RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 NTN4Q9HB63 628 aa10.77□□□□□ -0.69
LINC00643-202ENST00000553426 WNK2Q9Y3S1 2297 aa10.77□□□□□ -0.69
LINC00643-202ENST00000553426 LRRC30A6NM36 301 aa10.76□□□□□ -0.69
LINC00643-202ENST00000553426 IMPA2O14732 288 aa10.76□□□□□ -0.69
LINC00643-202ENST00000553426 OR10H3O60404 316 aa10.76□□□□□ -0.69
LINC00643-202ENST00000553426 DIRAS1O95057 198 aa10.76□□□□□ -0.69
LINC00643-202ENST00000553426 GADD45GO95257 159 aa10.76□□□□□ -0.69
LINC00643-202ENST00000553426 CFPP27918 469 aa10.76□□□□□ -0.69
LINC00643-202ENST00000553426 SLC6A6P31641 620 aa10.76□□□□□ -0.69
LINC00643-202ENST00000553426 SRP9P49458 86 aaKnown RBP10.76□□□□□ -0.69
LINC00643-202ENST00000553426 SPIBQ01892 262 aa10.76□□□□□ -0.69
LINC00643-202ENST00000553426 SEC23BQ15437 767 aa10.76□□□□□ -0.69
LINC00643-202ENST00000553426 RFX4Q33E94 735 aa10.76□□□□□ -0.69
LINC00643-202ENST00000553426 SLC36A3Q495N2 470 aa10.76□□□□□ -0.69
LINC00643-202ENST00000553426 CCDC92Q53HC0 331 aaPredicted RBP10.76□□□□□ -0.69
LINC00643-202ENST00000553426 ESCO2Q56NI9 601 aa10.76□□□□□ -0.69
LINC00643-202ENST00000553426 SPRNQ5BIV9 151 aa10.76□□□□□ -0.69
LINC00643-202ENST00000553426 ARMCX4Q5H9R4 360 aa10.76□□□□□ -0.69
LINC00643-202ENST00000553426 LEG1Q6P5S2 330 aa10.76□□□□□ -0.69
LINC00643-202ENST00000553426 PTCHD4Q6ZW05 846 aa10.76□□□□□ -0.69
LINC00643-202ENST00000553426 TSEN54Q7Z6J9 526 aaKnown RBP10.76□□□□□ -0.69
LINC00643-202ENST00000553426 LRRC28Q86X40 367 aaPredicted RBP10.76□□□□□ -0.69
LINC00643-202ENST00000553426 OR5AS1Q8N127 324 aa10.76□□□□□ -0.69
LINC00643-202ENST00000553426 RNF148Q8N7C7 305 aa10.76□□□□□ -0.69
LINC00643-202ENST00000553426 C3orf56Q8N813 242 aa10.76□□□□□ -0.69
LINC00643-202ENST00000553426 OR2AJ1Q8NGZ0 328 aa10.76□□□□□ -0.69
LINC00643-202ENST00000553426 FANK1Q8TC84 345 aa10.76□□□□□ -0.69
LINC00643-202ENST00000553426 POP5Q969H6 163 aaKnown RBP10.76□□□□□ -0.69
LINC00643-202ENST00000553426 PYURFQ96I23 114 aa10.76□□□□□ -0.69
LINC00643-202ENST00000553426 C7orf34Q96L11 122 aa10.76□□□□□ -0.69
LINC00643-202ENST00000553426 COQ7Q99807 217 aa10.76□□□□□ -0.69
LINC00643-202ENST00000553426 SLC6A7Q99884 636 aa10.76□□□□□ -0.69
LINC00643-202ENST00000553426 IFT27Q9BW83 186 aa10.76□□□□□ -0.69
LINC00643-202ENST00000553426 FAM107BQ9H098 131 aa10.76□□□□□ -0.69
LINC00643-202ENST00000553426 POFUT1Q9H488 388 aa10.76□□□□□ -0.69
LINC00643-202ENST00000553426 GORASP2Q9H8Y8 452 aa10.76□□□□□ -0.69
LINC00643-202ENST00000553426 PATZ1Q9HBE1 687 aaKnown RBP10.76□□□□□ -0.69
LINC00643-202ENST00000553426 PTTG3PQ9NZH4 202 aa10.76□□□□□ -0.69
LINC00643-202ENST00000553426 MAGEL2Q9UJ55 1249 aa10.76□□□□□ -0.69
LINC00643-202ENST00000553426 TMCC3Q9ULS5 477 aa10.76□□□□□ -0.69
LINC00643-202ENST00000553426 V9GYQ6 96 aa10.76□□□□□ -0.69
LINC00643-202ENST00000553426 PPP1R3DO95685 299 aa10.75□□□□□ -0.69
LINC00643-202ENST00000553426 DBHP09172 617 aa10.75□□□□□ -0.69
LINC00643-202ENST00000553426 SELEP16581 610 aa10.75□□□□□ -0.69
LINC00643-202ENST00000553426 CPT2P23786 658 aa10.75□□□□□ -0.69
LINC00643-202ENST00000553426 CDKN2AP42771 156 aaKnown RBP10.75□□□□□ -0.69
LINC00643-202ENST00000553426 ECH1Q13011 328 aa10.75□□□□□ -0.69
LINC00643-202ENST00000553426 HLXQ14774 488 aaPredicted RBP10.75□□□□□ -0.69
LINC00643-202ENST00000553426 SAMD4BQ5PRF9 694 aaKnown RBP10.75□□□□□ -0.69
LINC00643-202ENST00000553426 OTPQ5XKR4 325 aa10.75□□□□□ -0.69
LINC00643-202ENST00000553426 OR2T2Q6IF00 324 aa10.75□□□□□ -0.69
LINC00643-202ENST00000553426 FBXW12Q6X9E4 464 aa10.75□□□□□ -0.69
LINC00643-202ENST00000553426 Q6ZR03 302 aa10.75□□□□□ -0.69
LINC00643-202ENST00000553426 CPLX4Q7Z7G2 160 aa10.75□□□□□ -0.69
LINC00643-202ENST00000553426 OR8G5Q8NG78 346 aa10.75□□□□□ -0.69
LINC00643-202ENST00000553426 ZMYND19Q96E35 227 aaPredicted RBP10.75□□□□□ -0.69
LINC00643-202ENST00000553426 NSMCE2Q96MF7 247 aa10.75□□□□□ -0.69
LINC00643-202ENST00000553426 MRI1Q9BV20 369 aa10.75□□□□□ -0.69
LINC00643-202ENST00000553426 HCAR1Q9BXC0 346 aa10.75□□□□□ -0.69
LINC00643-202ENST00000553426 MYLK2Q9H1R3 596 aa10.75□□□□□ -0.69
LINC00643-202ENST00000553426 OR52D1Q9H346 318 aa10.75□□□□□ -0.69
LINC00643-202ENST00000553426 SRA1Q9HD15 236 aaKnown RBP10.75□□□□□ -0.69
LINC00643-202ENST00000553426 GCM1Q9NP62 436 aa10.75□□□□□ -0.69
LINC00643-202ENST00000553426 DDX28Q9NUL7 540 aaKnown RBP10.75□□□□□ -0.69
LINC00643-202ENST00000553426 OR5V1Q9UGF6 321 aa10.75□□□□□ -0.69
LINC00643-202ENST00000553426 B9D1Q9UPM9 204 aa10.75□□□□□ -0.69
LINC00643-202ENST00000553426 AUP1Q9Y679 476 aa10.75□□□□□ -0.69
LINC00643-202ENST00000553426 ARPC3O15145 178 aa10.74□□□□□ -0.69
LINC00643-202ENST00000553426 IDH3BO43837 385 aa10.74□□□□□ -0.69
LINC00643-202ENST00000553426 HLA-DQA2P01906 255 aa10.74□□□□□ -0.69
LINC00643-202ENST00000553426 FABP3P05413 133 aa10.74□□□□□ -0.69
LINC00643-202ENST00000553426 FPR3P25089 353 aa10.74□□□□□ -0.69
LINC00643-202ENST00000553426 ZFP36P26651 326 aaKnown RBP10.74□□□□□ -0.69
LINC00643-202ENST00000553426 SLC6A9P48067 706 aa10.74□□□□□ -0.69
LINC00643-202ENST00000553426 COMPP49747 757 aaPredicted RBP10.74□□□□□ -0.69
LINC00643-202ENST00000553426 FXYD6P3P58550 94 aa10.74□□□□□ -0.69
LINC00643-202ENST00000553426 COX10Q12887 443 aa10.74□□□□□ -0.69
LINC00643-202ENST00000553426 MALLQ13021 153 aa10.74□□□□□ -0.69
LINC00643-202ENST00000553426 ZNF154Q13106 437 aa10.74□□□□□ -0.69
LINC00643-202ENST00000553426 ZMYND11Q15326 602 aa10.74□□□□□ -0.69
LINC00643-202ENST00000553426 MEP1BQ16820 701 aa10.74□□□□□ -0.69
LINC00643-202ENST00000553426 C1orf87Q8N0U7 546 aa10.74□□□□□ -0.69
LINC00643-202ENST00000553426 OR10AD1Q8NGE0 317 aa10.74□□□□□ -0.69
LINC00643-202ENST00000553426 OR4K13Q8NH42 304 aa10.74□□□□□ -0.69
LINC00643-202ENST00000553426 DHRS1Q96LJ7 313 aa10.74□□□□□ -0.69
LINC00643-202ENST00000553426 TSSK2Q96PF2 358 aa10.74□□□□□ -0.69
LINC00643-202ENST00000553426 NMNAT3Q96T66 252 aa10.74□□□□□ -0.69
LINC00643-202ENST00000553426 PITX2Q99697 317 aa10.74□□□□□ -0.69
LINC00643-202ENST00000553426 GPA33Q99795 319 aa10.74□□□□□ -0.69
LINC00643-202ENST00000553426 RPRD1BQ9NQG5 326 aaKnown RBP10.74□□□□□ -0.69
LINC00643-202ENST00000553426 TMEM100Q9NV29 134 aa10.74□□□□□ -0.69
LINC00643-202ENST00000553426 DCAF16Q9NXF7 216 aa10.74□□□□□ -0.69
LINC00643-202ENST00000553426 NDE1Q9NXR1 346 aa10.74□□□□□ -0.69
LINC00643-202ENST00000553426 OPN4Q9UHM6 478 aa10.74□□□□□ -0.69
LINC00643-202ENST00000553426 POLR3KQ9Y2Y1 108 aaPredicted RBP10.74□□□□□ -0.69
LINC00643-202ENST00000553426 LHFPL6Q9Y693 200 aa10.74□□□□□ -0.69
LINC00643-202ENST00000553426 DYSFO75923 2080 aa10.73□□□□□ -0.69
LINC00643-202ENST00000553426 TMEM89A2RUT3 159 aa10.73□□□□□ -0.69
LINC00643-202ENST00000553426 F5H5K5 113 aa10.73□□□□□ -0.69
LINC00643-202ENST00000553426 TMEM178BH3BS89 294 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms