RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 NTF4P34130 210 aa12.67□□□□□ -0.38
SHMT2-208ENST00000553868 OR3A2P47893 321 aa12.67□□□□□ -0.38
SHMT2-208ENST00000553868 SH3BGRP55822 239 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-208ENST00000553868 ROM1Q03395 351 aa12.67□□□□□ -0.38
SHMT2-208ENST00000553868 GPR50Q13585 617 aa12.67□□□□□ -0.38
SHMT2-208ENST00000553868 TPBGQ13641 420 aa12.67□□□□□ -0.38
SHMT2-208ENST00000553868 TSTQ16762 297 aaKnown RBP12.67□□□□□ -0.38
SHMT2-208ENST00000553868 MEP1BQ16820 701 aa12.67□□□□□ -0.38
SHMT2-208ENST00000553868 CEACAM16Q2WEN9 425 aa12.67□□□□□ -0.38
SHMT2-208ENST00000553868 CCDC58Q4VC31 144 aa12.67□□□□□ -0.38
SHMT2-208ENST00000553868 TSPO2Q5TGU0 170 aa12.67□□□□□ -0.38
SHMT2-208ENST00000553868 DEGS2Q6QHC5 323 aa12.67□□□□□ -0.38
SHMT2-208ENST00000553868 PLXDC2Q6UX71 529 aa12.67□□□□□ -0.38
SHMT2-208ENST00000553868 SSX6Q7RTT6 188 aa12.67□□□□□ -0.38
SHMT2-208ENST00000553868 NUFIP2Q7Z417 695 aaKnown RBP12.67□□□□□ -0.38
SHMT2-208ENST00000553868 KRT77Q7Z794 578 aa12.67□□□□□ -0.38
SHMT2-208ENST00000553868 KLBQ86Z14 1044 aa12.67□□□□□ -0.38
SHMT2-208ENST00000553868 UBE2J2Q8N2K1 259 aa12.67□□□□□ -0.38
SHMT2-208ENST00000553868 OR6K3Q8NGY3 331 aa12.67□□□□□ -0.38
SHMT2-208ENST00000553868 OR52N5Q8NH56 324 aa12.67□□□□□ -0.38
SHMT2-208ENST00000553868 RAB2BQ8WUD1 216 aa12.67□□□□□ -0.38
SHMT2-208ENST00000553868 YIPF6Q96EC8 236 aa12.67□□□□□ -0.38
SHMT2-208ENST00000553868 OPALINQ96PE5 141 aa12.67□□□□□ -0.38
SHMT2-208ENST00000553868 ALKBH3Q96Q83 286 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-208ENST00000553868 OR8B4Q96RC9 309 aa12.67□□□□□ -0.38
SHMT2-208ENST00000553868 FOXB1Q99853 325 aa12.67□□□□□ -0.38
SHMT2-208ENST00000553868 FUNDC2Q9BWH2 189 aa12.67□□□□□ -0.38
SHMT2-208ENST00000553868 MROQ9BYG7 248 aa12.67□□□□□ -0.38
SHMT2-208ENST00000553868 KCNN2Q9H2S1 579 aa12.67□□□□□ -0.38
SHMT2-208ENST00000553868 SIAEQ9HAT2 523 aa12.67□□□□□ -0.38
SHMT2-208ENST00000553868 SLC7A10Q9NS82 523 aa12.67□□□□□ -0.38
SHMT2-208ENST00000553868 TMEM38BQ9NVV0 291 aa12.67□□□□□ -0.38
SHMT2-208ENST00000553868 RSL24D1Q9UHA3 163 aaKnown RBP12.67□□□□□ -0.38
SHMT2-208ENST00000553868 CEPT1Q9Y6K0 416 aa12.67□□□□□ -0.38
SHMT2-208ENST00000553868 ZNF407Q9C0G0 2248 aa12.66□□□□□ -0.38
SHMT2-208ENST00000553868 H3BSA7 217 aa12.66□□□□□ -0.38
SHMT2-208ENST00000553868 CNOT4O95628 575 aaKnown RBP12.66□□□□□ -0.38
SHMT2-208ENST00000553868 F12P00748 615 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-208ENST00000553868 IL2RAP01589 272 aa12.66□□□□□ -0.38
SHMT2-208ENST00000553868 CD53P19397 219 aa12.66□□□□□ -0.38
SHMT2-208ENST00000553868 CDAP32320 146 aa12.66□□□□□ -0.38
SHMT2-208ENST00000553868 TIMP3P35625 211 aa12.66□□□□□ -0.38
SHMT2-208ENST00000553868 OR12D2P58182 307 aa12.66□□□□□ -0.38
SHMT2-208ENST00000553868 PCBD1P61457 104 aa12.66□□□□□ -0.38
SHMT2-208ENST00000553868 AQP6Q13520 282 aa12.66□□□□□ -0.38
SHMT2-208ENST00000553868 GUSBP1Q15486 140 aa12.66□□□□□ -0.38
SHMT2-208ENST00000553868 TP53I3Q53FA7 332 aa12.66□□□□□ -0.38
SHMT2-208ENST00000553868 FAM27BQ5VT28 67 aa12.66□□□□□ -0.38
SHMT2-208ENST00000553868 FBXW9Q5XUX1 488 aa12.66□□□□□ -0.38
SHMT2-208ENST00000553868 RHOUQ7L0Q8 258 aa12.66□□□□□ -0.38
SHMT2-208ENST00000553868 DCXRQ7Z4W1 244 aa12.66□□□□□ -0.38
SHMT2-208ENST00000553868 ANKRD13BQ86YJ7 626 aa12.66□□□□□ -0.38
SHMT2-208ENST00000553868 ZNF679Q8IYX0 411 aa12.66□□□□□ -0.38
SHMT2-208ENST00000553868 YIPF7Q8N8F6 280 aa12.66□□□□□ -0.38
SHMT2-208ENST00000553868 C9orf106Q8NAJ2 232 aa12.66□□□□□ -0.38
SHMT2-208ENST00000553868 ABHD6Q9BV23 337 aa12.66□□□□□ -0.38
SHMT2-208ENST00000553868 RBM38Q9H0Z9 239 aaKnown RBP12.66□□□□□ -0.38
SHMT2-208ENST00000553868 PLEKHF2Q9H8W4 249 aa12.66□□□□□ -0.38
SHMT2-208ENST00000553868 ISG20L2Q9H9L3 353 aaKnown RBP12.66□□□□□ -0.38
SHMT2-208ENST00000553868 EMC7Q9NPA0 242 aa12.66□□□□□ -0.38
SHMT2-208ENST00000553868 CYB5R1Q9UHQ9 305 aa12.66□□□□□ -0.38
SHMT2-208ENST00000553868 KLHDC2Q9Y2U9 406 aa12.66□□□□□ -0.38
SHMT2-208ENST00000553868 CST2P09228 141 aa12.65□□□□□ -0.38
SHMT2-208ENST00000553868 OR8G3PP0DMU2 310 aa12.65□□□□□ -0.38
SHMT2-208ENST00000553868 PSMA1P25786 263 aaKnown RBP12.65□□□□□ -0.38
SHMT2-208ENST00000553868 LIPAP38571 399 aa12.65□□□□□ -0.38
SHMT2-208ENST00000553868 CD79BP40259 229 aa12.65□□□□□ -0.38
SHMT2-208ENST00000553868 RPS27P42677 84 aaKnown RBP12.65□□□□□ -0.38
SHMT2-208ENST00000553868 TGM4P49221 684 aa12.65□□□□□ -0.38
SHMT2-208ENST00000553868 RIDAP52758 137 aaKnown RBP12.65□□□□□ -0.38
SHMT2-208ENST00000553868 SIRPAP78324 504 aa12.65□□□□□ -0.38
SHMT2-208ENST00000553868 TRAM1Q15629 374 aa12.65□□□□□ -0.38
SHMT2-208ENST00000553868 ZNF684Q5T5D7 378 aa12.65□□□□□ -0.38
SHMT2-208ENST00000553868 RPL22L1Q6P5R6 122 aaKnown RBP12.65□□□□□ -0.38
SHMT2-208ENST00000553868 SYT9Q86SS6 491 aa12.65□□□□□ -0.38
SHMT2-208ENST00000553868 CXorf67Q86X51 503 aaPredicted RBP12.65□□□□□ -0.38
SHMT2-208ENST00000553868 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.65□□□□□ -0.38
SHMT2-208ENST00000553868 RFLNBQ8N5W9 214 aa12.65□□□□□ -0.38
SHMT2-208ENST00000553868 CNEP1R1Q8N9A8 125 aa12.65□□□□□ -0.38
SHMT2-208ENST00000553868 GJC3Q8NFK1 279 aa12.65□□□□□ -0.38
SHMT2-208ENST00000553868 TMEM158Q8WZ71 300 aa12.65□□□□□ -0.38
SHMT2-208ENST00000553868 NABP1Q96AH0 204 aa12.65□□□□□ -0.38
SHMT2-208ENST00000553868 PELI1Q96FA3 418 aa12.65□□□□□ -0.38
SHMT2-208ENST00000553868 TTTY10Q9BZA0 68 aa12.65□□□□□ -0.38
SHMT2-208ENST00000553868 C12orf49Q9H741 205 aa12.65□□□□□ -0.38
SHMT2-208ENST00000553868 NDUFB11Q9NX14 153 aa12.65□□□□□ -0.38
SHMT2-208ENST00000553868 MALT1Q9UDY8 824 aa12.65□□□□□ -0.38
SHMT2-208ENST00000553868 ENPP5Q9UJA9 477 aa12.65□□□□□ -0.38
SHMT2-208ENST00000553868 GDF2Q9UK05 429 aaPredicted RBP12.65□□□□□ -0.38
SHMT2-208ENST00000553868 ZNF878C9JN71 531 aa12.64□□□□□ -0.39
SHMT2-208ENST00000553868 GABARAPO95166 117 aa12.64□□□□□ -0.39
SHMT2-208ENST00000553868 IGHV3-9P01782 118 aa12.64□□□□□ -0.39
SHMT2-208ENST00000553868 H2BFMP0C1H6 154 aa12.64□□□□□ -0.39
SHMT2-208ENST00000553868 TMIGD3P0DMS9 266 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-208ENST00000553868 MPGP29372 298 aa12.64□□□□□ -0.39
SHMT2-208ENST00000553868 GABRA5P31644 462 aa12.64□□□□□ -0.39
SHMT2-208ENST00000553868 TGFBR2P37173 567 aa12.64□□□□□ -0.39
SHMT2-208ENST00000553868 TGFBR3Q03167 851 aa12.64□□□□□ -0.39
SHMT2-208ENST00000553868 SCRN3Q0VDG4 424 aa12.64□□□□□ -0.39
SHMT2-208ENST00000553868 FAPQ12884 760 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms