RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 SLC41A2Q96JW4 573 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 MMP25Q9NPA2 562 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 PRR13Q9NZ81 148 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 MKL2Q9ULH7 1088 aa11.11□□□□□ -0.63
HDAC7-230ENST00000552960 CDC14CA4D256 554 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 TNFRSF10CO14798 259 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 GNALP38405 381 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 NPBWR1P48145 328 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 CSNK1EP49674 416 aaKnown RBP11.1□□□□□ -0.63
HDAC7-230ENST00000552960 POLR2GP62487 172 aaKnown RBP eCLIP11.1□□□□□ -0.63
HDAC7-230ENST00000552960 YPEL5P62699 121 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 HFEQ30201 348 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 TMEM225Q6GV28 225 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 MED25Q71SY5 747 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 FAM122BQ7Z309 247 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 SLC43A2Q8N370 569 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 KDM8Q8N371 416 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 OR13C8Q8NGS7 320 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 ELP5Q8TE02 316 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 MCHR2Q969V1 340 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 KLHDC7BQ96G42 594 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 VSTM2LQ96N03 204 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 DGAT2Q96PD7 388 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 G6PC3Q9BUM1 346 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 POLE3Q9NRF9 147 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 CSAG2Q9Y5P2 127 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 TMEM14AQ9Y6G1 99 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 TRBV23-1A0A0A0MS06 115 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 TGFBR3LH3BV60 316 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 PDGFBP01127 241 aaPredicted RBP11.1□□□□□ -0.63
HDAC7-230ENST00000552960 IFNA6P05013 189 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 ERCC1P07992 297 aaPredicted RBP11.1□□□□□ -0.63
HDAC7-230ENST00000552960 CT45A8P0DMV1 189 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 CT45A9P0DMV2 189 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 TACR3P29371 465 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 SNRPEP62304 92 aaKnown RBP11.1□□□□□ -0.63
HDAC7-230ENST00000552960 MFGE8Q08431 387 aaPredicted RBP11.1□□□□□ -0.63
HDAC7-230ENST00000552960 PDZK1IP1Q13113 114 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 CT45A2Q5DJT8 189 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 NKAPLQ5M9Q1 402 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 TMEM200AQ86VY9 491 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 RPS4Y2Q8TD47 263 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 PHB2Q99623 299 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 NIT2Q9NQR4 276 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 KLK13Q9UKR3 277 aa11.1□□□□□ -0.63
HDAC7-230ENST00000552960 LMX1BO60663 402 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 IGLV3-19P01714 112 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 CRYBA1P05813 215 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 S1PR1P21453 382 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 AKR1C3P42330 323 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 EIF1AXP47813 144 aaKnown RBP11.09□□□□□ -0.63
HDAC7-230ENST00000552960 RPS4XP62701 263 aaKnown RBP11.09□□□□□ -0.63
HDAC7-230ENST00000552960 HHEXQ03014 270 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 ELOCQ15369 112 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 INPP5JQ15735 1006 aaPredicted RBP11.09□□□□□ -0.63
HDAC7-230ENST00000552960 DEFB133Q30KQ1 61 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 TRAPPC6BQ86SZ2 158 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 ADAD2Q8NCV1 583 aaKnown RBP11.09□□□□□ -0.63
HDAC7-230ENST00000552960 OR13C3Q8NGS6 347 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 ROBO4Q8WZ75 1007 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 TAAR8Q969N4 342 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 FOXRED1Q96CU9 486 aaPredicted RBP11.09□□□□□ -0.63
HDAC7-230ENST00000552960 GAL3ST4Q96RP7 486 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 CENPMQ9NSP4 180 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 HIF3AQ9Y2N7 669 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 EMC9Q9Y3B6 208 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 LRP4O75096 1905 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 MPZL1O95297 269 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 PI3P19957 117 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 WBP2NLQ6ICG8 309 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 CORO6Q6QEF8 472 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 RBMS3Q6XE24 437 aaKnown RBP11.09□□□□□ -0.63
HDAC7-230ENST00000552960 DNM1P46Q6ZS02 220 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 TMPPEQ6ZT21 453 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 OOSP2Q86WS3 158 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 ZSCAN1Q8NBB4 408 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 TMEM229BQ8NBD8 167 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 ZNF524Q96C55 264 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 CNTNAP3BQ96NU0 1288 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 FAM117AQ9C073 453 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 CHMP1AQ9HD42 196 aaPredicted RBP11.09□□□□□ -0.63
HDAC7-230ENST00000552960 MED12Q93074 2177 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 PCDH15Q96QU1 1955 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 SULT2B1O00204 365 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 HCRTR2O43614 444 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 OR2T1O43869 369 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 S100A9P06702 114 aaKnown RBP11.09□□□□□ -0.63
HDAC7-230ENST00000552960 ST6GAL1P15907 406 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 SLC25A1P53007 311 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 EGR4Q05215 589 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 SLC17A1Q14916 467 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 DEFB123Q8N688 67 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 OTOSQ8NHW6 89 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 LMX1AQ8TE12 382 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 ARL11Q969Q4 196 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 ADOQ96SZ5 270 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 ALX4Q9H161 411 aaPredicted RBP11.09□□□□□ -0.63
HDAC7-230ENST00000552960 OR10A5Q9H207 317 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 COA4Q9NYJ1 87 aa11.09□□□□□ -0.63
HDAC7-230ENST00000552960 ATXN7L1Q9ULK2 861 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms