RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 C5orf63A6NC05 138 aa11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 GJE1A6NN92 205 aa11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 CDK2AP1O14519 115 aa11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 SLC19A2O60779 497 aa11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 SLC43A1O75387 559 aa11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 PLGLB1Q02325 96 aa11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 MDS2Q8NDY4 140 aa11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 ABHD1Q96SE0 405 aa11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 C1orf198Q9H425 327 aa11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 ZCCHC4Q9H5U6 513 aa11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 MRPS7Q9Y2R9 242 aaKnown RBP11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 FLVCR1Q9Y5Y0 555 aa11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 V9GY05 133 aa11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 LOC107986453A0A1B0GWG9 222 aa11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 ZNF716A6NP11 495 aa11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 PLA2G10O15496 165 aa11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 ZNHIT1O43257 154 aa11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 IGHV3-9P01782 118 aa11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 SP1P08047 785 aa11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 RAC2P15153 192 aa11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 NPR2P20594 1047 aa11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 CCL11P51671 97 aa11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 PMP22Q01453 160 aa11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 ASCL5Q7RTU5 278 aa11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 LRRC28Q86X40 367 aaPredicted RBP11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 ASB5Q8WWX0 329 aa11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 SLC7A6Q92536 515 aa11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 TMEM54Q969K7 222 aa11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 KCTD12Q96CX2 325 aaKnown RBP11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 ALKBH3Q96Q83 286 aaPredicted RBP11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 C11orf54Q9H0W9 315 aaPredicted RBP11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 FAM206AQ9NX38 181 aa11.26□□□□□ -0.61
VIPAS39-206ENST00000553888 OR5H15A6NDH6 313 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 TM4SF5O14894 197 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 CCR9P51686 369 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 AGAP7PQ5VUJ5 663 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 FCRLAQ7L513 359 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 LINGO2Q7L985 606 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 NAA40Q86UY6 237 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 GDPD1Q8N9F7 314 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 PLPP7Q8NBV4 271 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 OR51A2Q8NGJ7 313 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 AGAP4Q96P64 663 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 ZNF552Q9H707 407 aaPredicted RBP11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 PNRC2Q9NPJ4 139 aaKnown RBP11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 DDX28Q9NUL7 540 aaKnown RBP11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 TAS2R4Q9NYW5 299 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 A6NJY4 79 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 LIPCP11150 499 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 SDHBP21912 280 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 LHX2P50458 406 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 GALK2Q01415 458 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 POU4F3Q15319 338 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 TMEM95Q3KNT9 176 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 RNFT1Q5M7Z0 435 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 PRSS45Q7RTY3 260 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 OR2AJ1Q8NGZ0 328 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 NABP1Q96AH0 204 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 IP6K3Q96PC2 410 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 MMP28Q9H239 520 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 SP140LQ9H930 580 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 ZNF319Q9P2F9 582 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 FOXD3Q9UJU5 478 aaPredicted RBP11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 DHDHQ9UQ10 334 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 SVILO95425 2214 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 HSPB2A8KAH6 182 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 E9PLN8 166 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 AIPO00170 330 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 TLX3O43711 291 aaPredicted RBP11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 WISP2O76076 250 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 VAMP5O95183 116 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 PTTG1O95997 202 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 TTRP02766 147 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 TMIGD3P0DMS9 266 aaPredicted RBP11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 PTHLHP12272 177 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 MAPK3P27361 379 aaPredicted RBP11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 DEFA1P59665 94 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 DEFA3P59666 94 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 ARG2P78540 354 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 HSPB2Q16082 182 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 BCL2L15Q5TBC7 163 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 SLC25A25Q6KCM7 469 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 HDDC2Q7Z4H3 204 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 CMTM4Q8IZR5 234 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 FDCSPQ8NFU4 85 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 SLC25A38Q96DW6 304 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 ULBP2Q9BZM5 246 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 DEFB127Q9H1M4 99 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 OR5V1Q9UGF6 321 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 ADAM30Q9UKF2 790 aa11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 PCDHGA9Q9Y5G4 932 aaKnown RBP11.25□□□□□ -0.61
VIPAS39-206ENST00000553888 ATMQ13315 3056 aa11.24□□□□□ -0.61
VIPAS39-206ENST00000553888 ANXA2P2A6NMY6 339 aa11.24□□□□□ -0.61
VIPAS39-206ENST00000553888 NME2P1O60361 137 aa11.24□□□□□ -0.61
VIPAS39-206ENST00000553888 ANXA2P07355 339 aaKnown RBP11.24□□□□□ -0.61
VIPAS39-206ENST00000553888 PATE4P0C8F1 98 aa11.24□□□□□ -0.61
VIPAS39-206ENST00000553888 NME2P22392 152 aa11.24□□□□□ -0.61
VIPAS39-206ENST00000553888 CLDN18P56856 261 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms