RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 IL32P24001 234 aa13.1□□□□□ -0.31
PPP4R3A-201ENST00000554308 OTX2P32243 289 aa13.1□□□□□ -0.31
PPP4R3A-201ENST00000554308 PTGDSP41222 190 aa13.1□□□□□ -0.31
PPP4R3A-201ENST00000554308 ETFDHQ16134 617 aa13.1□□□□□ -0.31
PPP4R3A-201ENST00000554308 SLC35D3Q5M8T2 416 aa13.1□□□□□ -0.31
PPP4R3A-201ENST00000554308 PLA2G2CQ5R387 149 aa13.1□□□□□ -0.31
PPP4R3A-201ENST00000554308 LRRTM1Q86UE6 522 aa13.1□□□□□ -0.31
PPP4R3A-201ENST00000554308 RPS4Y2Q8TD47 263 aa13.1□□□□□ -0.31
PPP4R3A-201ENST00000554308 IMMP1LQ96LU5 166 aa13.1□□□□□ -0.31
PPP4R3A-201ENST00000554308 LDAHQ9H6V9 325 aa13.1□□□□□ -0.31
PPP4R3A-201ENST00000554308 WDR76Q9H967 626 aa13.1□□□□□ -0.31
PPP4R3A-201ENST00000554308 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.1□□□□□ -0.31
PPP4R3A-201ENST00000554308 NSG1A0A0A6YYJ2 146 aa13.1□□□□□ -0.31
PPP4R3A-201ENST00000554308 F5H5P2 479 aa13.1□□□□□ -0.31
PPP4R3A-201ENST00000554308 PLPP3O14495 311 aa13.1□□□□□ -0.31
PPP4R3A-201ENST00000554308 OR2T1O43869 369 aa13.1□□□□□ -0.31
PPP4R3A-201ENST00000554308 EFNA2O43921 213 aa13.1□□□□□ -0.31
PPP4R3A-201ENST00000554308 PLATP00750 562 aa13.1□□□□□ -0.31
PPP4R3A-201ENST00000554308 RENP00797 406 aa13.1□□□□□ -0.31
PPP4R3A-201ENST00000554308 PRKACAP17612 351 aa13.1□□□□□ -0.31
PPP4R3A-201ENST00000554308 MECP2P51608 486 aaKnown RBP13.1□□□□□ -0.31
PPP4R3A-201ENST00000554308 ZNF684Q5T5D7 378 aa13.1□□□□□ -0.31
PPP4R3A-201ENST00000554308 B3GNTL1Q67FW5 361 aaPredicted RBP13.1□□□□□ -0.31
PPP4R3A-201ENST00000554308 TIPARPQ7Z3E1 657 aaKnown RBP13.1□□□□□ -0.31
PPP4R3A-201ENST00000554308 OR51S1Q8NGJ8 323 aa13.1□□□□□ -0.31
PPP4R3A-201ENST00000554308 OR8S1Q8NH09 359 aa13.1□□□□□ -0.31
PPP4R3A-201ENST00000554308 ST8SIA1Q92185 356 aa13.1□□□□□ -0.31
PPP4R3A-201ENST00000554308 TMEM138Q9NPI0 162 aa13.1□□□□□ -0.31
PPP4R3A-201ENST00000554308 MRM2Q9UI43 246 aaKnown RBP13.1□□□□□ -0.31
PPP4R3A-201ENST00000554308 ZNF230Q9UIE0 474 aaPredicted RBP13.1□□□□□ -0.31
PPP4R3A-201ENST00000554308 UBE2QL1A1L167 161 aa13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 HMSDA8MTL9 139 aa13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 TXNDC12O95881 172 aa13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 CD1AP06126 327 aa13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 RAB40ALP0C0E4 278 aa13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 CALCRP30988 508 aa13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 APOBEC1P41238 236 aaKnown RBP13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 EMC4Q5J8M3 183 aa13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 LIPNQ5VXI9 398 aa13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 DPY19L4Q7Z388 723 aa13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 NAXDQ8IW45 347 aa13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 CDH26Q8IXH8 852 aa13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 PDZD9Q8IXQ8 264 aa13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 RAB40AQ8WXH6 277 aa13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 ST8SIA2Q92186 375 aa13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 ADAD1Q96M93 576 aaKnown RBP13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 ZNF700Q9H0M5 742 aa13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 FAM74A7A6NL05 159 aa13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 B4E171 279 aa13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 UPK3AO75631 287 aa13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 DXOO77932 396 aaKnown RBP13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 CALCBP10092 127 aa13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 ACHEP22303 614 aa13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 TSPAN7P41732 249 aa13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 RPL27P61353 136 aaKnown RBP13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 INSM1Q01101 510 aaPredicted RBP13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 FAM74A3Q4VXF1 159 aa13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 EXD3Q8N9H8 876 aa13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 OR5M9Q8NGP3 310 aa13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 OR6N2Q8NGY6 317 aa13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 TNFAIP8L1Q8WVP5 186 aa13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 STRADBQ9C0K7 418 aa13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 IFT46Q9NQC8 304 aa13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 SDHAF3Q9NRP4 125 aa13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 RPH3AQ9Y2J0 694 aaPredicted RBP13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 CHCHD2Q9Y6H1 151 aaPredicted RBP13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 LAMA5O15230 3695 aa13.09□□□□□ -0.31
PPP4R3A-201ENST00000554308 H7C417 338 aa13.08□□□□□ -0.32
PPP4R3A-201ENST00000554308 SLC16A7O60669 478 aa13.08□□□□□ -0.32
PPP4R3A-201ENST00000554308 RBBP9O75884 186 aa13.08□□□□□ -0.32
PPP4R3A-201ENST00000554308 SLC25A1P53007 311 aa13.08□□□□□ -0.32
PPP4R3A-201ENST00000554308 RBMS2Q15434 407 aaKnown RBP13.08□□□□□ -0.32
PPP4R3A-201ENST00000554308 EXT1Q16394 746 aa13.08□□□□□ -0.32
PPP4R3A-201ENST00000554308 Q499Y3 187 aa13.08□□□□□ -0.32
PPP4R3A-201ENST00000554308 C11orf88Q6PI97 169 aa13.08□□□□□ -0.32
PPP4R3A-201ENST00000554308 TMEM156Q8N614 296 aa13.08□□□□□ -0.32
PPP4R3A-201ENST00000554308 WDSUB1Q8N9V3 476 aa13.08□□□□□ -0.32
PPP4R3A-201ENST00000554308 ZNF248Q8NDW4 579 aa13.08□□□□□ -0.32
PPP4R3A-201ENST00000554308 OR51D1Q8NGF3 324 aa13.08□□□□□ -0.32
PPP4R3A-201ENST00000554308 OR5AK2Q8NH90 309 aa13.08□□□□□ -0.32
PPP4R3A-201ENST00000554308 PHYHIPQ92561 330 aa13.08□□□□□ -0.32
PPP4R3A-201ENST00000554308 SLC25A28Q96A46 364 aa13.08□□□□□ -0.32
PPP4R3A-201ENST00000554308 LOXL4Q96JB6 756 aa13.08□□□□□ -0.32
PPP4R3A-201ENST00000554308 JSRP1Q96MG2 331 aaPredicted RBP13.08□□□□□ -0.32
PPP4R3A-201ENST00000554308 GAL3ST1Q99999 423 aa13.08□□□□□ -0.32
PPP4R3A-201ENST00000554308 MTFP1Q9UDX5 166 aa13.08□□□□□ -0.32
PPP4R3A-201ENST00000554308 FTCDNL1E5RQL4 147 aa13.08□□□□□ -0.32
PPP4R3A-201ENST00000554308 DNASE2O00115 360 aaPredicted RBP13.08□□□□□ -0.32
PPP4R3A-201ENST00000554308 AKR7A3O95154 331 aa13.08□□□□□ -0.32
PPP4R3A-201ENST00000554308 HPP00738 406 aa13.08□□□□□ -0.32
PPP4R3A-201ENST00000554308 CSRP1P21291 193 aaKnown RBP13.08□□□□□ -0.32
PPP4R3A-201ENST00000554308 C6orf15Q6UXA7 325 aaPredicted RBP13.08□□□□□ -0.32
PPP4R3A-201ENST00000554308 HSD17B13Q7Z5P4 300 aaPredicted RBP13.08□□□□□ -0.32
PPP4R3A-201ENST00000554308 BOLLQ8N9W6 283 aaKnown RBP13.08□□□□□ -0.32
PPP4R3A-201ENST00000554308 DDIT4LQ96D03 193 aa13.08□□□□□ -0.32
PPP4R3A-201ENST00000554308 GNRHR2Q96P88 292 aa13.08□□□□□ -0.32
PPP4R3A-201ENST00000554308 MFFQ9GZY8 342 aa13.08□□□□□ -0.32
PPP4R3A-201ENST00000554308 RABL2AQ9UBK7 228 aaPredicted RBP13.08□□□□□ -0.32
PPP4R3A-201ENST00000554308 TCFL5Q9UL49 500 aa13.08□□□□□ -0.32
PPP4R3A-201ENST00000554308 RABL2BQ9UNT1 228 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms