RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 KLF3P57682 345 aaPredicted RBP8.59□□□□□ -1.03
SIX4-202ENST00000554079 FAM3AP98173 230 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 CYCSP99999 105 aaKnown RBP8.59□□□□□ -1.03
SIX4-202ENST00000554079 ELOCQ15369 112 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 IQCJQ1A5X6 159 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 SOHLH1Q5JUK2 328 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 METRNLQ641Q3 311 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 OR8G2PQ6IF36 304 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 FAHD2BQ6P2I3 314 aaPredicted RBP8.59□□□□□ -1.03
SIX4-202ENST00000554079 NUFIP2Q7Z417 695 aaKnown RBP8.59□□□□□ -1.03
SIX4-202ENST00000554079 SZRD1Q7Z422 152 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 TMPRSS12Q86WS5 348 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 KLHDC8AQ8IYD2 350 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 GJD3Q8N144 294 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 ZDHHC22Q8N966 263 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 LMNTD1Q8N9Z9 388 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 OR2L3Q8NG85 312 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 ZNF563Q8TA94 476 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 CASTOR1Q8WTX7 329 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 TMEM255BQ8WV15 326 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 FAHD2AQ96GK7 314 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 WFIKKN1Q96NZ8 548 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 OR2J1Q9GZK6 312 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 PARP12Q9H0J9 701 aaKnown RBP8.59□□□□□ -1.03
SIX4-202ENST00000554079 FOXD3Q9UJU5 478 aaPredicted RBP8.59□□□□□ -1.03
SIX4-202ENST00000554079 ICAM5Q9UMF0 924 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 PCDHB8Q9UN66 801 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 SRPK3Q9UPE1 567 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 NTNG1Q9Y2I2 539 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 ZNF281Q9Y2X9 895 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 A0A087WV48 116 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 A0A087WV62 115 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 SAP18O00422 153 aaKnown RBP8.59□□□□□ -1.03
SIX4-202ENST00000554079 SOCS5O75159 536 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 LCATP04180 440 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 SLC35G6P0C7Q6 338 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 TDGF1P13385 188 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 FUT1P19526 365 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 CRMP1Q14194 572 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 C1orf185Q5T7R7 199 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 P4HA3Q7Z4N8 544 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 TMEM173Q86WV6 379 aaPredicted RBP8.59□□□□□ -1.03
SIX4-202ENST00000554079 NXPE1Q8N323 547 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 OR2L13Q8N349 312 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 ARL14Q8N4G2 192 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 ZNF615Q8N8J6 731 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 SUMF2Q8NBJ7 301 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 OR51F2Q8NH61 342 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 RNF166Q96A37 237 aaPredicted RBP8.59□□□□□ -1.03
SIX4-202ENST00000554079 CNTNAP3Q9BZ76 1288 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 IL26Q9NPH9 171 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 FOXJ2Q9P0K8 574 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 SH2B3Q9UQQ2 575 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 TMED7Q9Y3B3 224 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 COL4A5P29400 1685 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 TLCD2A6NGC4 264 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 K7EPK0 472 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 NDUFS8O00217 210 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 PTGESO14684 152 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 HSD17B6O14756 317 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 DOK2O60496 412 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 SCAF4O95104 1147 aaKnown RBP8.58□□□□□ -1.04
SIX4-202ENST00000554079 DANCRP0C864 163 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 FGF5P12034 268 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 ZNF28P17035 718 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 RPS12P25398 132 aaKnown RBP8.58□□□□□ -1.04
SIX4-202ENST00000554079 GDI1P31150 447 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 GRK4P32298 578 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 DIO1P49895 249 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 RAB7AP51149 207 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 SLC25A1P53007 311 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 UBE2KP61086 200 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 MAP2K5Q13163 448 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 UPP1Q16831 310 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 FKBP1CQ5VVH2 108 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 ZNF705AQ6ZN79 300 aaPredicted RBP8.58□□□□□ -1.04
SIX4-202ENST00000554079 SLC25A26Q70HW3 274 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 GDF7Q7Z4P5 450 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 TMEM150AQ86TG1 271 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 KMT5CQ86Y97 462 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 FAM71E2Q8N5Q1 922 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 MFSD9Q8NBP5 474 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 ADAD2Q8NCV1 583 aaKnown RBP8.58□□□□□ -1.04
SIX4-202ENST00000554079 CLP1Q92989 425 aaKnown RBP8.58□□□□□ -1.04
SIX4-202ENST00000554079 BOD1Q96IK1 185 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 SLC35G5Q96KT7 338 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 PBDC1Q9BVG4 233 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 DPH1Q9BZG8 443 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 ARV1Q9H2C2 271 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 KCNK15Q9H427 330 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 DPEP2Q9H4A9 486 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 DMRT3Q9NQL9 472 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.58□□□□□ -1.04
SIX4-202ENST00000554079 AURKAIP1Q9NWT8 199 aaPredicted RBP8.58□□□□□ -1.04
SIX4-202ENST00000554079 ZNF107Q9UII5 783 aaPredicted RBP8.58□□□□□ -1.04
SIX4-202ENST00000554079 VAX2Q9UIW0 290 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 CRLS1Q9UJA2 301 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 RPH3ALQ9UNE2 315 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 TRIP12Q14669 1992 aaPredicted RBP8.58□□□□□ -1.04
SIX4-202ENST00000554079 GYPBP06028 91 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms