RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 ABHD16AO95870 558 aa19.35■□□□□ 0.69
BRF1-216ENST00000550208 CLPTM1O96005 669 aa19.35■□□□□ 0.69
BRF1-216ENST00000550208 SNRPD2P62316 118 aaKnown RBP19.35■□□□□ 0.69
BRF1-216ENST00000550208 ECH1Q13011 328 aa19.35■□□□□ 0.69
BRF1-216ENST00000550208 EIF2B1Q14232 305 aaKnown RBP19.35■□□□□ 0.69
BRF1-216ENST00000550208 TRIP10Q15642 601 aa19.35■□□□□ 0.69
BRF1-216ENST00000550208 LRRC36Q1X8D7 754 aa19.35■□□□□ 0.69
BRF1-216ENST00000550208 KRTAP27-1Q3LI81 207 aa19.35■□□□□ 0.69
BRF1-216ENST00000550208 SPATA46Q5T0L3 261 aa19.35■□□□□ 0.69
BRF1-216ENST00000550208 ARL9Q6T311 187 aa19.35■□□□□ 0.69
BRF1-216ENST00000550208 GALNT4Q8N4A0 578 aa19.35■□□□□ 0.69
BRF1-216ENST00000550208 SLC25A40Q8TBP6 338 aa19.35■□□□□ 0.69
BRF1-216ENST00000550208 HRASLS5Q96KN8 279 aa19.35■□□□□ 0.69
BRF1-216ENST00000550208 DCLRE1CQ96SD1 692 aaKnown RBP19.35■□□□□ 0.69
BRF1-216ENST00000550208 ATF6BQ99941 703 aa19.35■□□□□ 0.69
BRF1-216ENST00000550208 CENPMQ9NSP4 180 aa19.35■□□□□ 0.69
BRF1-216ENST00000550208 TBCCD1Q9NVR7 557 aa19.35■□□□□ 0.69
BRF1-216ENST00000550208 MYEF2Q9P2K5 600 aaKnown RBP19.35■□□□□ 0.69
BRF1-216ENST00000550208 STARD10Q9Y365 291 aa19.35■□□□□ 0.69
BRF1-216ENST00000550208 ARFGEF3Q5TH69 2177 aa19.34■□□□□ 0.69
BRF1-216ENST00000550208 F5H5K5 113 aa19.34■□□□□ 0.69
BRF1-216ENST00000550208 BMP4P12644 408 aa19.34■□□□□ 0.69
BRF1-216ENST00000550208 ZNF250P15622 560 aa19.34■□□□□ 0.69
BRF1-216ENST00000550208 EVX1P49640 407 aa19.34■□□□□ 0.69
BRF1-216ENST00000550208 PPP1CBP62140 327 aa19.34■□□□□ 0.69
BRF1-216ENST00000550208 SPATC1Q76KD6 591 aa19.34■□□□□ 0.69
BRF1-216ENST00000550208 MEPCEQ7L2J0 689 aaKnown RBP19.34■□□□□ 0.69
BRF1-216ENST00000550208 SHFQ7M4L6 423 aa19.34■□□□□ 0.69
BRF1-216ENST00000550208 NAA40Q86UY6 237 aa19.34■□□□□ 0.69
BRF1-216ENST00000550208 KRTAP1-3Q8IUG1 177 aa19.34■□□□□ 0.69
BRF1-216ENST00000550208 SYNPRQ8TBG9 265 aa19.34■□□□□ 0.69
BRF1-216ENST00000550208 ST7LQ8TDW4 575 aa19.34■□□□□ 0.69
BRF1-216ENST00000550208 SLAMF6Q96DU3 332 aa19.34■□□□□ 0.69
BRF1-216ENST00000550208 MARS2Q96GW9 593 aaKnown RBP19.34■□□□□ 0.69
BRF1-216ENST00000550208 OR2J1Q9GZK6 312 aa19.34■□□□□ 0.69
BRF1-216ENST00000550208 POFUT1Q9H488 388 aa19.34■□□□□ 0.69
BRF1-216ENST00000550208 IGHV4-39P01824 125 aa19.33■□□□□ 0.68
BRF1-216ENST00000550208 NAA10P41227 235 aaPredicted RBP19.33■□□□□ 0.68
BRF1-216ENST00000550208 HCCSP53701 268 aa19.33■□□□□ 0.68
BRF1-216ENST00000550208 CDC42P60953 191 aa19.33■□□□□ 0.68
BRF1-216ENST00000550208 ZNF718Q3SXZ3 478 aa19.33■□□□□ 0.68
BRF1-216ENST00000550208 NXNL2Q5VZ03 156 aa19.33■□□□□ 0.68
BRF1-216ENST00000550208 UNQ6126/PRO20091Q6UXV3 157 aa19.33■□□□□ 0.68
BRF1-216ENST00000550208 ZCCHC24Q8N2G6 241 aaKnown RBP19.33■□□□□ 0.68
BRF1-216ENST00000550208 OR8J1Q8NGP2 316 aa19.33■□□□□ 0.68
BRF1-216ENST00000550208 AMELYQ99218 206 aa19.33■□□□□ 0.68
BRF1-216ENST00000550208 ABHD6Q9BV23 337 aa19.33■□□□□ 0.68
BRF1-216ENST00000550208 NKX1-2Q9UD57 310 aaPredicted RBP19.33■□□□□ 0.68
BRF1-216ENST00000550208 AKAP9Q99996 3911 aa19.32■□□□□ 0.68
BRF1-216ENST00000550208 H7C417 338 aa19.32■□□□□ 0.68
BRF1-216ENST00000550208 DLGAP1O14490 977 aa19.32■□□□□ 0.68
BRF1-216ENST00000550208 ACSM4P0C7M7 580 aa19.32■□□□□ 0.68
BRF1-216ENST00000550208 MPV17P39210 176 aa19.32■□□□□ 0.68
BRF1-216ENST00000550208 MAD2L1BPQ15013 274 aaPredicted RBP19.32■□□□□ 0.68
BRF1-216ENST00000550208 C1orf174Q8IYL3 243 aa19.32■□□□□ 0.68
BRF1-216ENST00000550208 FAM81AQ8TBF8 368 aa19.32■□□□□ 0.68
BRF1-216ENST00000550208 VRK1Q99986 396 aaPredicted RBP19.32■□□□□ 0.68
BRF1-216ENST00000550208 DCLRE1BQ9H816 532 aa19.32■□□□□ 0.68
BRF1-216ENST00000550208 DDX28Q9NUL7 540 aaKnown RBP19.32■□□□□ 0.68
BRF1-216ENST00000550208 TAAR3PQ9P1P4 343 aa19.32■□□□□ 0.68
BRF1-216ENST00000550208 IGLV3-9A0A075B6K5 115 aa19.31■□□□□ 0.68
BRF1-216ENST00000550208 ADRA2AP08913 450 aa19.31■□□□□ 0.68
BRF1-216ENST00000550208 MRPL3P09001 348 aaKnown RBP19.31■□□□□ 0.68
BRF1-216ENST00000550208 PEX2P28328 305 aa19.31■□□□□ 0.68
BRF1-216ENST00000550208 ALDH3B1P43353 468 aa19.31■□□□□ 0.68
BRF1-216ENST00000550208 KLF3P57682 345 aaPredicted RBP19.31■□□□□ 0.68
BRF1-216ENST00000550208 SELENOVP59797 346 aa19.31■□□□□ 0.68
BRF1-216ENST00000550208 TAF13Q15543 124 aa19.31■□□□□ 0.68
BRF1-216ENST00000550208 ALKBH6Q3KRA9 238 aa19.31■□□□□ 0.68
BRF1-216ENST00000550208 TMEM255AQ5JRV8 349 aa19.31■□□□□ 0.68
BRF1-216ENST00000550208 Q5PR19 223 aa19.31■□□□□ 0.68
BRF1-216ENST00000550208 LCN1P1Q5VSP4 162 aa19.31■□□□□ 0.68
BRF1-216ENST00000550208 SLC16A9Q7RTY1 509 aa19.31■□□□□ 0.68
BRF1-216ENST00000550208 OTOSQ8NHW6 89 aa19.31■□□□□ 0.68
BRF1-216ENST00000550208 KLF14Q8TD94 323 aaPredicted RBP19.31■□□□□ 0.68
BRF1-216ENST00000550208 THEM6Q8WUY1 208 aa19.31■□□□□ 0.68
BRF1-216ENST00000550208 FAM118AQ9NWS6 357 aa19.31■□□□□ 0.68
BRF1-216ENST00000550208 KLHDC2Q9Y2U9 406 aa19.31■□□□□ 0.68
BRF1-216ENST00000550208 GMPPBQ9Y5P6 360 aa19.31■□□□□ 0.68
BRF1-216ENST00000550208 A0A1W2PPW3 197 aa19.3■□□□□ 0.68
BRF1-216ENST00000550208 GCH1P30793 250 aa19.3■□□□□ 0.68
BRF1-216ENST00000550208 RGS6P49758 472 aa19.3■□□□□ 0.68
BRF1-216ENST00000550208 PPOXP50336 477 aa19.3■□□□□ 0.68
BRF1-216ENST00000550208 PRKXP51817 358 aa19.3■□□□□ 0.68
BRF1-216ENST00000550208 TPTEP56180 551 aa19.3■□□□□ 0.68
BRF1-216ENST00000550208 SHEQ5VZ18 495 aa19.3■□□□□ 0.68
BRF1-216ENST00000550208 MBNL2Q5VZF2 373 aaKnown RBP19.3■□□□□ 0.68
BRF1-216ENST00000550208 GID4Q8IVV7 300 aa19.3■□□□□ 0.68
BRF1-216ENST00000550208 WFDC11Q8NEX6 87 aa19.3■□□□□ 0.68
BRF1-216ENST00000550208 RNF133Q8WVZ7 376 aa19.3■□□□□ 0.68
BRF1-216ENST00000550208 TRUB1Q8WWH5 349 aaKnown RBP19.3■□□□□ 0.68
BRF1-216ENST00000550208 SPTSSAQ969W0 71 aa19.3■□□□□ 0.68
BRF1-216ENST00000550208 ZNF582Q96NG8 517 aaPredicted RBP19.3■□□□□ 0.68
BRF1-216ENST00000550208 COPS4Q9BT78 406 aa19.3■□□□□ 0.68
BRF1-216ENST00000550208 C1QTNF5Q9BXJ0 243 aa19.3■□□□□ 0.68
BRF1-216ENST00000550208 DYNLRB1Q9NP97 96 aa19.3■□□□□ 0.68
BRF1-216ENST00000550208 IMPAD1Q9NX62 359 aa19.3■□□□□ 0.68
BRF1-216ENST00000550208 DNAJC27Q9NZQ0 273 aa19.3■□□□□ 0.68
BRF1-216ENST00000550208 AASSQ9UDR5 926 aa19.3■□□□□ 0.68
BRF1-216ENST00000550208 OTOGQ6ZRI0 2925 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms