HB03 270 aa8.26□□□□□ -1.09
SRP54-210ENST00000556380 BARX1Q9HBU1 254 aaPredicted RBP8.26□□□□□ -1.09
SRP54-210ENST00000556380 DUSP13Q9UII6 198 aa8.26□□□□□ -1.09
SRP54-210ENST00000556380 FBXO9Q9UK97 447 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms