RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 ADAM30Q9UKF2 790 aa14.07□□□□□ -0.16
ACTN1-209ENST00000553659 EMC9Q9Y3B6 208 aa14.07□□□□□ -0.16
ACTN1-209ENST00000553659 DNHD1Q96M86 4753 aa14.07□□□□□ -0.16
ACTN1-209ENST00000553659 PRSS37A4D1T9 235 aa14.06□□□□□ -0.16
ACTN1-209ENST00000553659 TMEM127O75204 238 aa14.06□□□□□ -0.16
ACTN1-209ENST00000553659 SERPINI2O75830 405 aa14.06□□□□□ -0.16
ACTN1-209ENST00000553659 GATBO75879 557 aaKnown RBP14.06□□□□□ -0.16
ACTN1-209ENST00000553659 SULT1C4O75897 302 aa14.06□□□□□ -0.16
ACTN1-209ENST00000553659 AHCYP23526 432 aa14.06□□□□□ -0.16
ACTN1-209ENST00000553659 PYCR1P32322 319 aa14.06□□□□□ -0.16
ACTN1-209ENST00000553659 SDC2P34741 201 aa14.06□□□□□ -0.16
ACTN1-209ENST00000553659 NAA10P41227 235 aaPredicted RBP14.06□□□□□ -0.16
ACTN1-209ENST00000553659 EGR3Q06889 387 aa14.06□□□□□ -0.16
ACTN1-209ENST00000553659 CDK5R1Q15078 307 aa14.06□□□□□ -0.16
ACTN1-209ENST00000553659 DDI2Q5TDH0 399 aa14.06□□□□□ -0.16
ACTN1-209ENST00000553659 ARL9Q6T311 187 aa14.06□□□□□ -0.16
ACTN1-209ENST00000553659 STAC2Q6ZMT1 411 aa14.06□□□□□ -0.16
ACTN1-209ENST00000553659 ZNF704Q6ZNC4 412 aaPredicted RBP14.06□□□□□ -0.16
ACTN1-209ENST00000553659 CCDC190Q86UF4 302 aa14.06□□□□□ -0.16
ACTN1-209ENST00000553659 ASB17Q8WXJ9 295 aa14.06□□□□□ -0.16
ACTN1-209ENST00000553659 THRSPQ92748 146 aa14.06□□□□□ -0.16
ACTN1-209ENST00000553659 KCTD12Q96CX2 325 aaKnown RBP14.06□□□□□ -0.16
ACTN1-209ENST00000553659 GMPPAQ96IJ6 420 aaPredicted RBP14.06□□□□□ -0.16
ACTN1-209ENST00000553659 INTS14Q96SY0 518 aa14.06□□□□□ -0.16
ACTN1-209ENST00000553659 SLC30A2Q9BRI3 323 aa14.06□□□□□ -0.16
ACTN1-209ENST00000553659 PAQR5Q9NXK6 330 aaPredicted RBP14.06□□□□□ -0.16
ACTN1-209ENST00000553659 VDAC3Q9Y277 283 aa14.06□□□□□ -0.16
ACTN1-209ENST00000553659 HDGFL3Q9Y3E1 203 aa14.06□□□□□ -0.16
ACTN1-209ENST00000553659 CMAHPQ9Y471 501 aa14.06□□□□□ -0.16
ACTN1-209ENST00000553659 LIPT2A6NK58 231 aa14.05□□□□□ -0.16
ACTN1-209ENST00000553659 SHISA8B8ZZ34 492 aa14.05□□□□□ -0.16
ACTN1-209ENST00000553659 C11orf98E9PRG8 122 aa14.05□□□□□ -0.16
ACTN1-209ENST00000553659 EIF1AYO14602 144 aaKnown RBP14.05□□□□□ -0.16
ACTN1-209ENST00000553659 ARL6IP5O75915 188 aa14.05□□□□□ -0.16
ACTN1-209ENST00000553659 PLGP00747 810 aaPredicted RBP14.05□□□□□ -0.16
ACTN1-209ENST00000553659 PLAUP00749 431 aa14.05□□□□□ -0.16
ACTN1-209ENST00000553659 TFPIP10646 304 aa14.05□□□□□ -0.16
ACTN1-209ENST00000553659 EIF1AXP47813 144 aaKnown RBP14.05□□□□□ -0.16
ACTN1-209ENST00000553659 OR12D2P58182 307 aa14.05□□□□□ -0.16
ACTN1-209ENST00000553659 PPP3R1P63098 170 aa14.05□□□□□ -0.16
ACTN1-209ENST00000553659 HNRNPA0Q13151 305 aaKnown RBP14.05□□□□□ -0.16
ACTN1-209ENST00000553659 ZNF239Q16600 458 aaKnown RBP14.05□□□□□ -0.16
ACTN1-209ENST00000553659 ZNF544Q6NX49 715 aa14.05□□□□□ -0.16
ACTN1-209ENST00000553659 Q6ZNX1 250 aa14.05□□□□□ -0.16
ACTN1-209ENST00000553659 BEND4Q6ZU67 534 aa14.05□□□□□ -0.16
ACTN1-209ENST00000553659 PXKQ7Z7A4 578 aa14.05□□□□□ -0.16
ACTN1-209ENST00000553659 TIGD4Q8IY51 512 aa14.05□□□□□ -0.16
ACTN1-209ENST00000553659 ZNF611Q8N823 705 aa14.05□□□□□ -0.16
ACTN1-209ENST00000553659 SPATA3Q8NHX4 192 aa14.05□□□□□ -0.16
ACTN1-209ENST00000553659 WDR76Q9H967 626 aa14.05□□□□□ -0.16
ACTN1-209ENST00000553659 GLRX2Q9NS18 164 aa14.05□□□□□ -0.16
ACTN1-209ENST00000553659 TRAPPC4Q9Y296 219 aa14.05□□□□□ -0.16
ACTN1-209ENST00000553659 FREM1Q5H8C1 2179 aa14.05□□□□□ -0.16
ACTN1-209ENST00000553659 HS3ST1O14792 307 aa14.04□□□□□ -0.16
ACTN1-209ENST00000553659 SELENOFO60613 162 aa14.04□□□□□ -0.16
ACTN1-209ENST00000553659 SS18L1O75177 396 aaPredicted RBP14.04□□□□□ -0.16
ACTN1-209ENST00000553659 UPK1BO75841 260 aa14.04□□□□□ -0.16
ACTN1-209ENST00000553659 KRT8P05787 483 aa14.04□□□□□ -0.16
ACTN1-209ENST00000553659 ZNF17P17021 662 aa14.04□□□□□ -0.16
ACTN1-209ENST00000553659 PTBP1P26599 531 aaKnown RBP eCLIP14.04□□□□□ -0.16
ACTN1-209ENST00000553659 ATP5J2P56134 94 aa14.04□□□□□ -0.16
ACTN1-209ENST00000553659 OR7A5Q15622 319 aa14.04□□□□□ -0.16
ACTN1-209ENST00000553659 GTPBP8Q8N3Z3 284 aaPredicted RBP14.04□□□□□ -0.16
ACTN1-209ENST00000553659 PARP16Q8N5Y8 322 aa14.04□□□□□ -0.16
ACTN1-209ENST00000553659 ZNF454Q8N9F8 522 aa14.04□□□□□ -0.16
ACTN1-209ENST00000553659 OR51L1Q8NGJ5 315 aa14.04□□□□□ -0.16
ACTN1-209ENST00000553659 OR10D3Q8NH80 312 aa14.04□□□□□ -0.16
ACTN1-209ENST00000553659 ABHD4Q8TB40 342 aa14.04□□□□□ -0.16
ACTN1-209ENST00000553659 PPP1R14BQ96C90 147 aa14.04□□□□□ -0.16
ACTN1-209ENST00000553659 PLPPR2Q96GM1 343 aa14.04□□□□□ -0.16
ACTN1-209ENST00000553659 PGLYRP3Q96LB9 341 aa14.04□□□□□ -0.16
ACTN1-209ENST00000553659 ADAD1Q96M93 576 aaKnown RBP14.04□□□□□ -0.16
ACTN1-209ENST00000553659 KCNS3Q9BQ31 491 aa14.04□□□□□ -0.16
ACTN1-209ENST00000553659 TMEM204Q9BSN7 226 aa14.04□□□□□ -0.16
ACTN1-209ENST00000553659 HDHD5Q9BXW7 423 aa14.04□□□□□ -0.16
ACTN1-209ENST00000553659 BARHL1Q9BZE3 327 aa14.04□□□□□ -0.16
ACTN1-209ENST00000553659 OR11A1Q9GZK7 315 aa14.04□□□□□ -0.16
ACTN1-209ENST00000553659 OR10A4Q9H209 315 aa14.04□□□□□ -0.16
ACTN1-209ENST00000553659 SYT4Q9H2B2 425 aa14.04□□□□□ -0.16
ACTN1-209ENST00000553659 LAMP5Q9UJQ1 280 aa14.04□□□□□ -0.16
ACTN1-209ENST00000553659 GNG8Q9UK08 70 aa14.04□□□□□ -0.16
ACTN1-209ENST00000553659 MCTS1Q9ULC4 181 aaKnown RBP14.04□□□□□ -0.16
ACTN1-209ENST00000553659 CLEC4AQ9UMR7 237 aa14.04□□□□□ -0.16
ACTN1-209ENST00000553659 B9D1Q9UPM9 204 aa14.04□□□□□ -0.16
ACTN1-209ENST00000553659 ANKRD61A6NGH8 418 aa14.03□□□□□ -0.16
ACTN1-209ENST00000553659 RGS5O15539 181 aa14.03□□□□□ -0.16
ACTN1-209ENST00000553659 SC5DO75845 299 aa14.03□□□□□ -0.16
ACTN1-209ENST00000553659 ZNF432O94892 652 aa14.03□□□□□ -0.16
ACTN1-209ENST00000553659 NR2C1P13056 603 aa14.03□□□□□ -0.16
ACTN1-209ENST00000553659 EDNRAP25101 427 aa14.03□□□□□ -0.16
ACTN1-209ENST00000553659 GDI2P50395 445 aaKnown RBP14.03□□□□□ -0.16
ACTN1-209ENST00000553659 DEFA1P59665 94 aa14.03□□□□□ -0.16
ACTN1-209ENST00000553659 DEFA3P59666 94 aa14.03□□□□□ -0.16
ACTN1-209ENST00000553659 SLC3A1Q07837 685 aa14.03□□□□□ -0.16
ACTN1-209ENST00000553659 TNK1Q13470 666 aa14.03□□□□□ -0.16
ACTN1-209ENST00000553659 TP53I3Q53FA7 332 aa14.03□□□□□ -0.16
ACTN1-209ENST00000553659 METAP1DQ6UB28 335 aaPredicted RBP14.03□□□□□ -0.16
ACTN1-209ENST00000553659 TMEM91Q6ZNR0 172 aa14.03□□□□□ -0.16
ACTN1-209ENST00000553659 SSX6Q7RTT6 188 aa14.03□□□□□ -0.16
ACTN1-209ENST00000553659 WFDC8Q8IUA0 241 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms