RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 IGHV2OR16-5A0A0B4J2B6 119 aa4.32□□□□□ -1.72
APP-217ENST00000548570 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.32□□□□□ -1.72
APP-217ENST00000548570 TUBAL3A6NHL2 446 aa4.32□□□□□ -1.72
APP-217ENST00000548570 C12orf71A8MTZ7 269 aa4.32□□□□□ -1.72
APP-217ENST00000548570 SHISA9B4DS77 424 aa4.32□□□□□ -1.72
APP-217ENST00000548570 PRSS44E7EML9 344 aa4.32□□□□□ -1.72
APP-217ENST00000548570 E9PI62 339 aa4.32□□□□□ -1.72
APP-217ENST00000548570 PSMD9O00233 223 aa4.32□□□□□ -1.72
APP-217ENST00000548570 MPZL2O60487 215 aa4.32□□□□□ -1.72
APP-217ENST00000548570 LALBAP00709 142 aa4.32□□□□□ -1.72
APP-217ENST00000548570 NGFP01138 241 aa4.32□□□□□ -1.72
APP-217ENST00000548570 HLA-DQA2P01906 255 aa4.32□□□□□ -1.72
APP-217ENST00000548570 MT-ND2P03891 347 aa4.32□□□□□ -1.72
APP-217ENST00000548570 SERPINA5P05154 406 aa4.32□□□□□ -1.72
APP-217ENST00000548570 SPARCP09486 303 aa4.32□□□□□ -1.72
APP-217ENST00000548570 PIPP12273 146 aaPredicted RBP4.32□□□□□ -1.72
APP-217ENST00000548570 NR2C1P13056 603 aa4.32□□□□□ -1.72
APP-217ENST00000548570 PRF1P14222 555 aa4.32□□□□□ -1.72
APP-217ENST00000548570 CD40P25942 277 aa4.32□□□□□ -1.72
APP-217ENST00000548570 APEX1P27695 318 aaKnown RBP4.32□□□□□ -1.72
APP-217ENST00000548570 HSPA13P48723 471 aa4.32□□□□□ -1.72
APP-217ENST00000548570 ZNF83P51522 516 aa4.32□□□□□ -1.72
APP-217ENST00000548570 IDH3GP51553 393 aaPredicted RBP4.32□□□□□ -1.72
APP-217ENST00000548570 BLVRAP53004 296 aa4.32□□□□□ -1.72
APP-217ENST00000548570 CDH15P55291 814 aa4.32□□□□□ -1.72
APP-217ENST00000548570 OR12D2P58182 307 aa4.32□□□□□ -1.72
APP-217ENST00000548570 NANOS3P60323 173 aaKnown RBP4.32□□□□□ -1.72
APP-217ENST00000548570 KRTAP10-9P60411 292 aa4.32□□□□□ -1.72
APP-217ENST00000548570 ERVS71-1P61550 626 aa4.32□□□□□ -1.72
APP-217ENST00000548570 RPS7P62081 194 aaKnown RBP4.32□□□□□ -1.72
APP-217ENST00000548570 NKX6-1P78426 367 aaPredicted RBP4.32□□□□□ -1.72
APP-217ENST00000548570 NAAAQ02083 359 aa4.32□□□□□ -1.72
APP-217ENST00000548570 TGFBR3Q03167 851 aa4.32□□□□□ -1.72
APP-217ENST00000548570 BSPH1Q075Z2 132 aa4.32□□□□□ -1.72
APP-217ENST00000548570 MFGE8Q08431 387 aaPredicted RBP4.32□□□□□ -1.72
APP-217ENST00000548570 AQP6Q13520 282 aa4.32□□□□□ -1.72
APP-217ENST00000548570 DAZAP2Q15038 168 aaPredicted RBP4.32□□□□□ -1.72
APP-217ENST00000548570 GSG1Q2KHT4 349 aa4.32□□□□□ -1.72
APP-217ENST00000548570 SLC36A2Q495M3 483 aa4.32□□□□□ -1.72
APP-217ENST00000548570 CDONQ4KMG0 1287 aa4.32□□□□□ -1.72
APP-217ENST00000548570 ELFN2Q5R3F8 820 aa4.32□□□□□ -1.72
APP-217ENST00000548570 NCMAPQ5T1S8 102 aa4.32□□□□□ -1.72
APP-217ENST00000548570 SP5Q6BEB4 398 aaPredicted RBP4.32□□□□□ -1.72
APP-217ENST00000548570 XAF1Q6GPH4 301 aa4.32□□□□□ -1.72
APP-217ENST00000548570 TMEM154Q6P9G4 183 aa4.32□□□□□ -1.72
APP-217ENST00000548570 LRRN1Q6UXK5 716 aa4.32□□□□□ -1.72
APP-217ENST00000548570 PLEKHG7Q6ZR37 379 aa4.32□□□□□ -1.72
APP-217ENST00000548570 COLCA1Q6ZS62 124 aa4.32□□□□□ -1.72
APP-217ENST00000548570 AHSA2Q719I0 299 aa4.32□□□□□ -1.72
APP-217ENST00000548570 ABHD12BQ7Z5M8 362 aaPredicted RBP4.32□□□□□ -1.72
APP-217ENST00000548570 P2RY8Q86VZ1 359 aa4.32□□□□□ -1.72
APP-217ENST00000548570 SLC35F2Q8IXU6 374 aa4.32□□□□□ -1.72
APP-217ENST00000548570 ZNF101Q8IZC7 436 aa4.32□□□□□ -1.72
APP-217ENST00000548570 SETD9Q8NE22 299 aa4.32□□□□□ -1.72
APP-217ENST00000548570 BPIFB6Q8NFQ5 453 aa4.32□□□□□ -1.72
APP-217ENST00000548570 OR6N2Q8NGY6 317 aa4.32□□□□□ -1.72
APP-217ENST00000548570 OR1F12Q8NHA8 337 aa4.32□□□□□ -1.72
APP-217ENST00000548570 SLAMF6Q96DU3 332 aa4.32□□□□□ -1.72
APP-217ENST00000548570 OR8B4Q96RC9 309 aa4.32□□□□□ -1.72
APP-217ENST00000548570 TBX5Q99593 518 aa4.32□□□□□ -1.72
APP-217ENST00000548570 SOX7Q9BT81 388 aa4.32□□□□□ -1.72
APP-217ENST00000548570 RSRP1Q9BUV0 290 aa4.32□□□□□ -1.72
APP-217ENST00000548570 TEX12Q9BXU0 123 aa4.32□□□□□ -1.72
APP-217ENST00000548570 PRRG3Q9BZD7 231 aa4.32□□□□□ -1.72
APP-217ENST00000548570 YIPF3Q9GZM5 350 aa4.32□□□□□ -1.72
APP-217ENST00000548570 OBP2BQ9NPH6 170 aa4.32□□□□□ -1.72
APP-217ENST00000548570 CLN6Q9NWW5 311 aa4.32□□□□□ -1.72
APP-217ENST00000548570 FAM206AQ9NX38 181 aa4.32□□□□□ -1.72
APP-217ENST00000548570 ERVK13-1Q9NX77 482 aa4.32□□□□□ -1.72
APP-217ENST00000548570 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.32□□□□□ -1.72
APP-217ENST00000548570 DIMT1Q9UNQ2 313 aaKnown RBP4.32□□□□□ -1.72
APP-217ENST00000548570 AMDHD2Q9Y303 409 aa4.32□□□□□ -1.72
APP-217ENST00000548570 LSM2Q9Y333 95 aaKnown RBP4.32□□□□□ -1.72
APP-217ENST00000548570 GRIP1Q9Y3R0 1128 aa4.32□□□□□ -1.72
APP-217ENST00000548570 RPL36Q9Y3U8 105 aaKnown RBP4.32□□□□□ -1.72
APP-217ENST00000548570 TIMM10BQ9Y5J6 103 aa4.32□□□□□ -1.72
APP-217ENST00000548570 SIRT4Q9Y6E7 314 aaPredicted RBP4.32□□□□□ -1.72
APP-217ENST00000548570 GCN1Q92616 2671 aaKnown RBP4.31□□□□□ -1.72
APP-217ENST00000548570 DOPEY1Q5JWR5 2465 aa4.31□□□□□ -1.72
APP-217ENST00000548570 TRIM64CA6NLI5 447 aa4.31□□□□□ -1.72
APP-217ENST00000548570 E7EQL1 145 aa4.31□□□□□ -1.72
APP-217ENST00000548570 PTGES3LE9PB15 166 aa4.31□□□□□ -1.72
APP-217ENST00000548570 ATP6V1G2-DDX39BF2Z307 99 aa4.31□□□□□ -1.72
APP-217ENST00000548570 M0R1B8 84 aa4.31□□□□□ -1.72
APP-217ENST00000548570 SGCEO43556 437 aa4.31□□□□□ -1.72
APP-217ENST00000548570 DOK2O60496 412 aa4.31□□□□□ -1.72
APP-217ENST00000548570 FAM20BO75063 409 aa4.31□□□□□ -1.72
APP-217ENST00000548570 UBL3O95164 117 aa4.31□□□□□ -1.72
APP-217ENST00000548570 FARS2O95363 451 aaKnown RBP4.31□□□□□ -1.72
APP-217ENST00000548570 PTHP01270 115 aa4.31□□□□□ -1.72
APP-217ENST00000548570 IGLV3-1P01715 115 aa4.31□□□□□ -1.72
APP-217ENST00000548570 CDK1P06493 297 aa4.31□□□□□ -1.72
APP-217ENST00000548570 CCDC159P0C7I6 412 aa4.31□□□□□ -1.72
APP-217ENST00000548570 ACSM4P0C7M7 580 aa4.31□□□□□ -1.72
APP-217ENST00000548570 OR2T7P0C7T2 308 aa4.31□□□□□ -1.72
APP-217ENST00000548570 SMIM18P0DKX4 95 aa4.31□□□□□ -1.72
APP-217ENST00000548570 COX5BP10606 129 aa4.31□□□□□ -1.72
APP-217ENST00000548570 SLC2A1P11166 492 aa4.31□□□□□ -1.72
APP-217ENST00000548570 PPP3CBP16298 524 aa4.31□□□□□ -1.72
APP-217ENST00000548570 ZNF823P16415 610 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms