RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 KRT77Q7Z794 578 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 EGFL6Q8IUX8 553 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 ZNF584Q8IVC4 421 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 ACBD7Q8N6N7 88 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 CPEB3Q8NE35 698 aaKnown RBP6.62□□□□□ -1.35
TDP1-214ENST00000556063 OR10H4Q8NGA5 316 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 OR5L1Q8NGL2 311 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 CNIH3Q8TBE1 160 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 ST7LQ8TDW4 575 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 RNF133Q8WVZ7 376 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 APH1BQ8WW43 257 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 MAP6Q96JE9 813 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 POM121L2Q96KW2 1035 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 KCNJ15Q99712 375 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 TMEM204Q9BSN7 226 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 MROQ9BYG7 248 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 BCL2L14Q9BZR8 327 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 CLEC4MQ9H2X3 399 aaPredicted RBP6.62□□□□□ -1.35
TDP1-214ENST00000556063 AMBNQ9NP70 447 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 TUBG2Q9NRH3 451 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 INPP5EQ9NRR6 644 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 PLCXD1Q9NUJ7 323 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 DDX28Q9NUL7 540 aaKnown RBP6.62□□□□□ -1.35
TDP1-214ENST00000556063 FAIMQ9NVQ4 179 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 MRPS18AQ9NVS2 196 aaKnown RBP6.62□□□□□ -1.35
TDP1-214ENST00000556063 CHCHD3Q9NX63 227 aaKnown RBP6.62□□□□□ -1.35
TDP1-214ENST00000556063 AASSQ9UDR5 926 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 IKZF2Q9UKS7 526 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 BLOC1S6Q9UL45 172 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 TPRKBQ9Y3C4 175 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 GRIP1Q9Y3R0 1128 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 DSCAMO60469 2012 aa6.62□□□□□ -1.35
TDP1-214ENST00000556063 HECTD1Q9ULT8 2610 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 DAPL1A0PJW8 107 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 FAM221AA4D161 298 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 ATP6V1G2-DDX39BF2Z307 99 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 F5H5K5 113 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 M0R135 149 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 DENRO43583 198 aaKnown RBP6.61□□□□□ -1.35
TDP1-214ENST00000556063 FAM20BO75063 409 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 WBP4O75554 376 aaKnown RBP6.61□□□□□ -1.35
TDP1-214ENST00000556063 KRT8P05787 483 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 LCKP06239 509 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 TACSTD2P09758 323 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 MYL12AP19105 171 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 NR4A1P22736 598 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 DCKP27707 260 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 DCTDP32321 178 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 GLRXP35754 106 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 SLC6A9P48067 706 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 RIDAP52758 137 aaKnown RBP6.61□□□□□ -1.35
TDP1-214ENST00000556063 ROM1Q03395 351 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 EGR3Q06889 387 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 SNTB2Q13425 540 aaKnown RBP6.61□□□□□ -1.35
TDP1-214ENST00000556063 ZNF829Q3KNS6 432 aaPredicted RBP6.61□□□□□ -1.35
TDP1-214ENST00000556063 C6orf141Q5SZD1 244 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 ZNF544Q6NX49 715 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 ZNF322Q6U7Q0 402 aaPredicted RBP6.61□□□□□ -1.35
TDP1-214ENST00000556063 DRAM2Q6UX65 266 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 SPATC1Q76KD6 591 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 FAM220AQ7Z4H9 259 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 KCTD20Q7Z5Y7 419 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 ZNF679Q8IYX0 411 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 ZNF283Q8N7M2 679 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 NUP37Q8NFH4 326 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 BPIFB6Q8NFQ5 453 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 FBLIM1Q8WUP2 373 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 SNX33Q8WV41 574 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 AKAP1Q92667 903 aaKnown RBP eCLIP6.61□□□□□ -1.35
TDP1-214ENST00000556063 MYDGFQ969H8 173 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 FBXW5Q969U6 566 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 APOBEC3DQ96AK3 386 aaPredicted RBP6.61□□□□□ -1.35
TDP1-214ENST00000556063 LGALS12Q96DT0 336 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 ZNF799Q96GE5 643 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 C4orf45Q96LM5 186 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 CNBD2Q96M20 576 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 OR8B4Q96RC9 309 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 DHRS9Q9BPW9 319 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 ZNF442Q9H7R0 627 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 TBCCD1Q9NVR7 557 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 CISD1Q9NZ45 108 aaKnown RBP6.61□□□□□ -1.35
TDP1-214ENST00000556063 CNOT2Q9NZN8 540 aaKnown RBP6.61□□□□□ -1.35
TDP1-214ENST00000556063 FBXO9Q9UK97 447 aaPredicted RBP6.61□□□□□ -1.35
TDP1-214ENST00000556063 EXOGQ9Y2C4 368 aaKnown RBP6.61□□□□□ -1.35
TDP1-214ENST00000556063 ARID1AO14497 2285 aa6.61□□□□□ -1.35
TDP1-214ENST00000556063 FLNBO75369 2602 aaKnown RBP6.6□□□□□ -1.35
TDP1-214ENST00000556063 LOC100509620A0A075B734 347 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 A0A1W2PQL4 384 aaPredicted RBP6.6□□□□□ -1.35
TDP1-214ENST00000556063 METTL15A6NJ78 407 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 ACOD1A6NK06 481 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 SHISA9B4DS77 424 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 H3BSA7 217 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 HS3ST1O14792 307 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 SIAH2O43255 324 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 ICMTO60725 284 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 SULT1C4O75897 302 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 APOL3O95236 402 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 LCATP04180 440 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 CCDC159P0C7I6 412 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 FAM157BP0CG42 384 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms