RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 NAB1Q13506 487 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 GNA13Q14344 377 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 MFSD13AQ14CX5 517 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 KCNJ8Q15842 424 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 IMPG1Q17R60 797 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 SLC36A2Q495M3 483 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 SPDYE7PQ495Y7 208 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 ATP6AP1LQ52LC2 224 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 XKR7Q5GH72 579 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 ATAD3BQ5T9A4 648 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 IL23RQ5VWK5 629 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 WDR25Q64LD2 544 aaPredicted RBP4.23□□□□□ -1.73
CKAP4-203ENST00000553039 KCTD18Q6PI47 426 aaPredicted RBP4.23□□□□□ -1.73
CKAP4-203ENST00000553039 ARL9Q6T311 187 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 NET1Q7Z628 596 aaPredicted RBP4.23□□□□□ -1.73
CKAP4-203ENST00000553039 CTAGE3PQ8IX95 158 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 C20orf196Q8IYI0 205 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 C1orf87Q8N0U7 546 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 NATD1Q8N6N6 113 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 OR6N1Q8NGY5 312 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 MFSD8Q8NHS3 518 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 GEMIN6Q8WXD5 167 aaKnown RBP4.23□□□□□ -1.73
CKAP4-203ENST00000553039 NPIPB3Q92617 1050 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 TLCD1Q96CP7 247 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 OTUB1Q96FW1 271 aaPredicted RBP4.23□□□□□ -1.73
CKAP4-203ENST00000553039 ZNF764Q96H86 408 aaPredicted RBP4.23□□□□□ -1.73
CKAP4-203ENST00000553039 PAFAH2Q99487 392 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 ARHGDIGQ99819 225 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 ACPTQ9BZG2 426 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 KCNN2Q9H2S1 579 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 OR51B6Q9H340 312 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 REEP4Q9H6H4 257 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 TUBG2Q9NRH3 451 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 EXD2Q9NVH0 621 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 STK38LQ9Y2H1 464 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 LSM4Q9Y4Z0 139 aaKnown RBP4.23□□□□□ -1.73
CKAP4-203ENST00000553039 CMYA5Q8N3K9 4069 aa4.23□□□□□ -1.73
CKAP4-203ENST00000553039 A0A1B0GVI7 797 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 A0A1W2PQ09 198 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 ZAR1LA6NP61 321 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 A8MZ25 164 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 H3BSA7 217 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 FAAHO00519 579 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 OR2T1O43869 369 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 FCMRO60667 390 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 SEC22BO75396 215 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 UGT2B17O75795 530 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 OR2C1O95371 312 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 ALDOBP05062 364 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 ENO1P06733 434 aaKnown RBP4.22□□□□□ -1.73
CKAP4-203ENST00000553039 SPARCP09486 303 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 MMP9P14780 707 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 MATN1P21941 496 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 CCNOP22674 350 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 FRKP42685 505 aaPredicted RBP4.22□□□□□ -1.73
CKAP4-203ENST00000553039 P2RY4P51582 365 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 ARHGDIAP52565 204 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 ERVS71-1P61550 626 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 UFM1P61960 85 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 ARF6P62330 175 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 IRF3Q14653 427 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 TNFAIP8L3Q5GJ75 292 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 MTX3Q5HYI7 312 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 C1orf140Q5VVS0 124 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 C16orf62Q7Z3J2 963 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 CMC1Q7Z7K0 106 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 SKA3Q8IX90 412 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 ZNF440Q8IYI8 595 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 OR8H3Q8N146 312 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 KDM8Q8N371 416 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 OR2Z1Q8NG97 314 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 OR8H1Q8NGG4 311 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 KLF14Q8TD94 323 aaPredicted RBP4.22□□□□□ -1.73
CKAP4-203ENST00000553039 ZNF483Q8TF39 744 aaPredicted RBP4.22□□□□□ -1.73
CKAP4-203ENST00000553039 GATAD1Q8WUU5 269 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 CIDECQ96AQ7 238 aaPredicted RBP4.22□□□□□ -1.73
CKAP4-203ENST00000553039 SLC25A36Q96CQ1 311 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 MTERF3Q96E29 417 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 RNFT2Q96EX2 444 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 TMEM237Q96Q45 408 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 OR2M2Q96R28 347 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 DDOQ99489 341 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 TMEM246Q9BRR3 403 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 DPY30Q9C005 99 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 ELOVL3Q9HB03 270 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 TCF7L2Q9NQB0 619 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 NANSQ9NR45 359 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 POLE3Q9NRF9 147 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 ZNRD1Q9P1U0 126 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 MKLN1Q9UL63 735 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 KCNE3Q9Y6H6 103 aa4.22□□□□□ -1.73
CKAP4-203ENST00000553039 TCRBV4S1A1TA0A5B7 111 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 TMEM120BA0PK00 339 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 CFAP73A6NFT4 308 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 ZSCAN5BA6NJL1 495 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 FAM159BA6NKW6 160 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 SLC28A1O00337 649 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 AIM2O14862 343 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 NDUFA2O43678 99 aa4.21□□□□□ -1.74
CKAP4-203ENST00000553039 TIMM8AO60220 97 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms