RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 ZNF107Q9UII5 783 aaPredicted RBP12.31□□□□□ -0.44
HDAC7-228ENST00000548938 LRP12Q9Y561 859 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 SLC16A7O60669 478 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 ERCC1P07992 297 aaPredicted RBP12.31□□□□□ -0.44
HDAC7-228ENST00000548938 HOXB1P14653 301 aaPredicted RBP12.31□□□□□ -0.44
HDAC7-228ENST00000548938 FSTP19883 344 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 PSMB6P28072 239 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 TNFRSF4P43489 277 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 GPR85P60893 370 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 NKAPLQ5M9Q1 402 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 CHRDL2Q6WN34 429 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 CATSPERDQ86XM0 798 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 BAP18Q8IXM2 172 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 ZSCAN1Q8NBB4 408 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 SLC30A7Q8NEW0 376 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 RXFP4Q8TDU9 374 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 C8orf44Q96CB5 159 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 RRNAD1Q96FB5 475 aaKnown RBP12.31□□□□□ -0.44
HDAC7-228ENST00000548938 CNTNAP3BQ96NU0 1288 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 FN3KRPQ9HA64 309 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 ZFP57Q9NU63 452 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 FAM96BQ9Y3D0 163 aa12.31□□□□□ -0.44
HDAC7-228ENST00000548938 MEX3AA1L020 520 aaKnown RBP12.3□□□□□ -0.44
HDAC7-228ENST00000548938 PRSS44E7EML9 344 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 OR6A2O95222 327 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 SNAPINO95295 136 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 ST6GAL1P15907 406 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 HRH1P35367 487 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 SERPINF1P36955 418 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 DNASE1L1P49184 302 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 AIMP2Q13155 320 aaKnown RBP12.3□□□□□ -0.44
HDAC7-228ENST00000548938 CCINQ13939 588 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 EIF2B1Q14232 305 aaKnown RBP12.3□□□□□ -0.44
HDAC7-228ENST00000548938 MARCH3Q86UD3 253 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 RTN4RL2Q86UN3 420 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 OR13C3Q8NGS6 347 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 METTL21AQ8WXB1 218 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 ASB17Q8WXJ9 295 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 AQP3Q92482 292 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 CPNE2Q96FN4 548 aaPredicted RBP12.3□□□□□ -0.44
HDAC7-228ENST00000548938 PRTFDC1Q9NRG1 225 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 TEX13DA0A0J9YY54 714 aaPredicted RBP12.3□□□□□ -0.44
HDAC7-228ENST00000548938 ZNF264O43296 627 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 WISP1O95388 367 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 APOC1P02654 83 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 RNH1P13489 461 aaKnown RBP12.3□□□□□ -0.44
HDAC7-228ENST00000548938 CTLA4P16410 223 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 ARRB1P49407 418 aaPredicted RBP12.3□□□□□ -0.44
HDAC7-228ENST00000548938 RIDAP52758 137 aaKnown RBP12.3□□□□□ -0.44
HDAC7-228ENST00000548938 INSM1Q01101 510 aaPredicted RBP12.3□□□□□ -0.44
HDAC7-228ENST00000548938 ROM1Q03395 351 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 PDZK1IP1Q13113 114 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 TMEM196Q5HYL7 178 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 AVPI1Q5T686 147 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 ARHGEF39Q8N4T4 335 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 FAM160A2Q8N612 972 aaPredicted RBP12.3□□□□□ -0.44
HDAC7-228ENST00000548938 ZNF615Q8N8J6 731 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 ZDHHC22Q8N966 263 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 ZSCAN4Q8NAM6 433 aaPredicted RBP12.3□□□□□ -0.44
HDAC7-228ENST00000548938 OR10R2Q8NGX6 335 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 SFT2D1Q8WV19 159 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 RNF141Q8WVD5 230 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 ROBO4Q8WZ75 1007 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 MICU1Q9BPX6 476 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 ABHD6Q9BV23 337 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 FANCFQ9NPI8 374 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 CYTL1Q9NRR1 136 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 UBQLN4Q9NRR5 601 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 UQCC1Q9NVA1 299 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 GDF2Q9UK05 429 aaPredicted RBP12.3□□□□□ -0.44
HDAC7-228ENST00000548938 EMC9Q9Y3B6 208 aa12.3□□□□□ -0.44
HDAC7-228ENST00000548938 KIF26BQ2KJY2 2108 aa12.29□□□□□ -0.44
HDAC7-228ENST00000548938 A0A0A6YYH2 397 aa12.29□□□□□ -0.44
HDAC7-228ENST00000548938 LOC107986453A0A1B0GWG9 222 aa12.29□□□□□ -0.44
HDAC7-228ENST00000548938 PRSS37A4D1T9 235 aa12.29□□□□□ -0.44
HDAC7-228ENST00000548938 A6NJ64 397 aa12.29□□□□□ -0.44
HDAC7-228ENST00000548938 RAB27BO00194 218 aa12.29□□□□□ -0.44
HDAC7-228ENST00000548938 EFSO43281 561 aa12.29□□□□□ -0.44
HDAC7-228ENST00000548938 FARS2O95363 451 aaKnown RBP12.29□□□□□ -0.44
HDAC7-228ENST00000548938 CTHP32929 405 aa12.29□□□□□ -0.44
HDAC7-228ENST00000548938 S100A12P80511 92 aa12.29□□□□□ -0.44
HDAC7-228ENST00000548938 MST1LQ2TV78 715 aa12.29□□□□□ -0.44
HDAC7-228ENST00000548938 ZNF260Q3ZCT1 412 aa12.29□□□□□ -0.44
HDAC7-228ENST00000548938 CHST4Q8NCG5 386 aa12.29□□□□□ -0.44
HDAC7-228ENST00000548938 SMRP1Q8NCR6 262 aa12.29□□□□□ -0.44
HDAC7-228ENST00000548938 FAM46BQ96A09 425 aa12.29□□□□□ -0.44
HDAC7-228ENST00000548938 BMFQ96LC9 184 aa12.29□□□□□ -0.44
HDAC7-228ENST00000548938 RTN4RQ9BZR6 473 aa12.29□□□□□ -0.44
HDAC7-228ENST00000548938 ACKR4Q9NPB9 350 aa12.29□□□□□ -0.44
HDAC7-228ENST00000548938 MMP26Q9NRE1 261 aa12.29□□□□□ -0.44
HDAC7-228ENST00000548938 SCDO00767 359 aa12.29□□□□□ -0.44
HDAC7-228ENST00000548938 MPZL1O95297 269 aa12.29□□□□□ -0.44
HDAC7-228ENST00000548938 CLPSP04118 112 aa12.29□□□□□ -0.44
HDAC7-228ENST00000548938 GLAP06280 429 aa12.29□□□□□ -0.44
HDAC7-228ENST00000548938 CD37P11049 281 aa12.29□□□□□ -0.44
HDAC7-228ENST00000548938 NTSR1P30989 418 aa12.29□□□□□ -0.44
HDAC7-228ENST00000548938 FUT7Q11130 342 aa12.29□□□□□ -0.44
HDAC7-228ENST00000548938 ACKR1Q16570 336 aa12.29□□□□□ -0.44
HDAC7-228ENST00000548938 METTL27Q8N6F8 245 aaPredicted RBP12.29□□□□□ -0.44
HDAC7-228ENST00000548938 AVL9Q8NBF6 648 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms