RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 RBMXL1Q96E39 390 aaKnown RBP3.02□□□□□ -1.93
SYNE2-212ENST00000554584 SPOCK3Q9BQ16 436 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 RSPO3Q9BXY4 272 aaPredicted RBP3.02□□□□□ -1.93
SYNE2-212ENST00000554584 OR5V1Q9UGF6 321 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 RAB29O14966 203 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 EMC8O43402 210 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 DENRO43583 198 aaKnown RBP3.02□□□□□ -1.93
SYNE2-212ENST00000554584 C1SP09871 688 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 HKR1P10072 659 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 FOLR1P15328 257 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 TPSB2P20231 275 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 NTSR1P30989 418 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 TPSAB1Q15661 275 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 TMEM41BQ5BJD5 291 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 OR52E8Q6IFG1 317 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 LBX2Q6XYB7 198 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 SGPP2Q8IWX5 399 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 PHOSPHO2Q8TCD6 241 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 C11orf40Q8WZ69 217 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 NTAN1Q96AB6 310 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 NT5DC2Q9H857 520 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 DUSP22Q9NRW4 184 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 GDF2Q9UK05 429 aaPredicted RBP3.02□□□□□ -1.93
SYNE2-212ENST00000554584 PHIPQ8WWQ0 1821 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 PHOX2AO14813 284 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 LYZL6O75951 148 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 CST4P01036 141 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 UBE3DQ7Z6J8 389 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 PLXDC1Q8IUK5 500 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 UBE2ZQ9H832 354 aaPredicted RBP3.02□□□□□ -1.93
SYNE2-212ENST00000554584 SCPEP1Q9HB40 452 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 SLC5A6Q9Y289 635 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 CBY1Q9Y3M2 126 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 F11RQ9Y624 299 aaKnown RBP3.02□□□□□ -1.93
SYNE2-212ENST00000554584 SOX21Q9Y651 276 aaPredicted RBP3.02□□□□□ -1.93
SYNE2-212ENST00000554584 ZNF587BE7ETH6 402 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 CCL21O00585 134 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 CYB5BO43169 146 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 CGB3P0DN86 165 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 S100A7P31151 101 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 ERVPABLB-1P60509 514 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 FAM74A4Q5TZK3 123 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 BCL7CQ8WUZ0 217 aaPredicted RBP3.01□□□□□ -1.93
SYNE2-212ENST00000554584 MUS81Q96NY9 551 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 HAPLN2Q9GZV7 340 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 THUMPD1Q9NXG2 353 aaKnown RBP3.01□□□□□ -1.93
SYNE2-212ENST00000554584 LAMP3Q9UQV4 416 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 A8MT66 165 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 CCL4P13236 92 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 LOXL3P58215 753 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 Q3ZCU0 254 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 GFI1BQ5VTD9 330 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 ZSWIM9Q86XI8 627 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 FBXO27Q8NI29 283 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 ZNF317Q96PQ6 595 aaPredicted RBP3.01□□□□□ -1.93
SYNE2-212ENST00000554584 SLA2Q9H6Q3 261 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 RIMS3Q9UJD0 308 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 COX7A2P2O60397 106 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 C1GALT1C1LP0DN25 315 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 UBL4AP11441 157 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 TCTE1Q5JU00 501 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 ADIPOR2Q86V24 386 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 OR10R2Q8NGX6 335 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 C3orf30Q96M34 536 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 TMEM218A2RU14 115 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 OR10A3P58181 314 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 TAS2R38P59533 333 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 ZNF90Q03938 601 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 RFTN1Q14699 578 aaPredicted RBP3.01□□□□□ -1.93
SYNE2-212ENST00000554584 TMEM44Q2T9K0 475 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 OR10K2Q6IF99 312 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 TMEM116Q8NCL8 245 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 GPR26Q8NDV2 337 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 FNDC9Q8TBE3 224 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 MARVELD3Q96A59 401 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 BIRC8Q96P09 236 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 HNRNPABQ99729 332 aaKnown RBP3.01□□□□□ -1.93
SYNE2-212ENST00000554584 SIX4Q9UIU6 781 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 BRCA1P38398 1863 aaKnown RBP3.01□□□□□ -1.93
SYNE2-212ENST00000554584 AQP9O43315 295 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 RASAL1O95294 804 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 HTR1EP28566 365 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 C9orf43Q8TAL5 461 aaPredicted RBP3.01□□□□□ -1.93
SYNE2-212ENST00000554584 SNAPC3Q92966 411 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 ASB9Q96DX5 294 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 PDXPQ96GD0 296 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 CNTNAP3Q9BZ76 1288 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 ZNF629Q9UEG4 869 aaPredicted RBP3.01□□□□□ -1.93
SYNE2-212ENST00000554584 ERRFI1Q9UJM3 462 aaPredicted RBP3.01□□□□□ -1.93
SYNE2-212ENST00000554584 RGPD1P0DJD0 1748 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 SLC22A20A6NK97 555 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 OR5K4A6NMS3 321 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 CDS2O95674 445 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 SNRPBP14678 240 aaKnown RBP3.01□□□□□ -1.93
SYNE2-212ENST00000554584 GPR3P46089 330 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 NCBP2-AS2Q69YL0 99 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 SFTA2Q6UW10 78 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 RBM45Q8IUH3 476 aaKnown RBP3.01□□□□□ -1.93
SYNE2-212ENST00000554584 DCUN1D3Q8IWE4 304 aa3.01□□□□□ -1.93
SYNE2-212ENST00000554584 ZNF417Q8TAU3 575 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms