RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 MRPL39Q9NYK5 338 aaKnown RBP3.99□□□□□ -1.77
ATXN3-229ENST00000554672 PSMC3IPQ9P2W1 217 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-229ENST00000554672 IL19Q9UHD0 177 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 BTNL2Q9UIR0 455 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 PPP1R3CQ9UQK1 317 aa3.99□□□□□ -1.77
ATXN3-229ENST00000554672 ZNF443Q9Y2A4 671 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-229ENST00000554672 IGKV1D-42A0A075B6H8 117 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 A0A0G2JPF8 293 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 CENPVL3A0A0U1RRI6 287 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 C5orf49A4QMS7 147 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 HNRNPCL2B2RXH8 293 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 ZNF879B4DU55 563 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 HNRNPCL3B7ZW38 293 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 COPEO14579 308 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 TIMM8AO60220 97 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-229ENST00000554672 HNRNPCL1O60812 293 aaKnown RBP3.98□□□□□ -1.77
ATXN3-229ENST00000554672 SHOX2O60902 331 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-229ENST00000554672 SERPINI2O75830 405 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 OR6A2O95222 327 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 FSTL3O95633 263 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 IGHV4-59P01825 116 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 C1QCP02747 245 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 BGLAPP02818 100 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 SFTPBP07988 381 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 MMP7P09237 267 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-229ENST00000554672 QDPRP09417 244 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 HNRNPCL4P0DMR1 293 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 TUBG1P23258 451 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 S100A3P33764 101 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 SERPINB5P36952 375 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 TGFBR2P37173 567 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 WNT5AP41221 380 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 ARHGDIAP52565 204 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 CLNS1AP54105 237 aaKnown RBP3.98□□□□□ -1.77
ATXN3-229ENST00000554672 CRISP3P54108 245 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 PPP1CBP62140 327 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 HOXC5Q00444 222 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 EMX1Q04741 257 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-229ENST00000554672 LRRC74AQ0VAA2 488 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 PSG7Q13046 419 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 ALG10BQ5I7T1 473 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 DEFB121Q5J5C9 76 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 PABPC1L2AQ5JQF8 200 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 TMEM255AQ5JRV8 349 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 FAM91A1Q658Y4 838 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 DHRS7BQ6IAN0 325 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-229ENST00000554672 SLC35E4Q6ICL7 350 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 C11orf87Q6NUJ2 197 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 ULK3Q6PHR2 472 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 C11orf88Q6PI97 169 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 ARL9Q6T311 187 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 SLC35D2Q76EJ3 337 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 ZNF101Q8IZC7 436 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 C10orf53Q8N6V4 93 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 MNS1Q8NEH6 495 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 OR2Z1Q8NG97 314 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 OR8B3Q8NGG8 313 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 SLC38A5Q8WUX1 472 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 C10orf82Q8WW14 230 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.98□□□□□ -1.77
ATXN3-229ENST00000554672 ZNF566Q969W8 418 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 TESCQ96BS2 214 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 SLC25A44Q96H78 314 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-229ENST00000554672 POM121L2Q96KW2 1035 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 ZIM3Q96PE6 472 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 OR8B2Q96RD0 313 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 PANX1Q96RD7 426 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 TMEM246Q9BRR3 403 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 PCGF1Q9BSM1 259 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 SIAEQ9HAT2 523 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 ELOVL3Q9HB03 270 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 TUBG2Q9NRH3 451 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 THUMPD1Q9NXG2 353 aaKnown RBP3.98□□□□□ -1.77
ATXN3-229ENST00000554672 SELENONQ9NZV5 590 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 CLN8Q9UBY8 286 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 USH1CQ9Y6N9 552 aa3.98□□□□□ -1.77
ATXN3-229ENST00000554672 WNK2Q9Y3S1 2297 aa3.97□□□□□ -1.77
ATXN3-229ENST00000554672 LOC100509620A0A075B734 347 aa3.97□□□□□ -1.77
ATXN3-229ENST00000554672 IGHV1-69DA0A0B4J2H0 117 aa3.97□□□□□ -1.77
ATXN3-229ENST00000554672 A0A1B0GWA3 101 aa3.97□□□□□ -1.77
ATXN3-229ENST00000554672 BTBD17A6NE02 478 aa3.97□□□□□ -1.77
ATXN3-229ENST00000554672 TMEM247A6NEH6 219 aa3.97□□□□□ -1.77
ATXN3-229ENST00000554672 CGB1A6NKQ9 187 aa3.97□□□□□ -1.77
ATXN3-229ENST00000554672 LRRC30A6NM36 301 aa3.97□□□□□ -1.77
ATXN3-229ENST00000554672 RNASEK-C17orf49H0YIS7 233 aa3.97□□□□□ -1.77
ATXN3-229ENST00000554672 PHYHO14832 338 aa3.97□□□□□ -1.77
ATXN3-229ENST00000554672 RIPK2O43353 540 aa3.97□□□□□ -1.77
ATXN3-229ENST00000554672 ENSAO43768 121 aaKnown RBP3.97□□□□□ -1.77
ATXN3-229ENST00000554672 MT-ATP6P00846 226 aa3.97□□□□□ -1.77
ATXN3-229ENST00000554672 IGHV1-69P01742 117 aa3.97□□□□□ -1.77
ATXN3-229ENST00000554672 IGHG1P01857 330 aa3.97□□□□□ -1.77
ATXN3-229ENST00000554672 ADORA3P0DMS8 318 aa3.97□□□□□ -1.77
ATXN3-229ENST00000554672 THRBP10828 461 aa3.97□□□□□ -1.77
ATXN3-229ENST00000554672 GSTM3P21266 225 aa3.97□□□□□ -1.77
ATXN3-229ENST00000554672 EPHA3P29320 983 aa3.97□□□□□ -1.77
ATXN3-229ENST00000554672 ALDH3A1P30838 453 aa3.97□□□□□ -1.77
ATXN3-229ENST00000554672 GABRA5P31644 462 aa3.97□□□□□ -1.77
ATXN3-229ENST00000554672 CFHR2P36980 270 aa3.97□□□□□ -1.77
ATXN3-229ENST00000554672 CRATP43155 626 aa3.97□□□□□ -1.77
ATXN3-229ENST00000554672 KIR2DS4P43632 304 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms