RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 NSUN5P1Q3KNT7 163 aa10.62□□□□□ -0.71
VPS29-211ENST00000553128 CLEC12AQ5QGZ9 265 aa10.62□□□□□ -0.71
VPS29-211ENST00000553128 SFRP4Q6FHJ7 346 aaPredicted RBP10.62□□□□□ -0.71
VPS29-211ENST00000553128 SLC30A8Q8IWU4 369 aa10.62□□□□□ -0.71
VPS29-211ENST00000553128 FGFRL1Q8N441 504 aa10.62□□□□□ -0.71
VPS29-211ENST00000553128 KLHDC1Q8N7A1 406 aa10.62□□□□□ -0.71
VPS29-211ENST00000553128 GOLGA6L1Q8N7Z2 621 aa10.62□□□□□ -0.71
VPS29-211ENST00000553128 BHLHE23Q8NDY6 225 aa10.62□□□□□ -0.71
VPS29-211ENST00000553128 OR13G1Q8NGZ3 307 aa10.62□□□□□ -0.71
VPS29-211ENST00000553128 MMP28Q9H239 520 aa10.62□□□□□ -0.71
VPS29-211ENST00000553128 VAPAQ9P0L0 249 aa10.62□□□□□ -0.71
VPS29-211ENST00000553128 FAM96BQ9Y3D0 163 aa10.62□□□□□ -0.71
VPS29-211ENST00000553128 A0A1W2PRD5 423 aa10.61□□□□□ -0.71
VPS29-211ENST00000553128 A0A1W2PRF3 423 aa10.61□□□□□ -0.71
VPS29-211ENST00000553128 A0A1W2PRM7 423 aa10.61□□□□□ -0.71
VPS29-211ENST00000553128 TRAPPC13A5PLN9 417 aa10.61□□□□□ -0.71
VPS29-211ENST00000553128 ANKRD61A6NGH8 418 aa10.61□□□□□ -0.71
VPS29-211ENST00000553128 OR10H3O60404 316 aa10.61□□□□□ -0.71
VPS29-211ENST00000553128 FAM20BO75063 409 aa10.61□□□□□ -0.71
VPS29-211ENST00000553128 SERPINB7O75635 380 aa10.61□□□□□ -0.71
VPS29-211ENST00000553128 OR7A10O76100 309 aa10.61□□□□□ -0.71
VPS29-211ENST00000553128 LIPFP07098 398 aa10.61□□□□□ -0.71
VPS29-211ENST00000553128 DBHP09172 617 aa10.61□□□□□ -0.71
VPS29-211ENST00000553128 TSPAN19P0C672 248 aa10.61□□□□□ -0.71
VPS29-211ENST00000553128 KITP10721 976 aa10.61□□□□□ -0.71
VPS29-211ENST00000553128 TUBG1P23258 451 aa10.61□□□□□ -0.71
VPS29-211ENST00000553128 NPY4RP50391 375 aa10.61□□□□□ -0.71
VPS29-211ENST00000553128 MPP2Q14168 576 aa10.61□□□□□ -0.71
VPS29-211ENST00000553128 MPPED2Q15777 294 aa10.61□□□□□ -0.71
VPS29-211ENST00000553128 PRAMEF6Q5VXH4 476 aa10.61□□□□□ -0.71
VPS29-211ENST00000553128 CD276Q5ZPR3 534 aa10.61□□□□□ -0.71
VPS29-211ENST00000553128 MAVSQ7Z434 540 aa10.61□□□□□ -0.71
VPS29-211ENST00000553128 HDDC2Q7Z4H3 204 aa10.61□□□□□ -0.71
VPS29-211ENST00000553128 VMO1Q7Z5L0 202 aa10.61□□□□□ -0.71
VPS29-211ENST00000553128 NKAIN4Q8IVV8 208 aa10.61□□□□□ -0.71
VPS29-211ENST00000553128 C1orf87Q8N0U7 546 aa10.61□□□□□ -0.71
VPS29-211ENST00000553128 GALNT4Q8N4A0 578 aa10.61□□□□□ -0.71
VPS29-211ENST00000553128 WWC2-AS2Q96NR7 200 aa10.61□□□□□ -0.71
VPS29-211ENST00000553128 OR52B2Q96RD2 323 aa10.61□□□□□ -0.71
VPS29-211ENST00000553128 TMEM38AQ9H6F2 299 aa10.61□□□□□ -0.71
VPS29-211ENST00000553128 WDR76Q9H967 626 aa10.61□□□□□ -0.71
VPS29-211ENST00000553128 POLE4Q9NR33 117 aa10.61□□□□□ -0.71
VPS29-211ENST00000553128 TUBG2Q9NRH3 451 aa10.61□□□□□ -0.71
VPS29-211ENST00000553128 UFSP2Q9NUQ7 469 aa10.61□□□□□ -0.71
VPS29-211ENST00000553128 DNAJB11Q9UBS4 358 aa10.61□□□□□ -0.71
VPS29-211ENST00000553128 DNAH1Q9P2D7 4330 aa10.6□□□□□ -0.71
VPS29-211ENST00000553128 C12orf71A8MTZ7 269 aa10.6□□□□□ -0.71
VPS29-211ENST00000553128 H7C1C5 153 aa10.6□□□□□ -0.71
VPS29-211ENST00000553128 HDAC3O15379 428 aa10.6□□□□□ -0.71
VPS29-211ENST00000553128 ADAM20O43506 726 aa10.6□□□□□ -0.71
VPS29-211ENST00000553128 XPNPEP2O43895 674 aa10.6□□□□□ -0.71
VPS29-211ENST00000553128 MT-ND1P03886 318 aa10.6□□□□□ -0.71
VPS29-211ENST00000553128 COX5BP10606 129 aa10.6□□□□□ -0.71
VPS29-211ENST00000553128 MSR1P21757 451 aa10.6□□□□□ -0.71
VPS29-211ENST00000553128 LCN6P62502 163 aa10.6□□□□□ -0.71
VPS29-211ENST00000553128 PAGE3Q5JUK9 113 aa10.6□□□□□ -0.71
VPS29-211ENST00000553128 LRIF1Q5T3J3 769 aa10.6□□□□□ -0.71
VPS29-211ENST00000553128 FBXW12Q6X9E4 464 aa10.6□□□□□ -0.71
VPS29-211ENST00000553128 BTN2A1Q7KYR7 527 aa10.6□□□□□ -0.71
VPS29-211ENST00000553128 SYT9Q86SS6 491 aa10.6□□□□□ -0.71
VPS29-211ENST00000553128 IGFN1Q86VF2 1251 aa10.6□□□□□ -0.71
VPS29-211ENST00000553128 PNKDQ8N490 385 aa10.6□□□□□ -0.71
VPS29-211ENST00000553128 PNLDC1Q8NA58 520 aaKnown RBP10.6□□□□□ -0.71
VPS29-211ENST00000553128 TMEM255BQ8WV15 326 aa10.6□□□□□ -0.71
VPS29-211ENST00000553128 MPP4Q96JB8 637 aa10.6□□□□□ -0.71
VPS29-211ENST00000553128 MAELQ96JY0 434 aaKnown RBP10.6□□□□□ -0.71
VPS29-211ENST00000553128 ZNF582Q96NG8 517 aaPredicted RBP10.6□□□□□ -0.71
VPS29-211ENST00000553128 ALG12Q9BV10 488 aa10.6□□□□□ -0.71
VPS29-211ENST00000553128 TXNIPQ9H3M7 391 aa10.6□□□□□ -0.71
VPS29-211ENST00000553128 ERVK-18Q9QC07 812 aa10.6□□□□□ -0.71
VPS29-211ENST00000553128 DNAH7Q8WXX0 4024 aa10.6□□□□□ -0.71
VPS29-211ENST00000553128 TRBV5-3A0A0A0MS03 114 aa10.59□□□□□ -0.71
VPS29-211ENST00000553128 A0A1B0GWJ7 208 aa10.59□□□□□ -0.71
VPS29-211ENST00000553128 ELOVL7A1L3X0 281 aa10.59□□□□□ -0.71
VPS29-211ENST00000553128 MEGF11A6BM72 1044 aa10.59□□□□□ -0.71
VPS29-211ENST00000553128 BTBD17A6NE02 478 aa10.59□□□□□ -0.71
VPS29-211ENST00000553128 RNASEK-C17orf49H0YIS7 233 aa10.59□□□□□ -0.71
VPS29-211ENST00000553128 SGCEO43556 437 aa10.59□□□□□ -0.71
VPS29-211ENST00000553128 FBP1P09467 338 aa10.59□□□□□ -0.71
VPS29-211ENST00000553128 IRF2P14316 349 aa10.59□□□□□ -0.71
VPS29-211ENST00000553128 IGLL1P15814 213 aa10.59□□□□□ -0.71
VPS29-211ENST00000553128 GATA4P43694 442 aa10.59□□□□□ -0.71
VPS29-211ENST00000553128 RAD23AP54725 363 aa10.59□□□□□ -0.71
VPS29-211ENST00000553128 IFFO1Q0D2I5 559 aa10.59□□□□□ -0.71
VPS29-211ENST00000553128 ZBTB37Q5TC79 503 aa10.59□□□□□ -0.71
VPS29-211ENST00000553128 EIF1ADQ8N9N8 165 aaKnown RBP10.59□□□□□ -0.71
VPS29-211ENST00000553128 BOLLQ8N9W6 283 aaKnown RBP10.59□□□□□ -0.71
VPS29-211ENST00000553128 Q8TCH9 128 aa10.59□□□□□ -0.71
VPS29-211ENST00000553128 SGTBQ96EQ0 304 aa10.59□□□□□ -0.71
VPS29-211ENST00000553128 RBP7Q96R05 134 aa10.59□□□□□ -0.71
VPS29-211ENST00000553128 EVA1AQ9H8M9 152 aa10.59□□□□□ -0.71
VPS29-211ENST00000553128 STX18Q9P2W9 335 aaKnown RBP10.59□□□□□ -0.71
VPS29-211ENST00000553128 A0A1B0GW55 424 aa10.58□□□□□ -0.72
VPS29-211ENST00000553128 OR6C6A6NF89 314 aa10.58□□□□□ -0.72
VPS29-211ENST00000553128 NPIPB13A6NJU9 1138 aa10.58□□□□□ -0.72
VPS29-211ENST00000553128 TRPC5OSA6NMA1 111 aa10.58□□□□□ -0.72
VPS29-211ENST00000553128 ADARB2-AS1A8MUL3 147 aa10.58□□□□□ -0.72
VPS29-211ENST00000553128 IQCF6A8MYZ5 107 aa10.58□□□□□ -0.72
VPS29-211ENST00000553128 NPIPB4C9JG80 1138 aa10.58□□□□□ -0.72
VPS29-211ENST00000553128 M0QX08 132 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms