RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 SETD6Q8TBK2 473 aa7.62□□□□□ -1.19
TDP1-208ENST00000553989 SLC38A5Q8WUX1 472 aa7.62□□□□□ -1.19
TDP1-208ENST00000553989 KTI12Q96EK9 354 aaPredicted RBP7.62□□□□□ -1.19
TDP1-208ENST00000553989 DHRS1Q96LJ7 313 aa7.62□□□□□ -1.19
TDP1-208ENST00000553989 OXGR1Q96P68 337 aa7.62□□□□□ -1.19
TDP1-208ENST00000553989 ZNF587Q96SQ5 575 aaPredicted RBP7.62□□□□□ -1.19
TDP1-208ENST00000553989 MGLLQ99685 303 aa7.62□□□□□ -1.19
TDP1-208ENST00000553989 TEX12Q9BXU0 123 aa7.62□□□□□ -1.19
TDP1-208ENST00000553989 NUAK2Q9H093 628 aa7.62□□□□□ -1.19
TDP1-208ENST00000553989 LPAR2Q9HBW0 351 aa7.62□□□□□ -1.19
TDP1-208ENST00000553989 SLC25A19Q9HC21 320 aa7.62□□□□□ -1.19
TDP1-208ENST00000553989 BCL2L10Q9HD36 194 aa7.62□□□□□ -1.19
TDP1-208ENST00000553989 ISYNA1Q9NPH2 558 aa7.62□□□□□ -1.19
TDP1-208ENST00000553989 B3GAT2Q9NPZ5 323 aa7.62□□□□□ -1.19
TDP1-208ENST00000553989 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.62□□□□□ -1.19
TDP1-208ENST00000553989 A0A0G2JPF8 293 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 A0A1W2PRQ8 180 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 ZNF503-AS2A6NEH8 195 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 HNRNPCL2B2RXH8 293 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 B4DSR2 109 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 HNRNPCL3B7ZW38 293 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 RPL36A-HNRNPH2H7BZ11 118 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 OR2T1O43869 369 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 NPIPB7O75200 414 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 SERPINI2O75830 405 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 RGS9O75916 674 aaPredicted RBP7.61□□□□□ -1.19
TDP1-208ENST00000553989 ZNF432O94892 652 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 RAB36O95755 333 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 HLA-HP01893 362 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 SCG5P05408 212 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 HNRNPCL4P0DMR1 293 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 SAGP10523 405 aaPredicted RBP7.61□□□□□ -1.19
TDP1-208ENST00000553989 DBTP11182 482 aaKnown RBP7.61□□□□□ -1.19
TDP1-208ENST00000553989 GRPRP30550 384 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 GPR6P46095 362 aaPredicted RBP7.61□□□□□ -1.19
TDP1-208ENST00000553989 EIF2B2P49770 351 aaKnown RBP7.61□□□□□ -1.19
TDP1-208ENST00000553989 RORCP51449 518 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 DVL1P1P54792 670 aaPredicted RBP7.61□□□□□ -1.19
TDP1-208ENST00000553989 MAPK11Q15759 364 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 GSG1Q2KHT4 349 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 FAM69AQ5T7M9 428 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 TMEM236Q5W0B7 351 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 CCDC36Q8IYA8 594 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 C10orf53Q8N6V4 93 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 SCAIQ8N9R8 606 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 BBS10Q8TAM1 723 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 MRPL24Q96A35 216 aaKnown RBP7.61□□□□□ -1.19
TDP1-208ENST00000553989 CEP19Q96LK0 163 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 NIPSNAP1Q9BPW8 284 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 SYT3Q9BQG1 590 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 PTDSS2Q9BVG9 487 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 MND1Q9BWT6 205 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 CDADC1Q9BWV3 514 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 ASPNQ9BXN1 380 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 MRPL37Q9BZE1 423 aaKnown RBP7.61□□□□□ -1.19
TDP1-208ENST00000553989 POLR2J3Q9H1A7 115 aaKnown RBP7.61□□□□□ -1.19
TDP1-208ENST00000553989 NMNAT1Q9HAN9 279 aaPredicted RBP7.61□□□□□ -1.19
TDP1-208ENST00000553989 SRA1Q9HD15 236 aaKnown RBP7.61□□□□□ -1.19
TDP1-208ENST00000553989 MRPS18AQ9NVS2 196 aaKnown RBP7.61□□□□□ -1.19
TDP1-208ENST00000553989 REV1Q9UBZ9 1251 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 AASSQ9UDR5 926 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 ZNF229Q9UJW7 825 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 SSR3Q9UNL2 185 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 GRIP1Q9Y3R0 1128 aa7.61□□□□□ -1.19
TDP1-208ENST00000553989 TRAV36DV7A0A075B6V5 113 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 TMEM129A0AVI4 362 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 FTCDNL1E5RQL4 147 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 SYNGR3O43761 229 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 ADORA3P0DMS8 318 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 B4GALT1P15291 398 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 CFPP27918 469 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 ALDH3B1P43353 468 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 OR1E2P47887 323 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 GIPRP48546 466 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 RPS23P62266 143 aaKnown RBP7.6□□□□□ -1.19
TDP1-208ENST00000553989 IFITM3Q01628 133 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 POU3F1Q03052 451 aaPredicted RBP7.6□□□□□ -1.19
TDP1-208ENST00000553989 EGR4Q05215 589 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 RIN1Q13671 783 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 SPHARQ15513 63 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 NDUFA5Q16718 116 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 ALG10BQ5I7T1 473 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 C12orf73Q69YU5 71 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 C5orf46Q6UWT4 87 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 ZNF813Q6ZN06 617 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 H1FNTQ75WM6 255 aaPredicted RBP7.6□□□□□ -1.19
TDP1-208ENST00000553989 LYSMD2Q8IV50 215 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 CADM3Q8N126 398 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 PARP16Q8N5Y8 322 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 NANOGP1Q8N7R0 232 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 POC5Q8NA72 575 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 OR6N1Q8NGY5 312 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 CLDND2Q8NHS1 167 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 GNPDA2Q8TDQ7 276 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 ZNF418Q8TF45 676 aaPredicted RBP7.6□□□□□ -1.19
TDP1-208ENST00000553989 TAAR8Q969N4 342 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 TMEM186Q96B77 213 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 ZNF837Q96EG3 531 aaPredicted RBP7.6□□□□□ -1.19
TDP1-208ENST00000553989 TXNDC15Q96J42 360 aa7.6□□□□□ -1.19
TDP1-208ENST00000553989 OR2M2Q96R28 347 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms