RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 PRSS12P56730 875 aa7.54□□□□□ -1.2
SYNE2-209ENST00000553308 BPIFB3P59826 476 aa7.54□□□□□ -1.2
SYNE2-209ENST00000553308 RPL15P61313 204 aaKnown RBP7.54□□□□□ -1.2
SYNE2-209ENST00000553308 MAGOHP61326 146 aaKnown RBP7.54□□□□□ -1.2
SYNE2-209ENST00000553308 HOXA4Q00056 320 aaPredicted RBP7.54□□□□□ -1.2
SYNE2-209ENST00000553308 ZNF181Q2M3W8 571 aa7.54□□□□□ -1.2
SYNE2-209ENST00000553308 VMACQ2NL98 169 aa7.54□□□□□ -1.2
SYNE2-209ENST00000553308 FBLN7Q53RD9 439 aa7.54□□□□□ -1.2
SYNE2-209ENST00000553308 TTMPQ5BVD1 217 aa7.54□□□□□ -1.2
SYNE2-209ENST00000553308 INTS11Q5TA45 600 aaKnown RBP7.54□□□□□ -1.2
SYNE2-209ENST00000553308 ZNF841Q6ZN19 808 aa7.54□□□□□ -1.2
SYNE2-209ENST00000553308 DPP10Q8N608 796 aa7.54□□□□□ -1.2
SYNE2-209ENST00000553308 BHLHE23Q8NDY6 225 aa7.54□□□□□ -1.2
SYNE2-209ENST00000553308 OR8G5Q8NG78 346 aa7.54□□□□□ -1.2
SYNE2-209ENST00000553308 OR13G1Q8NGZ3 307 aa7.54□□□□□ -1.2
SYNE2-209ENST00000553308 FNDC8Q8TC99 324 aa7.54□□□□□ -1.2
SYNE2-209ENST00000553308 RASSF5Q8WWW0 418 aa7.54□□□□□ -1.2
SYNE2-209ENST00000553308 DYRK2Q92630 601 aa7.54□□□□□ -1.2
SYNE2-209ENST00000553308 PTP4A1Q93096 173 aa7.54□□□□□ -1.2
SYNE2-209ENST00000553308 C7orf26Q96N11 449 aa7.54□□□□□ -1.2
SYNE2-209ENST00000553308 TBX15Q96SF7 602 aa7.54□□□□□ -1.2
SYNE2-209ENST00000553308 CCDC28BQ9BUN5 200 aa7.54□□□□□ -1.2
SYNE2-209ENST00000553308 PARD6BQ9BYG5 372 aa7.54□□□□□ -1.2
SYNE2-209ENST00000553308 CTSZQ9UBR2 303 aa7.54□□□□□ -1.2
SYNE2-209ENST00000553308 DOCK11Q5JSL3 2073 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 OR6C6A6NF89 314 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 A6NIZ1 184 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 LRRC30A6NM36 301 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 ZNF879B4DU55 563 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 P2RY10O00398 339 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 FBP2O00757 339 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 TOX4O94842 621 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 FSTL3O95633 263 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 PRB2P02812 416 aaPredicted RBP7.53□□□□□ -1.2
SYNE2-209ENST00000553308 HLA-DPB1P04440 258 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 GZMMP51124 257 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 RAP1BP61224 184 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 RAP1AP62834 184 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 AQP6Q13520 282 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 FHL1Q13642 323 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 NFYCQ13952 458 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 FBXW12Q6X9E4 464 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 DCDC5Q6ZRR9 648 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 Q6ZSV7 163 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 CCDC80Q76M96 950 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 CROCCP2Q86T23 111 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 C1orf87Q8N0U7 546 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 OR13C2Q8NGS9 318 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 OR51A7Q8NH64 312 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 TBC1D15Q8TC07 691 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 GATAD2BQ8WXI9 593 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 BPIFA2Q96DR5 249 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 MAGEB18Q96M61 343 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 COG8Q96MW5 612 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 ZNF582Q96NG8 517 aaPredicted RBP7.53□□□□□ -1.2
SYNE2-209ENST00000553308 TECTBQ96PL2 329 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 WACQ9BTA9 647 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 POLR2J2Q9GZM3 115 aaKnown RBP7.53□□□□□ -1.2
SYNE2-209ENST00000553308 POLR2J3Q9H1A7 115 aaKnown RBP7.53□□□□□ -1.2
SYNE2-209ENST00000553308 WDR76Q9H967 626 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 ACOXLQ9NUZ1 547 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 TMCC3Q9ULS5 477 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 NDUFAF1Q9Y375 327 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 ADAM18Q9Y3Q7 739 aa7.53□□□□□ -1.2
SYNE2-209ENST00000553308 IGHV1-69DA0A0B4J2H0 117 aa7.52□□□□□ -1.21
SYNE2-209ENST00000553308 A0A0U1RQK1 487 aa7.52□□□□□ -1.21
SYNE2-209ENST00000553308 IQCF6A8MYZ5 107 aa7.52□□□□□ -1.21
SYNE2-209ENST00000553308 C3orf80F5H4A9 247 aa7.52□□□□□ -1.21
SYNE2-209ENST00000553308 G3V4G9 280 aa7.52□□□□□ -1.21
SYNE2-209ENST00000553308 J3QW42 95 aa7.52□□□□□ -1.21
SYNE2-209ENST00000553308 ANGPT2O15123 496 aa7.52□□□□□ -1.21
SYNE2-209ENST00000553308 RER1O15258 196 aa7.52□□□□□ -1.21
SYNE2-209ENST00000553308 FAM20BO75063 409 aa7.52□□□□□ -1.21
SYNE2-209ENST00000553308 IGHV1-69P01742 117 aa7.52□□□□□ -1.21
SYNE2-209ENST00000553308 CTLA4P16410 223 aa7.52□□□□□ -1.21
SYNE2-209ENST00000553308 PSMB10P40306 273 aa7.52□□□□□ -1.21
SYNE2-209ENST00000553308 GATA4P43694 442 aa7.52□□□□□ -1.21
SYNE2-209ENST00000553308 IER3P46695 156 aa7.52□□□□□ -1.21
SYNE2-209ENST00000553308 MAB21L1Q13394 359 aa7.52□□□□□ -1.21
SYNE2-209ENST00000553308 C2orf68Q2NKX9 166 aa7.52□□□□□ -1.21
SYNE2-209ENST00000553308 BEAN1Q3B7T3 259 aa7.52□□□□□ -1.21
SYNE2-209ENST00000553308 CCDC92Q53HC0 331 aaPredicted RBP7.52□□□□□ -1.21
SYNE2-209ENST00000553308 MESTQ5EB52 335 aa7.52□□□□□ -1.21
SYNE2-209ENST00000553308 CLEC12AQ5QGZ9 265 aa7.52□□□□□ -1.21
SYNE2-209ENST00000553308 PRAMEF6Q5VXH4 476 aa7.52□□□□□ -1.21
SYNE2-209ENST00000553308 Q6ZPA2 131 aa7.52□□□□□ -1.21
SYNE2-209ENST00000553308 LDLRAD3Q86YD5 345 aa7.52□□□□□ -1.21
SYNE2-209ENST00000553308 PCYOX1LQ8NBM8 494 aa7.52□□□□□ -1.21
SYNE2-209ENST00000553308 OR1F12Q8NHA8 337 aa7.52□□□□□ -1.21
SYNE2-209ENST00000553308 LRRC8CQ8TDW0 803 aa7.52□□□□□ -1.21
SYNE2-209ENST00000553308 LHX4Q969G2 390 aa7.52□□□□□ -1.21
SYNE2-209ENST00000553308 TLCD1Q96CP7 247 aa7.52□□□□□ -1.21
SYNE2-209ENST00000553308 RASD2Q96D21 266 aa7.52□□□□□ -1.21
SYNE2-209ENST00000553308 Q96M85 177 aa7.52□□□□□ -1.21
SYNE2-209ENST00000553308 WDFY2Q96P53 400 aa7.52□□□□□ -1.21
SYNE2-209ENST00000553308 MMADHCQ9H3L0 296 aaPredicted RBP7.52□□□□□ -1.21
SYNE2-209ENST00000553308 SMURF1Q9HCE7 757 aa7.52□□□□□ -1.21
SYNE2-209ENST00000553308 UFSP2Q9NUQ7 469 aa7.52□□□□□ -1.21
SYNE2-209ENST00000553308 KIF17Q9P2E2 1029 aa7.52□□□□□ -1.21
SYNE2-209ENST00000553308 BAG5Q9UL15 447 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms